Mus musculus (house mouse): 100042165
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Entry
100042165 CDS
T01002
Symbol
Thoc2l, 1110004B06Rik, AI451450, D930016D06Rik, Gm3179
Name
(RefSeq) THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03013
Nucleocytoplasmic transport
mmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100042165 (Thoc2l)
09122 Translation
03013 Nucleocytoplasmic transport
100042165 (Thoc2l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
100042165 (Thoc2l)
03041 Spliceosome [BR:
mmu03041
]
100042165 (Thoc2l)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100042165 (Thoc2l)
Spliceosome [BR:
mmu03041
]
Complex C
Other components
EJC/TREX
100042165 (Thoc2l)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100042165 (Thoc2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
100042165
NCBI-ProteinID:
NP_001160053
MGI:
3040669
Ensembl:
ENSMUSG00000097392
UniProt:
E9Q5E2
LinkDB
All DBs
Position
5:104656172..104702073
Genome browser
AA seq
1589 aa
AA seq
DB search
MAMTSTTVVVPAEWIKTWEKSGRGEFLRLCRILSESKSRDTFAWRDFQQALYELSYHVIK
GTLKPEQASNVLNDISEFREDIPFILADIFCILDIETNCLEEKSKRDHFTQLILACLYLV
SDTVLKERLDPETLGSLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIVE
LGQDLSGNITSDLILEILKSLIGCFNLDPNRVLDIILEVFECRPEHHDFFISLLEAYMSM
CEPHTLCHILGFKFKFYQEPNGETPSSLYRAAAVLLQFNLIDLDDLYVHLLPADSCIVSE
YKREIVEAKQIVKKLTMVVLPSEKSDEREKEKKKDDKVEKAPDNQKLGLLEALLIIGDWK
HAQSIMDHMPPYYATSHKVIALAICNLIHITIEPIYRRVGVPKGAKGSPVNALQNKKAPK
QAESFEDLRRDVFSMFYYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGKQENKEKMEAIL
SCLLSVTDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAYTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTALNYDVLAYCIIEALANPEKERMKHDDTTISNWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEVTEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTDDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYIMSCEMVMAPVHEAVVSLHISKVWDDISPQFYTTFWSLTMYDLAVPHTSYE
REVNKLKIQMKAVDDSQEMPLNKKKKEKERCTALQDKLLEEEKKQTEHVQRVLHRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDSVYCAHFVELVHQQKTPNFSTLLCYDRV
FSDIIYMVASFTENEASRYGRFLCCMLETVTRWHSDRSTYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKICQEEKEKKPDLYALAMVYSGQLKSRKSYMIPENEFHHKDPPPRNTATNL
QPSGPCSGLPSSIGSMCKLDESSAEEADKSRERAQCAVKAANKASSVTPKGNLSNGNSGS
NSKAVKENDKEKGKEKEKEKKEKTPAVTPEARVLGKDSKEKPKEEQPNKDEKIREAKERM
PKSDKDKEKLKKEEKAKDEKFRIIVANVESKSTQEREKEKEPSKERDLAKEMKSKENVKG
GEKAPVSGSLKSPISRTDITEPEREKRRKVDSHPSPSHSSTIKDSLVKLKESSAKLYINH
IPPLLCKSKEREADKKDLDKSRERSREREKKEEKDRKERKRDYSNNDREAPLDLIKRRKD
ENGILGVSKHKSESPCESLYPNEKDKEKMKSKSSGKEKGDSFKPEKIDKISSGKKESGHD
KEKIEKKEKWDGSGDKEEKKHHKTSDKHR
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgacctcgacaactgtagtggttcctgcagagtggatcaagacctgggaaaaa
tctgggagaggcgagtttttgcgtttgtgccggattctcagtgaaagtaaaagccgagac
acttttgcttggagagatttccaacaagcactctatgagttgtcataccatgtcattaaa
ggaactttaaagcccgaacaggcctcaaatgttcttaatgacatcagtgaatttcgagaa
gatattccatttattcttgctgatatattctgcatattagatattgagacgaattgtcta
gaagaaaaaagcaaaagagatcattttacacaactgatattagcatgtttatatttagtc
tcagacacagttctaaaggaacgcttggatccagaaacattggggtcattgggccttatc
aaacaatcgcagcagttcaatcaaaaatcagttaagatcaaaacgaaactcttctataaa
cagcagaaattcaatttgctaagagaagaaaatgaaggttatgccaagctgattgttgaa
ttagggcaagatttatctggaaatatcactagtgatttaatcttagaaattctcaaatct
ttaatagggtgctttaatctagatcccaatagagttttggatatcattttagaagtgttt
gaatgcaggccagaacaccatgatttctttatatctttattagaagcttatatgagtatg
tgtgaaccacacacactgtgtcatattcttgggttcaaattcaagttttaccaggagcca
aatggtgagaccccatcttccttgtatagagctgcagcagtgctcctgcagtttaacctt
atcgatttggatgatctctatgtgcaccttcttccagctgatagctgcattgtgagtgaa
tacaaacgggaaattgtggaagctaagcaaattgttaaaaaacttacaatggttgtattg
ccttccgaaaaaagtgatgaacgagaaaaagaaaagaaaaaagatgataaggtagagaag
gcacctgacaaccaaaaacttggtttgttggaagccttgttaattattggtgattggaaa
