Mycobacterium tuberculosis variant microti: RN08_1408
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Entry
RN08_1408 CDS
T04291
Name
(GenBank) uracil DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mmic
Mycobacterium tuberculosis variant microti
Pathway
mmic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RN08_1408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmic03400
]
RN08_1408
Enzymes [BR:
mmic01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RN08_1408
DNA repair and recombination proteins [BR:
mmic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RN08_1408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AMC58835
LinkDB
All DBs
Position
1410648..1411460
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AA seq
270 aa
AA seq
DB search
MLMHPKTGRAFRSPVEPGSGWPGDPATPQTPVAADAAQVSALAGGAGSICELNALISVCR
ACPRLVSWREEVAVVKRRAFADQPYWGRPVPGWGSKRPRLLILGLAPAAHGANRTGRMFT
GDRSGDQLYAALHRAGLVNSPVSVDAADGLRANRIRITAPVRCAPPGNSPTPAERLTCSP
WLNAEWRLVSDHIRAIVALGGFAWQVALRLAGASGTPKPRFGHGVVTELGAGVRLLGCYH
PSQQNMFTGRLTPTMLDDIFREAKKLAGIE
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgctcatgcatccgaagaccggccgggcgttcaggtccccggtagagcccggttccggc
tggccaggtgatccggcgacaccgcagaccccggtggctgccgatgccgcgcaggtgtca
gcgctggccgggggcgctggctcgatctgcgaactcaacgcgctgatcagcgtgtgccgg
gcgtgtccccggctggtcagttggcgtgaggaggtcgccgtcgtcaagcgccgtgccttc
gccgaccagccctactgggggcgcccggtgccggggtgggggtcgaagcggccgcggttg
ctgatcctcgggctggcgcccgccgcgcacggggccaaccggaccggacgaatgttcacc
ggcgatcggtcgggagatcagctttatgcagcactgcatagggccggcctggtgaactca
ccggtcagcgtcgacgccgcggacgggctgcgggccaaccggattcggatcaccgcaccg
gtgcggtgtgcgcccccgggcaactcgccgacaccggccgagcggctgacatgctcaccc
tggctaaatgcggaatggcggctggtgtccgatcacatccgtgcgatcgtcgccctcggc
gggttcgcctggcaggtcgcgttgcgcctggcgggcgcgtcggggacacccaagccgcgg
ttcggccacggcgtcgttaccgagctgggagccggtgtgcggctactgggctgctaccac
ccgagccagcagaatatgttcaccggtaggttgactcctacgatgctcgacgacattttc
cgtgaggccaagaagctggccgggattgagtga
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