Marmota marmota marmota (Alpine marmot): 107145605
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Entry
107145605 CDS
T09644
Symbol
Scn10a
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmma04040
]
107145605 (Scn10a)
Ion channels [BR:
mmma04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
107145605 (Scn10a)
BRITE hierarchy
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
Na_trans_cytopl
GPHH
CcmD_alt
Motif
Other DBs
NCBI-GeneID:
107145605
NCBI-ProteinID:
XP_015345108
Ensembl:
ENSMMMG00000010349
LinkDB
All DBs
Position
Unknown
AA seq
1956 aa
AA seq
DB search
MEFPVGSLETTNFRRFTPESLAEIEKRIAAHQAEKKVKDKPREKKDQEEKPRPQLDLKAC
NQLPKFYGELPAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWIFSPFNLIR
RTAIKMSVHSYPLWFTVFITVTIVVNCVCMTRTDLPEKIEYIFTVIYTFEALIKILARGF
CLNEFTYLRDPWNWLDFSVITLAYVGTAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVRKLADVTILTVFCLSVFALVGLQLFKGNLKNKCVRNDTAPDDASNYSSHRTHVS
YVIKPGTSDPLLCGNGSDAGHCPVGSICLKTSENPDFNYTSFDSFAWAFLSLFRLMTQDS
WERLYQQTLRASGKIYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIAEIEAKEKK
FQEALEMLRKEQEVLTALGIDTASLHSHNGSPLASKNSSERKHRMKSRVSDCSTDDNRSP
QSETYNQRRMSFLGLAPGRRRASHGSVFHFRAPGQDVSFHDGITDDGVFHGDHESRRGSL
LLSKVVGPPGPLPQTPSVGSGHGEEGHPMLTTSELVPGATEVPAFDAGQKKTLLSAEYLN
EPFRVQRAMSVVSIMTSVIEELEDSQQRCPPCLTTLAQKYLIWKCCPTWVKLKTVLYGLV
TDPFAELAITFCIVVNTVFMAMEHHGMSSAFETMLHVGNIVFTIFFTAEMVFKIIAFDPY
YYFQKRWNIFDCVIVTVSLLELSVAKKGSLSVLRTFRLLRVFKLAKSWPTLNTLIKIIGN
SVGALGNLTIILAIIVFIFALVGKQLLGEDYRDHRSVIAVPGDEWPRWHMHDFFHSFLIV
FRILCGEWIENMWACMEVSQKSICLILFLTVMVLGNLVVLNLFIALLLNSFSADNLTAPE
DDGEVNNLQVALARIQAFGRRTKQALRGFFSRPCLPRWPKTEPPLWMKPSISISKAENHI
VADATPMRSPGGLPVLRDPREDHSDFITNPNVWVSVPIAEGESDLDDLEDDGEQDAQSSC
QEVLPKVQQEQLQQVGRYEDHLAPRSPGSGISSEDLTPYVGEQWKDTAAPQVPAEEVDDT
SSSEGSTVDCPDPEEMLKKIPELADDLEEPEDCFTEGCMRHCPCCKVDATKFPWDMGWQL
RKTCYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPKVKALLEYSDRVFTFIFVFEM
LLKWVAYGFKKYFTNAWCWLDFLIVNISLTSLIAKILEYSDMESIKALRTLRALRPLRAL
SRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFWRCINNTNKDFSLV
HWSIVNNISDCQNQNNSDNFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAVDSRE
VDIQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFMTEEQKK
YYNAMKKLGSKKPQKPIPRPLNRYQGFIFDVVTRQAFDIAIMVLICLNMITMMVETDEQS
EEKTKILGKINQFFVAVFTGECVLKMFALRQYYFTNGWNVFDFIVVILSIGSLVFSAILT
SLENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVMFIY
SIFGMSSFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTEPPYCDPN
LPNGNGTRGDCGNPAVGIVFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLSEDDF
DMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNQKILIQMDMPLVPGDKIHCL
DILFAFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWKQEDISATVIQKA
YRSYVLYRSLTLSNPSGVPRTEEEALSHPDEGFVEFMANENCVLPDKSETASATSFPPSY
DSVTRGLSDRVNLSTSSSMQNEDEATSKEMTAPDPE
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atggaattccccgtggggtccctggaaacgaccaacttccgtcggttcactccagagtca
ctggcggagattgagaagcgaattgctgcccatcaggcagaaaagaaagtcaaagataag
cctagagagaagaaggaccaagaagagaagccacggccccagctggacttgaaagcctgc
