Marmota marmota marmota (Alpine marmot): 107139423
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Entry
107139423 CDS
T09644
Symbol
Gtf2h2c
Name
(RefSeq) general transcription factor IIH subunit 2-like protein isoform X2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03022
Basal transcription factors
mmma03420
Nucleotide excision repair
mmma05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107139423 (Gtf2h2c)
09124 Replication and repair
03420 Nucleotide excision repair
107139423 (Gtf2h2c)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
107139423 (Gtf2h2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmma03021
]
107139423 (Gtf2h2c)
03400 DNA repair and recombination proteins [BR:
mmma03400
]
107139423 (Gtf2h2c)
Transcription machinery [BR:
mmma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107139423 (Gtf2h2c)
DNA repair and recombination proteins [BR:
mmma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107139423 (Gtf2h2c)
BRITE hierarchy
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
VWA_3
Motif
Other DBs
NCBI-GeneID:
107139423
NCBI-ProteinID:
XP_015337746
Ensembl:
ENSMMMG00000023193
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDASRTMEDQDLKPNRLTCTLKLLEYFIEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDNNTEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEFKGERFCYGCQGELKDQHVYVC
TVCQNVFCVDCDVFVHDSLHCCPGCIHKIPTPSGI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacctgaaagaactaagcggtgggaaggaggctatgagaggacatgggaa
attcttaaagaagatgaatctggttcacttaaagctacaatagaagacattctcttcaag
gcaaagagaaaaagagtatttgagcaccatggacaagtgcgacttggaatgatgcgccac
ctttatgtggtagtggatgcatcaaggacaatggaagaccaagatttaaagcctaataga
ctgacatgcactttaaagttgttggaatacttcatagaagagtattttgatcaaaatcct
atcagtcagattggaataattgtaactaagagtaaaagagctgaaaaactgactgaactc
tcaggaaacccaaggaaacatataacatctttgaagaaagcggttgatatgacctgtcat
ggagaaccatctctttataattccctaagcatggctatgcaaactctaaaacacatgcct
ggacatacaagtagagaagtcctaatcatttttagcagccttacaacttgtgatccatct
aatatttatgatctaatcaagaccctaaaggcagctaaaattagagtgtctgttattggg
ttatctgcagaggttcgagtttgcacagtacttgctcgtgaaactggtggcacataccat
gttattttagatgaaagccattacaaagaattgctaacacatcatgttagtcctcctcct
gccagctcaagttctgaatgctcactcattcgtatggggtttcctcagcacaccattgct
tctttgtctgatcaagatgcaaaaccctctttcagcatggcgcatttggataacaacact
gagccaggacttacattaggaggctatttttgcccacagtgtcgtgcaaagtactgtgaa
cttcctgttgaatgtaaaatatgtggtcttactttggtttctgctccccatttggcacgg
tcttaccatcatttatttcctttggatgcttttcaagaaattcccctggaagaatttaaa
ggagaaagattttgttatggatgtcagggggagttgaaagaccaacatgtctatgtttgt
actgtgtgccaaaatgttttctgtgtggactgtgatgtttttgttcatgactctctccat
tgttgtcctggctgtattcataagattccaactccttcaggtatttga
DBGET
integrated database retrieval system
