Mus musculus (house mouse): 20271
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Entry
20271 CDS
T01002
Symbol
Scn5a, Nav1.5, Nav1.5c, SkM1, SkM2, mH1
Name
(RefSeq) sodium channel, voltage-gated, type V, alpha
KO
K04838
voltage-gated sodium channel type V alpha
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
20271 (Scn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmu04040
]
20271 (Scn5a)
Ion channels [BR:
mmu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
20271 (Scn5a)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
20271
NCBI-ProteinID:
NP_001240789
MGI:
98251
Ensembl:
ENSMUSG00000032511
UniProt:
Q9JJV9
K3W4N7
Q8C3I3
LinkDB
All DBs
Position
9:complement(119312470..119408096)
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AA seq
2020 aa
AA seq
DB search
MANFLLPRGTSSFRRFTRESLAAIEKRMAEKQARGSATSQESREGLPEEEAPRPQLDLQA
SKKLPDLYGNPPRELIGEPLEDLDPFYSTQKTFIVLNKGKTIFRFSATNALYVLSPFHPV
RRAAVKILVHSLFSMLIMCTILTNCVFMAQHDPPPWTKYVEYTFTAIYTFESLVKILARG
FCLHAFTFLRDPWNWLDFSVIVMAYTTEFVDLGNVSALRTFRVLRALKTISVISGLKTIV
GALIQSVKKLADVMVLTVFCLSVFALIGLQLFMGNLRHKCVRNFTELNGTNGSVEADGIV
WNSLDVYLNDPANYLLKNGTTDVLLCGNSSDAGTCPEGYRCLKAGENPDHGYTSFDSFAW
AFLALFRLMTQDCWERLYQQTLRSAGKIYMIFFMLVIFLGSFYLVNLILAVVAMAYEEQN
QATIAETEEKEKRFQEAMEMLKKEHEALTIRGVDTVSRSSLEMSPLAPVTNHERRSKRRK
RLSSGTEDGGDDRLPKSDSEDGPRALNQLSLTHGLSRTSMRPRSSRGSIFTFRRRDQGSE
ADFADDENSTAGESESHRTSLLVPWPLRRPSTQGQPGFGTSAPGHVLNGKRNSTVDCNGV
VSLLGAGDAEATSPGSHLLRPIVLDRPPDTTTPSEEPGGPQMLTPQAPCADGFEEPGARQ
RALSAVSVLTSALEELEESHRKCPPCWNRFAQHYLIWECCPLWMSIKQKVKFVVMDPFAD
LTITMCIVLNTLFMALEHYNMTAEFEEMLQVGNLVFTGIFTAEMTFKIIALDPYYYFQQG
WNIFDSIIVILSLMELGLSRMGNLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGALG
NLTLVLAIIVFIFAVVGMQLFGKNYSELRHRISDSGLLPRWHMMDFFHAFLIIFRILCGE
WIETMWDCMEVSGQSLCLLVFLLVMVIGNLVVLNLFLALLLSSFSADNLTAPDEDGEMNN
LQLALARIQRGLRFVKRTTWDFCCGLLRRRPKKPAALATHSQLPSCIAAPRSPPPPEVEK
APPARKETRFEEDKRPGQGTPGDTEPVCVPIAVAESDTDDQEEDEENSLGTEEEESSKQQ
ESQVVSGGHEPPQEPRAWSQVSETTSSEAEASTSQADWQQEREAEPRAPGCGETPEDSYS
EGSTADMTNTADLLEQIPDLGEDVKDPEDCFTEGCVRRCPCCMVDTTQAPGKVWWRLRKT
CYRIVEHSWFETFIIFMILLSSGALAFEDIYLEERKTIKVLLEYADKMFTYVFVLEMLLK
WVAYGFKKYFTNAWCWLDFLIVDVSLVSLVANTLGFAEMGPIKSLRTLRALRPLRALSRF
EGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINQTEGDLPLNYTI
VNNKSECESFNVTGELYWTKVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVDSRGYEEQ
PQWEDNLYMYIYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNA
MKKLGSKKPQKPIPRPLNKYQGFIFDIVTKQAFDVTIMFLICLNMVTMMVETDDQSPEKV
NILAKINLLFVAIFTGECIVKMAALRHYYFTNSWNIFDFVVVILSIVGTVLSDIIQKYFF
SPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMA
NFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGPPYCDPNLPNSNG
SRGNCGSPAVGILFFTTYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFDMFYEI
WEKFDPEATQFIEYLALSDFADALSEPLRIAKPNQISLINMDLPMVSGDRIHCMDILFAF
TKRVLGESGEMDALKIQMEEKFMAANPSKISYEPITTTLRRKHEEVSATVIQRAFRRHLL
QRSVKHASFLFRQQAGSSGLSDEDAPEREGLIAYMMNENFSRRSGPLSSSSISSTSFPPS
YDSVTRATSDNLPVRASDYSRSEDLADFPPSPDRDRESIV
NT seq
6063 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttcctgttacctcggggcaccagcagcttccgtaggttcacccgggagtca
