Mycolicibacterium monacense: EWR22_23520
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Entry
EWR22_23520 CDS
T08739
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mmon
Mycolicibacterium monacense
Pathway
mmon03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mmon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
EWR22_23520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmon03400
]
EWR22_23520
Enzymes [BR:
mmon01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
EWR22_23520
DNA repair and recombination proteins [BR:
mmon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
EWR22_23520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
QHP88078
LinkDB
All DBs
Position
complement(4920157..4922433)
Genome browser
AA seq
758 aa
AA seq
DB search
MVDHFGRVRLTNPDKVLYPATGTTKAEVFEYYVDVAEAMVPHIAGRAVTRKRWPNGVGEL
EFFEKQLASSAPDWLQRGTIVHKSGTTTYPIIDTREGLAWIAQQAALEVHVPQWRFVGSG
GDLTPGPATRIVFDLDPGEGVTFRQLCEVAHEVRDLITGIGLTAYPLTSGSKGLHLYVPL
QEPISSQGASVLAKRVAQQLEAAMPKQVTATMTKSLREGKVFLDWSQNNGNKTTIAPYSL
RGREHPTVAAPRTWEEIEDPDLRHLRFDEVLERIEEFGDLLADLDEYVPVEDRLTKYRSM
RDPSRTPEPVPPLPPKAGNNDRFVIQEHHARRLHYDLRLERDGVLVSWAVPKNLPDRPSE
NHLAVHTEDHPMEYLTFHGTIPKGEYGGGDMIVWDTGTYETEKFNDHAPDGPAKGGEVII
TLHGNRIDGRYALIQTDGKNWLAHRMKDQGNPTFEDFAPMLATHGSVEKLTAKQWAFEGK
WDGYRLLVDADHGKLCLKSRSGRDVTAEYPQLRALAADLADHHVVLDGEVVALDDKGVPS
FGHMQNRARSTRVEFWAFDILRLDGRWLLKAKYRDRRKLLETLASGGGLIVQPLLDGDGL
EALEDARKRRWEGVVAKKWDSTYQPGRRSSAWIKDKLWNTQEVVIGGWREGNGGRSSGIG
ALVLGIPGPDGLQFVGRVGTGFTEKELGSLKKTLAPLHTYESPFATRLPTQDAKGVTFVR
PELVGEVRYSERTGDGRLRQPSWRGLRPDKTPDDVVWE
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
gtggtggatcacttcggtcgggtgcgcctgaccaacccggacaaggtgctgtacccggcg
acgggcaccaccaaggccgaggtgttcgagtactacgtcgacgtggccgaggcgatggtg
ccgcacatcgccggccgggcggtcacccgtaagcgctggcccaacggcgtcggcgagttg
gagttcttcgagaagcagctggccagctccgcacctgactggctccagcgcggcacgatc
gtgcacaaatcgggcaccaccacctacccgatcatcgacacccgcgaaggtctggcgtgg
atcgcgcagcaggccgcgctggaggtgcacgtgccgcagtggcggttcgtcggatcgggt
ggcgacctgactcccggcccggccacccggatcgtgttcgacctcgaccccggcgagggc
gtcacgttccgtcagctgtgcgaggtcgcgcacgaggtccgcgacctgatcaccggcatc
gggctgacggcctatccgctgaccagcggcagcaagggtctgcacctctacgtcccgctc
caggagccgatcagctcccagggcgcgtcggtgctcgccaaacgcgtcgcccaacagctc
gaagcggccatgcccaaacaggtcaccgccacgatgaccaagagcctgcgcgagggcaag
gtgttcctcgactggagccagaacaacggcaacaagaccacgatcgcgccgtactccctg
cgcggccgcgagcatccgacggttgcggcgccacgcacctgggaggagatcgaggacccc
gacctgagacatctgcgattcgacgaagtgctcgagcggatcgaggagttcggggacctg
ctggccgatctcgacgagtacgtgcctgtcgaggaccggctcaccaagtaccgcagcatg
cgcgacccgtcgaggacgccggagcccgtgccgccgctaccgccgaaggccggcaacaac
gaccgcttcgtgatccaggaacaccatgcccggcggctgcactacgacctgcgtctggaa
cgcgacggtgtgctggtcagctgggcggtgccgaagaacctgcccgaccggccctcggag
aaccacctcgccgtgcacaccgaggaccatccgatggagtacctcaccttccacggcacc
atcccgaagggtgagtacggcggcggcgacatgatcgtctgggacaccggcacgtatgag
accgagaagttcaacgaccacgccccggacggacccgccaagggcggggaggtcatcatc
accctgcacggcaacaggatcgacggccgttacgcgttgatccagaccgacggcaagaac
tggctcgcccaccggatgaaggatcagggcaacccgacgttcgaggacttcgccccgatg
ctggccacccacggctcggtcgagaagctcacggcgaaacagtgggcgttcgaaggcaag
tgggacggctaccggctgctggtcgacgccgaccatggcaagctgtgtctgaagtcccgt
agcggccgcgacgtcaccgcagagtatccccaattacgcgcgctggcagcagatctcgcc
gaccaccatgtcgtgctcgacggggaggtcgtcgccctcgatgacaagggcgtgccgagc
ttcggtcatatgcagaaccgggcccggtccacccgtgtcgagttctgggcgttcgacatc
ctgcgcctcgacggccgttggctgctgaaggcgaagtaccgagaccgccgaaagctgttg
gagacgttggccagtgggggcggactgatcgtgcaacccctactcgacggcgacggcctc
gaggctctcgaggacgcccgcaaacgcaggtgggagggtgtggtcgccaagaaatgggat
tccacctatcagccggggcggcgctcgtcggcgtggatcaaggacaaactgtggaacacc
caggaggtcgtgatcggcgggtggcgcgaaggcaacggcggccgcagcagcggcatcggc
gcactggtgctcggcatccccggacccgacggcctgcagttcgtcggccgagtcggcacc
gggttcaccgagaaggaactcggcagtctcaagaagacgttggcgccgctgcacacctac
gaatcccccttcgcgacaaggcttcccacccaggacgccaagggcgtgacgttcgtgcgg
cccgaactcgtcggcgaggtgcgttacagcgagcgtaccggcgacggccggttgcgccaa
ccgtcctggcgggggctgcgaccggacaagacgccggacgacgtcgtgtgggagtag
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