aaccagctgcccaagttctatggtgagctcccagcagaactggtcggggagcccctggag
gatctagaccccttctacagcacacaccggacatttatggtgctgaacaaaggcaggacc
atttcccgatttagtgccactcgagccctttggatattcagccccttcaacctgatcaga
agaacggccatcaaaatgtctgtccactcatatcctttgtggttcactgtatttattact
gttaccattgtggtcaattgtgtgtgcatgacccgaaccgatcttccagagaaaatcgag
tacatcttcacggtcatttacacctttgaagctttgatcaagattctggcaaggggattt
tgtctaaatgagttcacttacctgcgagatccttggaactggctggactttagcgtcatc
accctggcatatgttggtacagcaatagatctccgaggaatctctggcctgaggacgttc
cgagttcttagagctttaaaaacagtttccgtgattccagggctgaaggtcattgtagga
gccctgatccactcggtgaggaaactggctgatgtgaccatcctcaccgtcttctgcctg
agtgttttcgccctggtgggcctgcagctcttcaagggcaacctcaagaacaagtgtgtc
aggaatgacacagctccagatgatgcctctaattactcatctcacagaacacatgtatct
tatgttattaagccaggcacctctgatcctttactgtgtggcaatggatctgatgcaggc
cactgccctgttggttccatctgccttaaaacttctgaaaacccagattttaactatacc
agctttgattcctttgcttgggctttcctctcactgttccgcctcatgacacaggattcc
tgggaacgcctctaccagcagactctcagagcttctgggaaaatttatatggtctttttt
gtgctggtcatcttcctgggatctttctacctagtcaacttgatcctggctgtggtcacc
atggcgtacgaggaacagaaccaagcaacaattgctgaaatcgaagcaaaggagaagaag
ttccaggaagccctggagatgctccggaaggagcaggaggtgctgacagcactggggatt
gacacagcctctctccattcccacaatggatcacctttagcctccaaaaattccagtgag
agaaagcacagaatgaaatcaagagtgtcggactgctccacagatgacaacagatcaccc
caatctgagacttacaaccaacgcaggatgtctttcctaggccttgctcctggaaggcgt
cgggctagccatggcagtgtgtttcatttccgagcccctggccaagatgtctcattccac
gatgggatcacagatgatggagtctttcatggagaccatgagagccgacggggttccctg
ctcctgagcaaggttgttggaccgccaggcccactgcctcaaactcccagcgttggctct
gggcatggagaagagggacacccaatgctgaccactagtgagcttgttcctggagccaca
gaagttccggcattcgatgcaggacagaagaaaactttattgtcagcagaatacttgaat
gaacctttcagagtccaaagagcaatgagtgtggtcagtatcatgacctctgtcatcgag
gaactcgaggactctcaacagcggtgcccaccctgcttgaccactttggctcagaagtat
ctgatctggaagtgctgcccgacatgggtgaagctcaagacagtgctctatgggctggtg
acagacccctttgcagaactcgccatcactttctgcatcgtggtgaacacagtcttcatg
gccatggagcatcacggcatgagctctgccttcgaaaccatgctccacgtaggcaacatt
gtctttaccatattttttactgctgaaatggtcttcaaaatcattgccttcgacccctac
tattacttccagaagaggtggaatatcttcgactgtgtcatcgtcaccgtgagcctgctg
gagctgagcgtggccaaaaagggaagcttgtctgtgctgcggaccttccgcttgctgcgg
gtcttcaagttggccaagtcctggcccaccttgaacacactcatcaagatcatcgggaac
tcggtgggggcgctggggaacctgaccatcatcctcgccatcattgtcttcatcttcgct
ctggttggcaagcagctgctcggggaagactacagggatcaccgttctgttatcgctgta
ccaggggacgagtggcctcgctggcacatgcatgacttcttccattccttcctcattgtc
ttccggatcctctgtggagagtggatcgagaacatgtgggcctgcatggaagtcagccag
aaatccatatgcctcatcctcttcttgacagtcatggtgctgggaaacctggtggtgctc
aacctgttcatcgccctgctgctgaactctttcagtgccgacaacctcactgcaccagag
gatgacggggaagtgaacaacctgcaggtggccctggcacggatccaggcttttggccgt
cgcaccaagcaggcacttcgaggcttcttcagcaggccctgcctgccccgctggcccaag
acagagcccccgctgtggatgaaaccctccatctctatctccaaagccgagaaccacatt
gttgccgatgctactcctatgaggagccctggagggctgccagttctcagagaccccagg
gaggaccacagtgacttcatcaccaatcctaacgtgtgggtctctgtacccattgctgag
ggtgaatctgacctcgatgacttggaggatgatggtgagcaggatgctcagagctcctgc