catgcacaaagtattatggaccatatgcctccatactatgcaacatcacataaagtaata
gcccttgctatttgcaatcttatacacataactattgagcctatttaccgaagagttggt
gtccctaaaggtgccaaaggctcacctgtcaatgctttacaaaacaagaaggcaccaaag
caagcagagagctttgaagacttaaggagagatgtattcagtatgttctattaccttggt
cctcacctttctcatgatcccatcttatttgcaaaggttgtgcgcataggcaagtcattt
atgaaggaatttcagtctgatgggaaacaagaaaataaagagaaaatggaagctattctt
agttgtttgcttagcgttactgaccaggtactgcttccttctctttctttaatggattgc
aatgcgtgcatgtctgaggaactatggggaatgtttaaaacatttccttatcaacataga
tatcgcttatatggacagtggaagaatgagacttacaacagccatccacttttagtgaaa
gttaaagcttatacaatagatcgagccaaatacatcatgaagcgcctaacaaaggaaaat
gtgaagccttcaggaagacagattgggaaattgagccacagtaatccaaccattttgttt
gattatatcttgtcacaaatacagaagtatgataacttaataacccctgtggtagactca
ttgaaatacctcactgcgttgaattacgatgttttagcctattgtatcattgaagcacta
gctaatccagaaaaagaaaggatgaaacatgatgacacaaccatctccaactggcttcag
agtctggctagtttctgtggtgcagtttttcgtaaatacccaattgatcttgctggtctt
cttcagtatgtagccaatcagttaaaggcaggcaaaagttttgatctacttatattgaaa
gaagtagtacaaaaaatggcaggaatagaagttacagaggaaatgacaatggagcagctt
gaggctatgacaggtggggaacaactgaaagctgaaggtggatattttggccagattaga
aacactaaaaaatcctctcagagattaaaggatgcactactggaccatgatcttgccctt
cctctttgtttgctcatggcacagcaaaggaatggggtgatatttcaggaaggcggagag
aaacatttgaaacttgtgggaaagctatatgaccagtgtcatgataccttggtacagttt
ggtgggtttttagcatcaaatctaagcacagatgattacataaagagagttccttcaatt
gatgtgctttgtaatgaatttcatacaccccatgatgcagcattttttctgtctcggcca
atgtatgcacaccatatttcatcaaagtatgatgaacttaagaaatcagaaaagggtagt
aagcagcaacataaagttcataagtacattatgtcatgtgagatggtgatggctcctgtc
catgaagcagtggtctcgttacatatctccaaagtctgggacgatatcagccctcagttc
tataccacattctggtctctgaccatgtatgaccttgcagtgccacataccagctatgaa
cgggaagtcaataaactgaagatccaaatgaaagcagttgatgacagtcaagaaatgcct
ctaaataaaaagaaaaaggagaaagagcgctgcactgccttgcaggacaagcttcttgaa
gaggagaagaaacagacggagcatgtacagcgagttctacacaggctgaaattagaaaag
gacaactggctcttagcaaaatctactaaaaatgagaccatcacaaaatttctccagttg
tgtatatttcctcgatgtattttttcagcaattgattctgtttactgtgctcattttgtt
gagttagtccatcaacagaagactccaaatttttccacacttctttgctatgaccgagtt
ttttcagacataatttacatggttgctagctttactgaaaatgaagctagtcgatatggg
agatttctttgctgcatgttagagactgtgactaggtggcacagcgacagatctacctat
gagaaggaatgtggaaactatccaggattccttactatattacgagcaactggatttgat
ggtggaaataaagctgatcagctagattatgagaattttcgacatgttgtacataaatgg
cattacaaactaaccaaggcatcggtacattgcctcgaaacaggtgaatatacacatatc
aggaatatcttgattgtactaacaaaaatactaccatggtaccccaaggttttaaatctg
ggtcaggctttggaaagaagagtgcataaaatctgccaagaagaaaaagaaaagaaacca
gatctatatgcattagcaatggtctactctgggcagctgaaaagtagaaagtcatacatg
atacctgaaaatgaatttcatcacaaagaccctcctccaagaaatactgctaccaatcta
caaccaagtgggccttgtagtgggctgccttcatctataggaagtatgtgtaaattagat
gagagcagtgctgaggaggccgacaaatcacgagaaagagctcagtgtgctgtgaaagct
gctaataaagcttccagtgtcacaccaaaagggaatttaagcaatggaaacagtggctct
aacagcaaagctgttaaggaaaatgacaaagaaaagggcaaagagaaagagaaagaaaaa
aaagaaaagaccccagctgttactccagaggccagggtacttggtaaagacagtaaagaa
aaacccaaggaagaacaaccaaataaagatgaaaaaataagagaagccaaagaaagaatg
cctaaatctgataaagacaaggaaaaattaaagaaggaagaaaaagctaaagatgagaaa
ttcaggatcattgttgccaatgtagaatcaaaatccactcaagaaagggaaaaagagaaa
gagccctcaaaagaaagagatttagcaaaggaaatgaagtcaaaagagaatgttaaagga
ggggaaaaagcaccagtttctggctccttgaaatcacctatttcccgaacagatatcaca
gaacctgaaagagaaaaacgtcgcaaagttgattcccatccttctccatcacactcttcc
acaataaaggacagtcttgtcaaacttaaggaatcttcagcaaagctctatatcaaccat
attccaccactactgtgcaagagtaaagagagagaagcagacaagaaagatttggacaag
tcaagggaaagatccagagaaagagagaaaaaagaggaaaaggacaggaaagagcggaaa
agagattattcaaacaatgaccgagaggcacccttggacttaatcaagaggcggaaagat
gaaaatggaatattgggggtttcaaaacacaaaagtgaaagtccctgtgagtctctttat
ccaaatgagaaagacaaggaaaaaatgaagtcaaaatcctcaggcaaagaaaaaggtgat
tcatttaaacctgaaaagatagataaaatatccagtgggaaaaaggagtccggacatgat
aaggaaaagatagagaagaaagagaaatgggatggttctggagataaggaagagaagaaa
catcataaaacctcagacaagcacagataa
DBGET
integrated database retrieval system
