Janthinobacterium sp. Marseille: mma_2251
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Entry
mma_2251 CDS
T00561
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
mms
Janthinobacterium sp. Marseille
Pathway
mms00521
Streptomycin biosynthesis
mms00523
Polyketide sugar unit biosynthesis
mms00541
O-Antigen nucleotide sugar biosynthesis
mms01100
Metabolic pathways
mms01110
Biosynthesis of secondary metabolites
mms01250
Biosynthesis of nucleotide sugars
Module
mms_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
mms00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
mma_2251 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
mma_2251 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
mma_2251 (rfbC)
Enzymes [BR:
mms01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
mma_2251 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ABR88545
UniProt:
A6T094
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All DBs
Position
complement(2521278..2521829)
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AA seq
183 aa
AA seq
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MKMKLVQTKIPDILLLEPNVLGDDRGFFFESFNERRFAEVTGKTVKFVQDNHSRSLRGVL
RGLHYQIQQPQGKLVRVVSGEVFDVAVDIRKSSPTFGQWAGAVLSAENQRQMWIPEGFAH
GFVVTSDTAEFLYKTTDYWAPEHERCIAWDDPAIGIDWPINGVPILSAKDQQGTRLADAE
VFA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatgaaactggttcaaacaaaaatcccggatatcttattgcttgagccgaatgtc
ctgggcgatgacaggggattttttttcgaaagttttaacgaaagacgttttgctgaagtc
acaggtaaaacagtcaaatttgttcaagacaaccattccaggtcattgcgtggtgtacta
cgcggtttgcattaccagatacagcagccgcagggcaaactggtgcgtgtagtatctggc
gaagtctttgacgtcgcagttgacatccgcaaaagctcccccaccttcggccagtgggca
ggtgcagtcctctccgccgaaaaccaacgccagatgtggatacctgagggatttgcgcac
ggctttgtcgtcaccagcgataccgcggaattcctgtacaagaccacagattactgggct
cccgaacatgaacgctgcatcgcctgggatgatcccgcgatcggtatcgactggcctata
aatggcgtgccaattttgtcggccaaggaccaacagggaacgcgtctggcggatgccgag
gtgtttgcttga
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