Marmota marmota marmota (Alpine marmot): 107139601
Help
Entry
107139601 CDS
T09644
Symbol
Thoc1
Name
(RefSeq) THO complex subunit 1 isoform X2
KO
K12878
THO complex subunit 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03013
Nucleocytoplasmic transport
mmma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107139601 (Thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
107139601 (Thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107139601 (Thoc1)
03041 Spliceosome [BR:
mmma03041
]
107139601 (Thoc1)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107139601 (Thoc1)
Spliceosome [BR:
mmma03041
]
Complex C
Other components
EJC/TREX
107139601 (Thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107139601 (Thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
107139601
NCBI-ProteinID:
XP_015337985
Ensembl:
ENSMMMG00000010509
UniProt:
A0A8C5ZB97
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARMRFTKSTREALNNKNIKPLLCTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSSTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTTDTKPMRVVRKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGIHATPDNLINALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttgcccgaagcgcggatgcggtttacgaaatct
accagagaggccttgaacaacaaaaatatcaagccattattatgtaccttcagccagtta
cctggcagtgaaaatgaaaaaaaatgtacacttgaccaagctttcagaggtgttctagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctattatttctcttgctatt
gggggagtaactgaaggtatatgtactgcatctacaccttttgtattgctgggagatgtt
ttggattgtcttcctttggatcagtgtgacacaatattcacttttgtggaaaaaaatgtt
gctacatggaaatcaagtacattctattctgctgggaagaattatttattgcggatgtgc
aatgatcttctaagaagattatctaaatctcagaatacagttttctgtggacgaattcaa
ctctttttggccagactttttcctttgtctgagaaatcaggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaataccaatgagcaagaaagcacgctgggtcaa
aagcacactgaggatagagaagaagggatggatgtagaagaaggtgaaatgggagatgat
gaagctccaacaacatgttccattccaatcgattacaacctatatagaaaattctggtca
cttcaggattacttcaggaacccagtgcaatgttatgagaagatttcatggaaaactttt
ctcaagtattctgaagaagttttagctgttttcaagagttataaattagatgatactcag
gcctccaggaaaaagatggaagaattgaaaacaggaggcgaacatgtgtattttgcaaaa
tttttaacaagtgaaaagttgatggatttacaactgagtgacagtaactttcgacgacat
atcctgttgcagtatctcattttattccagtatctcaagggacaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtc
tatcaactactatctgaaaacccccccgatggagaaagattttcaaagatggtagagcat
attttaaacactgaagaaaattggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacaacagataccaagcccatgagagtggtacggaagagaacagccccagag
gacttcctagggaaaggacccaataagaaaattctgatgggaaatgaggagttaacaagg
ctttggaatctctgtcctgataacatggaagcctgtaagtcagagacaagggaatacatg
ccaactttggaggagttctttgaagaagccattgaacaagcagaccctgaaaatatggtt
gaaaatgaatataaagctgtgaataattcaaattatggttggagagccctgagactacta
gcacggagaagccctcactttttccagccaacaaatcagcagtttaaaagtttgccagaa
tatcttgaaaacatggtaataaagctagccaaggaattaccaccaccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagt
cctgatgttcggagagataaacctgtaacaggggaacaaatagaggtatttgccaataag
ctgggtgagcaatggaagattctggctccctacttggaaatgaaagactcagaaattagg
cagattgagtgtgacagtgaagacatgaagatgagagctaagcagctcctggttgcctgg
caagatcaagagggaatacatgcaacacctgataacctgattaatgcattgaacaagtct
ggattaagtgaccttgccgaaagtctaactaatgacaatgagacaaatagttag
DBGET
integrated database retrieval system