ctggcggccatcgagaagcgcatggctgaaaaacaagcccgtggttcggccacctcacag
gagagccgtgagggcctgccagaggaggaggctccccggccccagctggacctacaggcc
tccaaaaagctgccagatctctatggcaacccaccccgagagctcattggggagcccctg
gaagacctggaccctttctatagtacccagaagaccttcatcgtgctgaataagggcaaa
accatcttccggttcagtgccaccaatgccttgtacgtcctcagccccttccacccggtg
cgcagagcggctgtgaagattttggtacattcgctcttcagcatgctcatcatgtgcacc
atcctaaccaactgtgtgttcatggcacaacacgaccctccgccttggaccaaatatgtt
gagtacaccttcaccgccatctacacctttgagtctctggtcaagattctagctcgaggc
ttctgcctgcatgcgttcaccttcctccgggacccgtggaactggctagacttcagtgtg
atcgtcatggcatacacaactgaatttgtggacctgggcaatgtctcagccttacgcacc
ttccgagtcctccgggccctgaaaactatatcggtcatttcaggcctgaagacaatcgtg
ggagccctaatccagtctgtgaagaagctagccgatgtgatggtccttactgtcttctgc
ctcagtgtctttgccctcattggcctgcagctcttcatgggcaacctgaggcacaagtgc
gtgcgtaactttactgagctcaatggcaccaatggttccgtggaggccgatggcatagtc
tggaactctctggacgtctacctcaatgacccagccaattacctactcaagaatggcacc
acggatgtgttgctgtgtgggaacagctctgatgccgggacatgtcctgaaggctaccgg
tgcctgaaggcaggtgagaaccctgaccacggttacaccagcttcgactccttcgcctgg
gctttccttgcgctcttccgcctgatgacacaggactgctgggaacgtctataccagcag
accctgaggtccgcaggaaagatctacatgatcttcttcatgcttgtcatattcctgggc
tccttctaccttgtgaacttgatcctggctgtggtggccatggcttacgaggagcaaaac
caagccaccatcgccgagacggaagagaaggagaagcgtttccaggaggccatggagatg
ctcaagaaggaacacgaggctctcaccatcaggggcgtggatactgtgtcccgtagctct
ctggagatgtctcctttggccccagtaaccaaccatgagagaaggagcaagaggaggaaa
cgactgtcttcagggacagaggatggcggagatgacaggctccccaagtcggactcagaa
gacggtcccagagcattgaatcagctcagcctcacccatgggctcagccggacatccatg
aggccccgctccagccgagggagcattttcacattccggcgacgggaccaaggctccgag
gcagattttgcagatgacgagaacagtacagcaggagagagcgagagccaccgcacatcg
ctgctggtgccctggcccctgcgccgtcccagcacccaagggcagcccggctttggaacc
tcagctcctggtcatgtcctcaatggcaaaagaaacagcaccgtggactgcaatggggtg
gtttccttgctgggggcaggggacgcagaggccacctctccagggagccaccttctccgc
cctatagtgctggacagacccccagacacgaccacgccgtcagaggagccgggtgggccc
cagatgctgacaccgcaggctccatgtgcagatggctttgaggagcccggggcacggcaa
cgggcactcagcgccgtcagtgtcctcaccagcgctctggaagagttggaggagtcccac
cgtaagtgtccaccatgctggaatcgctttgcccagcattacctcatctgggagtgctgc
ccactctggatgtccatcaagcagaaggtgaagttcgtggtcatggacccgtttgctgac
ctcaccatcaccatgtgcatcgtgctcaacacgctcttcatggctctggagcactacaac
atgacagccgagtttgaggagatgctgcaggtcggaaacttggtcttcacgggaatcttc
acggcagagatgaccttcaagatcatcgcccttgacccatactactacttccagcagggc
tggaatatcttcgacagcatcatcgtcatcctcagcctcatggagctgggcctgtctcgc
atgggcaacctgtctgtgctgcgttccttccgtctgctgcgggtcttcaagctggccaaa
tcatggcccaccctgaacacactcatcaagatcatcgggaactctgttggtgccctgggg
aacctgaccctggtgctggccatcatcgtcttcatcttcgccgtggtgggtatgcagctc
ttcggcaagaactactcagagctgaggcaccgaatcagcgactctggcctgctgccccgc
tggcacatgatggacttcttccacgccttcctcatcatcttccgcatcctctgtggagag
tggatcgagaccatgtgggactgcatggaggtgtctgggcagtcgctgtgcttgctggtc
ttcctgctggtcatggtcattggcaaccttgtggtcctgaatctcttcttggccttgctg
ctcagctccttcagcgcagacaacctcacagcccctgacgaggatggggagatgaacaac
ctccagctggccctggctcgcatccaaaggggccttcgctttgtcaagcggaccacctgg
gacttctgctgcgggctcctgcggcggcgacctaagaagcccgcggctcttgccacccac
agccagctgcccagctgtatcgccgctcccaggtccccaccacccccagaggtggagaag
gcgcccccagcccgcaaggaaacacggttcgaggaagacaagcggccgggccagggcacc
