Mus musculus (house mouse): 217827
Help
Entry
217827 CDS
T01002
Symbol
Nrde2, 6720454P05Rik
Name
(RefSeq) nrde-2 necessary for RNA interference, domain containing
KO
K26109
nuclear exosome regulator NRDE2
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
217827 (Nrde2)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
217827 (Nrde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_14
TAF4
TPR_12
Motif
Other DBs
NCBI-GeneID:
217827
NCBI-ProteinID:
NP_001277232
MGI:
2670969
Ensembl:
ENSMUSG00000021179
UniProt:
Q80XC6
LinkDB
All DBs
Position
12:complement(100091709..100126981)
Genome browser
AA seq
1172 aa
AA seq
DB search
MALFPAFADVSEASGDGAFRKELDWLSNPSFRVGNLTSLSRQTEEVTALASEGSPPPRYS
FIRSPLKSELSGESNTSEKLAQTSRKKKKEKKKRRKHQHHRKTKRRHEQLSSSGSESDTE
AGKDRASRSIRDDQKEAEKPCQGSNAAAAVAAAAGHRSIWLEDIHDLTDVFRTDKKPDPA
NWEYKSLYRGDIARYKRKGDSCLGINPKKQCISWEGASAAKKHSHRHLERYFTKKNVGLM
RTEGIAVCSNPEPASSEPVTFIPVKDSAEAATPVTSWLNPLGIYDQSTTQWLQGQGPAEQ
ESKQPDSQQDRENAALKARVEEFNRRVRENPWDTQLWMAFVAFQDEVMRSPGIYALGEGE
QEKHRKSLKLLLEKKLAVLERAIESNPGSVELKLAKLQLCSEFWEPSALAKEWQKLLFLH
PNNTSLWQRYLSFCQSQFGTFSVSKLHSLYGKCLSTLSAVKDGSMLSHPVLPGTEEAMFG
LFLQQCHFLRQAGHSEKVISLFQAMVDFTFFKPDSVKELPTKVQVEFFEPFWDSGEPRVG
EKGARGWRAWMHQQERGGWVLITPDEDDEEPEEEDQEIKDKTLPRWQIWLAVERSRDQRH
WRPWRPDKTKKQTEEDCEDPERQVLFDDIGQSLIRLSSPDLQFQLIQAFLQFLGVPSGFL
PPASCLYLAMDESSIFESELYDEKPLTYFNPSFSGISCVGSMEQLGRPRWTKGHNREGEE
FVRNVFHLVLPLLAGKQKSQLSLSWLRYEIAKVIWCLHTKKKRLKSQGKSCKKLAKNLLK
EPENRNNFCLWKQYAHLEWLLGNTEDARKVFDTALSMAGSSELKDRELCELSLLYAELEM
ELSPDSRGATTGRAVHILTRLTESSPYGPYTGQVSSTQVLKARKAYELALQDCLGQSCAS
SPAPAEALDCLGSLVRCFMLFQYLTVGIDAAVQIYGRVFAKLKGSARLEDPGPEDSTSSQ
SLTNVLEAVSMMHTSLLRFHMNVCVYPLAPLRETLSDALKLYPGNQVLWRAYVQIQNKSH
SANKTRRFFDTVTRSAKHLEPWLFAIEAEKLRKKLVESVQRVGGREVHATIPETGLTHRI
RALFENAIRSDKGNQCPLLWRMYLNFLVSLGNKERSKGVFYKALQSCPWAKVLYMDAMEY
FPDELQEILDVMTEKELRVRLPLEELELLLED
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttcccggcttttgcggacgtaagtgaggcctccggtgatggggcattcagg
aaagagttagattggctgagcaacccaagctttcgtgttggaaatctaacttctctgagc
cgacaaactgaagaggtcacagcccttgcttctgaagggtcaccaccgccaaggtactct
tttatcaggagtcctctgaagtcagagctctcaggtgagagcaacactagcgagaagctc
gcacagacaagcaggaagaagaagaaggagaaaaagaagagacggaagcatcagcaccac
aggaaaaccaagaggaggcacgagcagttgagcagcagcggctctgagtcagacacagag
gctgggaaggacagggcttcccggagcatcagggacgaccagaaggaagccgagaaaccc
tgtcagggaagcaatgcggctgctgctgttgctgctgctgctggacatcggtccatttgg
ctggaagatattcacgatctgaccgacgtcttcaggactgataagaagccagatcctgcc
aactgggagtataaatctctgtatcgtggggatatagcaaggtacaagaggaagggagac
tcctgcctgggtatcaatcctaagaaacagtgtatatcttgggaaggggcttctgcagca
aagaagcactcacacaggcacctggagcgctattttaccaagaagaatgtggggttaatg
agaacagagggcattgctgtgtgcagtaaccccgagcctgcctcctccgagcccgtcaca
ttcatcccagtgaaggactctgctgaggcagctactcctgttacatcatggctgaatcct
