Marmota marmota marmota (Alpine marmot): 107138319
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Entry
107138319 CDS
T09644
Symbol
Samhd1
Name
(RefSeq) LOW QUALITY PROTEIN: deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03250
Viral life cycle - HIV-1
mmma04623
Cytosolic DNA-sensing pathway
mmma05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107138319 (Samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
107138319 (Samhd1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
107138319 (Samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107138319 (Samhd1)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107138319 (Samhd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
HD_assoc_2
PDEase_I
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
107138319
NCBI-ProteinID:
XP_048666930
Ensembl:
ENSMMMG00000015933
LinkDB
All DBs
Position
Unknown
AA seq
585 aa
AA seq
DB search
MRRSDPEQLSKRPRCDGSPRTPPNTPSAAADRTPELHPDHQTWGPEQVCAFLARSGFQEP
KLLENFRDNKITGSLLPFLDESLLENLGVSSFRERNKLLHCIQRLSKTQVETTKVINDPV
HGHIEFHPLLIRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVAYLGGCLVRSL
REKQPELQISNRDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPGVKWTHEQGSVQMFE
HLVNSNGLRPIMEQYGLIPEEDICFIKEQIIGPLETPVKDSVWPYKGRPKEKSFLYEIVS
NKRNGIDVDKWDYFARDCHHLGIPNNFDYNRFIMFARVCEEGNEKCICIRDKEAGNLYDM
FHTRNRLHHKAYQHKVSNIIDTMITDALLKADPYIEITGAQGKKYHISTAIDDMEAFTKL
TDNVFLEILYSSDPKLDAAQKVLKNIEYRNLYKYVGETQPGEARKIERKDYEHLPKKVAD
AKPDGIFLEAEMKAEDFIVDVINMDYGMKDKNPIDHVRFYCKSDLSRTVSIDKSQVSQLL
PEKFAEQVIRVYCKKKDEKSLFAARQLFVHWCLINNFSKPKEIII
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcggagatccgatcctgagcagctctcaaagcggcccagatgcgatggcagcccgaga
accccaccaaacactccttccgcagcggcggacaggaccccggaactccacccggaccac
cagacctggggcccggagcaggtgtgcgccttcctagcgcgcagtggcttccaggagccc
aaactgctggaaaacttccgagacaataaaatcacaggttcattgctgccctttcttgat
gaatcacttcttgaaaatcttggagttagttccttcagggagaggaataagctgcttcat
tgtatccaacgattgagtaaaactcaggttgagacaactaaggtgatcaatgatcctgtc
catggccacattgagttccaccctcttcttatccggatcattgacactcctcagtttcag
cgtcttcgatacatcaaacagttgggaggcggttactatgtttttccaggagcttcacat
aatcgatttgagcatagtctaggggtggcgtacttaggaggatgtctggtccgctcactg
cgtgaaaaacagccagagctgcagatcagtaatcgagatgtactctgtgttcagattgct
gggctttgtcatgatctcggtcatgggccattttctcatatgtttgatgggagatttatt
ccacttgctcgcccaggagtgaaatggacgcatgaacagggctcagttcaaatgtttgag
catctagtaaattctaatggactcagacctatcatggaacagtatggtcttatccctgag
gaagatatttgctttatcaaggaacaaattataggaccacttgaaacaccagtaaaagat
tctgtgtggccatataaaggacgtcctaaagagaaaagctttctttatgagatagtgtct
aataaaagaaatggcattgatgtggataaatgggattattttgccagggactgccatcat
cttggaatcccaaataattttgattacaaccgctttattatgtttgcccgtgtctgtgaa
gaaggtaacgagaagtgtatttgtattagagataaggaggctgggaatctatatgatatg
ttccacacacggaatcggttacaccacaaagcctatcaacacaaagttagcaacatcatt
gatacaatgattacagatgctctcctcaaagctgacccctacatagagattacaggtgct
caaggaaaaaaataccacatttctacagcaattgatgacatggaagccttcactaagcta
acagataacgtttttctggagattttatactcttctgatcccaaattggatgcagcacaa
aaggttttaaaaaatattgaataccgtaatctatacaaatatgtgggtgagacccagcca
ggagaagcaaggaagattgaaaggaaagactatgaacaccttccaaaaaaggttgctgat
gctaaacctgatggtatattcctggaggctgaaatgaaggctgaagatttcatagtggat
gttatcaacatggattatgggatgaaagacaagaatccaattgatcatgttcgcttctat
tgtaagagtgacctcagcagaaccgtcagtatagataaaagtcaggtttcacagcttcta
ccagagaaatttgcagagcaggtgattcgggtgtattgtaagaagaaagatgaaaagagt
ttgtttgctgcacgacaacttttcgttcattggtgtttaatcaacaacttcagcaagcca
aaggagatcatcatttga
DBGET
integrated database retrieval system