cctggggataccgagcctgtgtgtgttcccatcgcagtggctgagtcagacactgatgac
caggaagaggatgaggagaacagccttggcacggaggaggaagagtccagcaaacagcag
gaatcccaagttgtgtctggtggccacgagcccccccaggagcccagggcctggagccag
gtgtcagagaccacatcctctgaagccgaggccagtacgtctcaggcagactggcagcaa
gagcgggaagcggagccccgggccccggggtgcggtgagactcccgaggacagttactcc
gagggtagcaccgctgacatgaccaacaccgcagacctcctggagcaaatcccagacctc
ggggaggacgtcaaggacccagaggactgcttcactgaaggctgcgtccgacgttgtcct
tgctgcatggtggacacgacgcaggccccagggaaggtctggtggagactgcgcaagacc
tgctaccgcatagtggagcacagctggttcgagactttcatcatcttcatgatcctgctc
agcagcggagcgctggccttcgaggacatctacctggaggagcggaagaccatcaaggtt
ctgctggagtacgccgacaagatgttcacctatgtctttgtgttggagatgctgctcaag
tgggtggcctacggcttcaagaagtacttcaccaacgcctggtgctggctggacttccta
attgtggacgtctcactggtcagcctcgtggccaacaccttaggctttgccgagatgggt
cccatcaagtccctgaggacactgcgtgcacttcgacccctgagggctttgtcacgattc
gagggcatgagggtggtggtcaacgcgctggtgggcgccatcccctccatcatgaatgtc
ctcctcgtctgcctcatcttctggctcatcttcagcatcatgggcgtgaacctcttcgcc
gggaagttcggtaggtgcatcaaccagaccgaaggggacctgcctctgaactacaccatt
gtgaacaacaagagcgagtgtgagtccttcaacgtgactggagagttgtactggaccaag
gtgaaagtcaactttgacaacgtgggggctgggtacctggccctgctgcaggtggcgaca
tttaaaggctggatggacatcatgtatgcggctgtggactccagagggtatgaagagcag
ccgcagtgggaggacaacctctacatgtacatctacttcgtcgtcttcatcatcttcggc
tccttcttcaccctcaacctgtttattggtgtcatcattgataacttcaaccagcagaag
aaaaagttagggggccaggacatcttcatgacggaggagcagaagaagtactacaatgcc
atgaagaagctgggctccaagaaaccccagaagcccatcccacggcctctgaacaagtac
cagggtttcatattcgacattgtgaccaagcaggccttcgatgttaccatcatgttcctc
atctgtttaaacatggtgaccatgatggtagagacagatgatcagagccctgaaaaagtc
aacatcttggccaagatcaacctgctcttcgtggccatcttcacaggagagtgtattgtc
aagatggctgccctgcgccactattacttcaccaacagctggaacatcttcgatttcgtg
gttgtcatcctctccatcgttggcactgtcctctccgacatcatccagaagtacttcttc
tccccaacgctcttccgtgtcatccgtctggccaggatcggccgcatcctcaggctgatc
cgaggagccaaggggattcgcacgttgctcttcgccctcatgatgtccctgcccgccctc
ttcaacatcggcctcctcctcttcctcgtcatgttcatctactccatcttcggcatggcc
aactttgcctacgtcaagtgggaggctggcatcgacgacatgttcaacttccagaccttt
gccaacagcatgctgtgccttttccagatcaccacgtcggctggctgggatggcctcctc
agccccatcctcaacacaggacccccctactgtgaccccaacctgcccaacagcaatggc
tccagggggaactgtgggagcccagcagtgggcatcctcttcttcaccacctacatcatc
atctccttcctcatcgtggtcaacatgtacattgccatcatcctggagaacttcagtgtg
gccacagaagagagcacagagcccctgagcgaggatgacttcgacatgttctatgagatc
tgggagaagttcgacccggaggccacccagttcattgagtatttggccctgtccgacttt
gccgatgccctgtctgagccactccgcatcgccaagcccaaccagataagcctcatcaat
atggacctgcccatggtgagcggggaccgcatccactgtatggacatcctgttcgccttc
accaagagggtgctcggggagtctggggagatggatgccctgaagatccagatggaggag
aaattcatggcggccaatccttccaagatctcctatgagcccatcaccaccaccctgcgg
cgaaaacatgaggaggtgtcggccacggtcatccagcgggccttccggaggcacctcctg
cagcgctcggtgaagcatgcttccttcctcttccgccagcaagcgggcagcagtggcctc
tctgatgaggatgcccccgagcgagagggactcattgcctacatgatgaatgagaacttc
tcccggcgcagcggtcccctctccagctcttccatctcctccacgtccttcccaccgtcc
tatgacagcgtcacgagggccaccagtgataacctcccagtgcgtgcgtcggactacagc
cgcagcgaagatcttgcagacttccctccatctccagatagggaccgagagtctatagtg
tga
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integrated database retrieval system