ctggggatttatgatcagtctaccacacagtggttacaaggacagggtccagcagagcaa
gagtcaaagcagccggactcgcaacaggacagggagaatgctgctctcaaggccagagtg
gaagagtttaacagaagggttcgggagaatccttgggacacgcaactatggatggcgttt
gtggctttccaggacgaggtcatgaggagtcctggcatctatgcccttggggaaggagaa
caggagaagcacaggaagtccctgaagctcctcctggagaagaagctggctgtgctggag
cgggccatcgagagcaacccaggcagcgtggagctgaagcttgccaagctgcagctgtgc
tcagagttctgggagcccagtgcgctggccaaggagtggcagaagctcctcttcctgcac
cccaacaacacaagcctgtggcagcgctatctctccttttgccagagccagtttggtacc
ttttctgtgtccaaactccacagtctgtatggcaagtgcttgagtaccttgtctgctgtt
aaagatggcagcatgctatcccaccctgtgttgccgggcaccgaggaggccatgtttggg
ctctttcttcagcagtgccactttctacggcaggctggccactcagagaaggtcatctct
ttgttccaggccatggttgacttcaccttcttcaagcctgacagtgtgaaagagctgcct
actaaagtacaggtggaattctttgagcccttctgggacagcggagaaccacgcgttggg
gagaagggagcccgaggctggcgggcgtggatgcaccaacaggagcgaggtggctgggtg
ctcatcaccccagatgaggatgacgaggagcccgaagaggaggaccaggagataaaagac
aagaccctgccccggtggcagatctggcttgctgttgagcgttctcgagaccagaggcac
tggcgtccctggcgccctgataagaccaagaagcaaacggaggaagactgtgaggaccct
gagagacaggtgctgtttgatgacattgggcaatctttgatcagactttccagcccagac
cttcagttccagctcatccaggcctttctgcagttcctgggcgtgccttccggcttcctg
cccccagcctcctgcctttacctggccatggacgagagcagcatctttgagagtgaactt
tatgatgaaaagcccctgacttacttcaacccttccttttcgggcattagctgtgtcggc
tccatggaacagttgggtcgccctcgctggaccaaaggtcacaaccgagagggcgaggag
tttgtccgcaatgtcttccacctggtgctgcctttgctcgcaggcaagcagaagtcccag
ctcagcctctcctggttacggtacgagattgcaaaggtcatttggtgtctacacactaaa
aagaagcgattgaagtctcagggaaagagctgcaaaaaactagccaagaatctcctcaag
gagccagaaaaccgcaacaacttctgcctctggaagcagtatgcacacctggagtggttg
ctcggtaacacagaggatgccagaaaagtgttcgacacagcactcagcatggcaggcagc
agcgagctgaaggaccgtgaactctgcgagctcagtctgctctatgccgagctggagatg
gaactgtcgccggactcgagaggagccaccacaggccgagcggtccacatattaacacgg
ctgacggagagcagtccctacgggccctacacggggcaggtctcgtccacccaggtgctg
aaagctcggaaggcttacgagctcgcgctgcaggactgcctgggccagagctgtgcctcc
agcccagctcctgcagaggccttggactgcctgggtagcttggtccgatgctttatgctc
ttccagtatttgactgtgggcattgatgctgctgtgcagatatacggaagggtgtttgcc
aagctgaagggctctgctcgcttagaagacccagggccagaggacagcaccagctcccag
agtttgaccaatgtgctcgaggctgtcagcatgatgcacacaagcctgctgcgattccac
atgaacgtttgtgtttaccctctggctccactccgagagaccctctccgatgctttaaag
ctgtatccgggcaaccaggttctttggagggcttatgtacagattcagaataagtcccac
agtgctaacaagaccagaaggttctttgacacagttactaggtctgccaaacatttggag
ccttggctatttgcaatcgaagctgagaagctgaggaaaaagctagtggaatctgttcag
agggtaggaggcagagaggtccatgcaacaatccccgagactggccttacgcatcgcatc
agagctttgtttgaaaatgcgattcggagcgacaagggcaaccagtgtcccctactgtgg
aggatgtatttgaattttttggtttccttaggaaacaaagaaagaagcaaaggcgtgttc
tacaaggccctccagagctgtccttgggcaaaggtgctatacatggacgccatggagtat
ttcccagacgagctgcaggagatcctggacgtgatgaccgagaaggagctccgtgtgcgc
ctgccccttgaggagctggagctgctgctggaggattag
DBGET
integrated database retrieval system