caggaagtgctccccaaagtacagcaggagcagctgcagcaagtcgggaggtatgaggac
cacctggcacctaggagcccaggctctggtatctcctctgaggacctaactccatatgtg
ggtgagcagtggaaagacacagctgctcctcaggttcctgcagaggaagtggacgataca
agctcctcagagggcagcaccgtggactgcccagaccccgaggagatgctgaagaagatc
cctgagctggcagatgacctggaagaaccagaggactgcttcacagaaggctgcatgcga
cactgtccctgctgcaaagtggatgccaccaagttcccgtgggacatgggctggcagctg
cgtaagacctgctaccgcatcgtggagcacagctggtttgagagcttcatcatcttcatg
atcctgcttagcagtgggtctctggcctttgaagattattacctggaccagaagcccaag
gtgaaagctttgctggaatactctgacagggtgttcacctttatctttgtgtttgagatg
ctgctcaagtgggtggcctatggcttcaagaagtacttcaccaacgcctggtgctggctg
gacttcctcattgtgaatatctcactgacgagcctcatagcgaagatcctggaatattct
gatatggaatccatcaaagcccttcggaccctccgcgccctgcgaccactgcgggctctg
tcacgtttcgaaggcatgcgggtggtggtagatgccttggtgggcgccatcccatccatt
atgaatgtcctccttgtctgcctcatcttctggctcatcttcagcatcatgggcgtgaac
ctcttcgcagggaagttttggaggtgcatcaacaataccaacaaggacttttctcttgtg
cattggtcaattgtgaataacatttctgattgtcagaatcaaaacaacagtgacaacttt
ttctgggtcaacgtgaaagtcaactttgacaatgttgcaatgggttacctcgcacttctt
caggtggcaacctttaaaggctggatggacatcatgtatgcggctgttgattcccgagag
gtcgacattcagcccaagtgggaggacaacgtgtacatgtacttgtacttcgtcatcttc
atcatttttggtggcttcttcacactgaatctctttgttggggtcataattgacaacttc
aatcaacagaaaaaaaagttagggggccaagacatcttcatgacagaggaacagaagaaa
tactacaatgccatgaagaagttgggctccaaaaagccccagaagcccatcccacggccc
ctgaacaggtaccagggattcatctttgatgtcgtgaccaggcaagcttttgacattgcc
attatggtcctcatttgcctcaacatgatcaccatgatggtggagacagatgagcagagc
gaagaaaagacaaaaatcctcggcaaaatcaatcagttcttcgtggctgtcttcacgggc
gagtgcgtcttgaagatgttcgccttgaggcaatactatttcaccaacggctggaatgtg
tttgacttcattgtcgtgatcctctccatcgggagtctagtgttttctgcgattcttaca
tcactagaaaattacttctctccaacacttttccgagtcatccgcctggcccgaatcggc
cgcatcctcagactgatccgagcagccaaggggatccgcacgctgctctttgccctcatg
atgtccctgcctgccctcttcaacatcggactgctgctcttcctcgtcatgttcatctac
tccatcttcggcatgtccagcttcgcttacgtcaagtgggaggccgggatcgatgacatg
ttcaacttccagaccttcgccaacagcatgctgtgcctcttccagatcaccacgtcagcc
ggctgggatggcctcctcagccccatcctcaacacagagcccccctactgcgaccccaat
ctgcccaatggcaatggcactagaggagactgtgggaacccagccgtgggcatcgtcttc
ttcaccacctacatcatcatctctttcctcatcgtggtcaacatgtacattgcagtgatt
ctggagaacttcaatgtagccacagaggagagcacagagcccctgagtgaggacgatttc
gacatgttctatgagacctgggagaaattcgacccagaagccacccagttcattaccttt
tctgccctctcagactttgcagacactctctcaggccccttgagaatcccaaaacccaat
cagaaaatattaatccagatggacatgcccttggtccctggagataagatccactgtttg
gacatcctctttgccttcaccaagaacgtgctgggagaatctggagagttggattcacta
aaggcaaacatggaggagaagtttatggcaactaatctttcaaaagcatcctatgaacca
atagcaaccaccctccggtggaagcaagaagacatttcagccactgtcattcaaaaggcc
tatcggagttatgtgctatatcgctccttgacactctccaacccctctggagtgcccagg
actgaggaggaggctttgtcacacccagatgaaggctttgtggaatttatggcaaatgag
aattgtgtccttccagacaaatctgaaactgcctctgccacatctttcccgccatcctat
gacagcgtcactagaggcctcagtgatagagtcaacctgagcacatccagctcaatgcaa
aatgaagatgaagccaccagtaaggagatgactgcacctgaccctgagtga
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integrated database retrieval system
