Methanococcus maripaludis C5: MmarC5_1725
Help
Entry
MmarC5_1725 CDS
T00491
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mmq
Methanococcus maripaludis C5
Pathway
mmq03410
Base excision repair
mmq03430
Mismatch repair
mmq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MmarC5_1725
03430 Mismatch repair
MmarC5_1725
03440 Homologous recombination
MmarC5_1725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmq03400
]
MmarC5_1725
DNA repair and recombination proteins [BR:
mmq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MmarC5_1725
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MmarC5_1725
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MmarC5_1725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
DHH_CID
DUF6327
Motif
Other DBs
NCBI-ProteinID:
ABO36022
UniProt:
A4G0N8
LinkDB
All DBs
Position
1674376..1675779
Genome browser
AA seq
467 aa
AA seq
DB search
MEYLINLKKAVKLLRKNRDKKILVCTHIDTDGINSRIILEKVLERLNIGAEFLFLRQIDY
GTVDTIPFDNDLIIFADLGSGQIDLINEKLKEISKKPKIIILDHHLISNEKIPENIVNVN
PHNNGIDGGKEICGAGVCYLFAKICDPRFTDLAKYAVLGAVGDVQSLEGNLIGLNRDVIL
KDAIKSGDISVSPDLQFYGKHTRPLFTSIKYFTDVRTDLTDNDSRIINFINNVNRKHGTD
IIPKNYLCELTFEEKKIMGTEFLHKCSRYIPPAWRIHLPKVIFGESYELTNEEFKSNLKN
LEEFSTCINGCSRYDEYEVPLEVLKGDRDKNYSKMLRMLKKHKRNLAGSMDFLRNEVEIV
QKENFQYFKVDKNAIKGNIVGIVAGMSYSLEKVDWKKPIFAVSEVDGGYKVSARCPKLLS
FAQDINLATAINYASKKVGGSGGGHKFACGAYIPEIGDFVKYLEEKL
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggaatatttaattaatttaaaaaaagcagttaaattacttagaaaaaatcgggataaa
aaaatactagtctgtactcacatcgatacagacggtataaattccagaattattttagaa
aaagtgcttgaaagattgaatattggggcggaatttctatttttaaggcagattgattat
ggaacagttgatacaattccatttgataatgatttaataatatttgcagaccttggaagc
ggtcaaatcgatttaataaatgaaaagttaaaagaaatctccaaaaaaccaaaaataatt
attttagaccaccacctgatttcaaatgaaaaaatccctgaaaatattgtaaatgtaaac
ccccacaacaacggaattgacggcgggaaagaaatttgcggtgctggagtttgctacctt
tttgcaaagatatgtgatccccgatttactgatcttgcaaaatatgcagttttaggggct
gttggggatgttcaaagtcttgaaggaaatttaattggattgaatagggatgtaatttta
aaagatgcaattaaatctggcgatatttcggtaagtcctgatttacagttttacgggaag
catacgaggccgctttttacttcgattaaatatttcaccgacgttagaaccgatcttacc
gataacgactctcgaataattaactttataaacaatgtaaacagaaagcacggaaccgat
ataattccaaaaaattacctgtgtgagctcacatttgaagaaaaaaagatcatgggaact
gagtttttacacaaatgcagtcgatatattcctcctgcatggcgaatacaccttccaaaa
gttatttttggggaaagttatgagttaacaaatgaagaatttaaatcgaatctgaagaat
ctggaagaattttcaacctgtataaatggatgttcgagatacgatgaatatgaagttcct
ctggaagttttaaaaggggatcgggataaaaactacagtaaaatgcttagaatgcttaaa
aaacacaaaagaaatcttgcaggttcgatggattttttaaggaatgaagttgaaatagtt
cagaaggaaaatttccagtactttaaagttgataaaaatgcaataaaaggaaacatcgtt
ggaattgttgcaggaatgagttattctcttgaaaaggttgactggaaaaagccaattttt
gcagtttccgaggtagatgggggatacaaggtttcagcaagatgtccaaagcttttatcc
tttgcacaagatattaatcttgcaactgcgataaactacgcttctaaaaaggttggtgga
agtggcggcggacacaaattcgcctgtggggcttatatcccagaaattggagattttgtt
aaatatctcgaagaaaaattataa
DBGET
integrated database retrieval system
