Methanosarcina mazei S-6: MSMAS_3317
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Entry
MSMAS_3317 CDS
T04532
Name
(GenBank) Fe-S OXIDOREDUCTASE Wyeosine biosynthesis
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
mmj
Methanosarcina mazei S-6
Brite
KEGG Orthology (KO) [BR:
mmj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mmj03016
]
MSMAS_3317
Enzymes [BR:
mmj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
MSMAS_3317
Transfer RNA biogenesis [BR:
mmj03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
MSMAS_3317
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
AKB66513
UniProt:
A0A0E3RPE1
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All DBs
Position
complement(4101906..4102931)
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AA seq
341 aa
AA seq
DB search
MPLEEKKKEQENFGENLPEVQEENTGEEQTSLPFDIPDFATLLKKQGYALAGRHSAVKTC
LWLRKAMNDEGFCYKSKFYGVQSHRCLQMTPTLMCNQRCLFCWRPTEVPVPAPGEWDFPE
KIVEESIACQRKLITGFGGSPNALRERWLEGNQPNNVAISLSGEPTFYPYLPELIEEYEK
RGFTTFLVTNGTVPSMLAKVNPSQLYMSLDAPDLETYLRICQPKSPALWDRINESLDIMK
DKSSRTVIRTTLVKGENIFNPEGYAEMIKKASPDFVEIKAYMHLGFSRLRLERSAMPSHE
EVLEFSKELAKHLGYEIADESEISRVVLLSKDGRKSPVKKK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttgaagaaaaaaagaaagaacaggaaaatttcggggaaaaccttcctgaagtc
caggaagaaaacacaggtgaagagcagacttctcttccctttgatatccctgattttgct
acccttcttaaaaagcagggctatgccctggcaggccgccactcggctgtaaagacctgt
ctctggctccggaaagccatgaacgacgaaggcttctgctacaaatcgaaattttacgga
gttcagtcccaccgatgccttcagatgactccaactcttatgtgcaaccagcgctgtctt
ttctgctggcgtcctactgaggttcctgtgcccgcgcccggagaatgggactttcctgaa
aagatagttgaggaaagcattgcctgccagcgcaaattgattacgggtttcggtggctct
ccaaatgcactccgggaacgctggcttgagggcaatcagcccaataatgtcgcaatctca
ctgtccggagagccaacattttacccttaccttccggaactcattgaggaatacgaaaaa
agaggatttactacctttctggtaacaaatggaactgtcccctcgatgctcgcaaaagtt
aatccttcccaattatacatgagccttgacgcccctgaccttgagacctatctcaggatc
tgccagccaaaatctcctgcactctgggacaggataaatgagtccctggacatcatgaag
gataaatcctcgcggacagtcatcagaaccactcttgttaagggtgaaaacatattcaat
ccggaaggttacgccgaaatgattaaaaaagcctcaccggattttgttgaaattaaagcc
tatatgcaccttggtttctcacggcttcgccttgaacgctctgccatgccgtctcatgaa
gaagtgcttgaattttcaaaagaactcgcaaagcacctgggatatgaaattgcagacgaa
tccgaaatcagccgggtagttttgctttcaaaggacggaagaaaatctcctgtaaaaaag
aagtag
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