Marmota marmota marmota (Alpine marmot): 107149457
Help
Entry
107149457 CDS
T09644
Symbol
Usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmma01002
]
107149457 (Usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mmma04121
]
107149457 (Usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmma04147
]
107149457 (Usp13)
Enzymes [BR:
mmma01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107149457 (Usp13)
Peptidases and inhibitors [BR:
mmma01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107149457 (Usp13)
Ubiquitin system [BR:
mmma04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107149457 (Usp13)
Exosome [BR:
mmma04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107149457 (Usp13)
BRITE hierarchy
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
UBA_3
HYPK_UBA
Motif
Other DBs
NCBI-GeneID:
107149457
NCBI-ProteinID:
XP_015349720
Ensembl:
ENSMMMG00000004025
UniProt:
A0A8C5YWI0
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MQRRGALFSMPGGSGSRKMAAGDIGELLVPHMPTIRVPRSGDRVYKNECVFSYDSPNSEG
GLYVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHVREKVRGASGGALPKRRNSKIFLDL
DTDDDLNIDDYEYEDEAKLVIFPDHYEIALPNIEELPALVTIACDAVLSSKSPYRKQDPD
TWENELPVSKYANNLTQLDNGVRIPPSGWKCARCDLRENLWLNLTDGSVLCGKWFFDSSG
GNGHALEHYRDMGYPLAVKLGTITPDGADVYSFQEEEPVLDPHLAKHLAHFGIDMLHMHG
TENGLRDNDIKPRVSEWEVIQESGTKLKPMYGPGYTGLKNLGNSCYLSSVMQAIFSIPEF
QRAYVGNLPRIFDYSPLDPTQDFNTQMTKLGHGLLSGQYSKPPVKSELIEQVMKEEHKPQ
QNGISPRMFKAFVSKSHPEFSSNRQQDAQEFFLHLVNLVERNRIGSENPSDVFRFLVEER
IQCCQTRKVRYTERVDYLMQLPVAMEAATNKDELIAYELTRREAEANRRPLPELVRAKIP
FSACLQAFSEPENVDDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFD
VSIDMPDLLDISHLRARGLQPGEEELPDISPPIVIPDDSKDRLMNQLIDPSDIDESSVMQ
LAEMGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFAEPLTIPGYGGAASAGASVFG
ATGLDNQPPEEIVAIITSMGFQRNQAVQALRATNNNLERALDWIFSHPEFEEDSDFVIEM
ENNANANIISEAKPEGPRVKDGSGMYELFAFISHMGTSTMSGHYVCHIKKEGRWVIYNDH
KVCASERPPKDLGYLYFYRRIPS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccggggcgccctgttcagcatgccgggcggcagcgggagcaggaagatggct
gcaggagacatcggcgagcttctggtgccccacatgcccaccatccgcgtgcccaggtcc
ggggacagggtctacaagaacgagtgcgtcttctcctacgactcccctaactctgaaggt
ggactctatgtatgcatgaatacattcttggcctttggaagggaacatgttgaaagacat
tttcgaaaaactggacagagtgtgtacatgcacctgaaaagacatgtgcgagagaaggta
agaggggcatctggtggagctttgccaaaaaggaggaattccaagatttttttagatcta
gatactgatgacgatttaaatatcgacgattatgaatatgaagatgaagccaaacttgtt
atattcccagaccactatgaaatagcactaccaaatattgaggagttaccagccctggtg
acaattgcctgtgatgcagttctcagctcaaaatctccatacagaaagcaggacccagac
acatgggaaaatgagttgccagtatctaaatacgccaataacctcacccagttggacaat
ggtgtcaggattcctccaagtggttggaagtgtgccagatgtgacctgcgggagaacctc
tggttgaatttgactgacggctctgtcctgtgtgggaagtggttcttcgacagctctggg
ggtaatgggcatgcactggagcactatagagacatgggctaccctctagccgtgaagctg
ggaaccatcactcccgatggggcagatgtttattcttttcaagaagaggaacctgttttg
gatcctcatttggccaaacacctagcacattttggaattgatatgcttcacatgcatggg
acagagaatgggcttcgggacaatgacatcaagcccagggtcagcgagtgggaagtgatc
caggagtcggggacgaagctgaagcccatgtatggccccgggtacacaggtctgaagaac
ctggggaacagctgctacctcagttcagtcatgcaggccatcttcagcatcccagaattc
cagagagcgtatgtaggaaaccttccaagaatatttgactactcgcctttagatccaaca
caagatttcaacacacagatgactaagttaggacatggccttctttcgggtcagtattca
aagcctccagtgaaatcggagctcattgagcaggtcatgaaagaggagcacaagcctcaa
cagaatgggatctctccacgcatgtttaaggcctttgtcagcaagagccacccagagttc
tcctccaacaggcagcaggatgcccaggaatttttcttgcacttggtgaatcttgtagag
aggaaccgcatcggctcagaaaacccgagtgatgtttttcggtttttggtggaagagcgt
attcagtgctgtcagacccggaaagtccgctacacggagagggtggattacctgatgcag
ttgcccgtggccatggaggcagcaaccaacaaggatgaactgattgcctatgaactaacg
agaagggaagcagaagccaacagaagaccccttcccgagctggtgcgagccaagataccc
ttcagtgcctgccttcaggctttttctgaaccagaaaatgttgatgatttctggagcagc
gccctacaagcaaagtctgccggtgtgaaaacgtcccgctttgcctcattcccagaatac
ttggtcgtgcagataaagaagttcacttttggtcttgactgggttcccaaaaaatttgac
gtttctattgacatgccagacctacttgacatcagccacctccgagccagggggttacag
ccaggagaggaggaacttccagacatcagtccccccatagtcattcctgatgactcaaaa
gatcggctgatgaaccaattgatagacccctccgacatcgatgagtcgtcagtgatgcag
ctggccgagatgggcttccctctggaagcgtgtcggaaggctgtgtacttcacgggaaac
atgggagccgaggtggccttcaactggatcattgttcacatggaagagccagattttgct
gaaccgctgaccatccctggttatggaggagcagcatctgctggagcctctgtatttggt
gctactggattggacaatcaacctccagaggagattgtagctatcatcacctctatggga
ttccagcgaaatcaggctgtgcaggcgctacgagcaacgaataataacctggaaagagca
ctggactggatctttagccaccctgagttcgaagaagacagtgactttgtgattgagatg
gagaataatgccaatgcaaacattatttctgaggccaaacctgaaggacctagagtcaag
gatggatctggaatgtacgaattatttgcattcatcagtcacatgggaacatctacaatg
agtggccattatgtttgccatataaagaaggaaggaagatgggtgatctacaatgaccac
aaagtttgtgcctcagaaaggcccccaaaagacctgggctacctgtacttttaccgcagg
ataccaagctaa
DBGET
integrated database retrieval system
