Mus musculus (house mouse): 68094
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Entry
68094 CDS
T01002
Symbol
Smarcc2, 5930405J04Rik
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03082
ATP-dependent chromatin remodeling
mmu04714
Thermogenesis
mmu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
68094 (Smarcc2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
68094 (Smarcc2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
68094 (Smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmu03021
]
68094 (Smarcc2)
03036 Chromosome and associated proteins [BR:
mmu03036
]
68094 (Smarcc2)
Transcription machinery [BR:
mmu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
68094 (Smarcc2)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
68094 (Smarcc2)
PBAF complex
68094 (Smarcc2)
GBAF(ncBAF) complex
68094 (Smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
68094
NCBI-ProteinID:
NP_001107569
MGI:
1915344
Ensembl:
ENSMUSG00000025369
UniProt:
Q6PDG5
LinkDB
All DBs
Position
10:128294823..128326460
Genome browser
AA seq
1213 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIVKRHQGTISEDKSNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVSDDKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQDDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKPPQQSSASQQMLNFPEKGKEKPADMQNFGLRTDMYTKKNVPSKSKAAASATRE
WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLA
YQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVE
EAAKVTGKADPAFGLESSGIAGTASDEPERIEESGTEEARPEGQAADEKKEPKEPREGGG
AVEEEAKEEISEVPKKDEEKGKEGDSEKESEKSDGDPIVDPEKDKEPTEGQEEVLKEVAE
PEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLE
IKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQ
QPPTLPPGSQPIPPTGAAGPPTVHGLAVPPAAVASAPPGSGAPPGSLGPSEQIGQAGTTA
GPQQPQQAGAPQPGAVPPGVPPPGPHGPSPFPNQPTPPSMMPGAVPGSGHPGVAGNAPLG
LPFGMPPPPPAAPSVIPFGSLADSISINLPPPPNLHGHHHHLPFAPGTIPPPNLPVSMAN
PLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPTA
PSPGTVTPVPPPQ
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctctggctcggcaagaactacaagaagtacatacaa
gcagaaccgccaaccaacaagtctctgtccagcctggtggtgcagttgctccagtttcag
gaagaggtttttggcaaacatgtcagcaacgcaccgcttactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggatccctctgccatattcttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaat
gtggaaatgttcatgaccattgagaagtccttggtacagaataattgcctgtcacgacct
aacattttcctctgcccagaaattgagcccaaactgctagggaaattaaaagacattgtt
aagagacaccagggaaccatctctgaggataagagcaatgcctcccatgttgtgtatcct
gtcccagggaacctagaagaagaggaatgggtacggccagtcatgaagagggataaacag
gttcttctgcactggggctactatcctgacagctacgacacgtggatcccagcgagtgaa
attgaagcatctgtggaggacgctcccactcctgagaaaccgaggaaggtccatgcgaag
tggatcctcgacaccgacacattcaacgagtggatgaatgaggaagactacgaagtcagt
gacgacaaaagcccagtctcccgcaggaagaagatctcagccaagacgctgacagacgag
gtaaacagcccagattcagacagacgagacaagaaggggggcaactataagaagaggaag
cgctctccctctccttcacccaccccagaggctaagaagaaaaacgctaagaaaggaccc
tcaacaccttataccaagtcaaagcgaggccacagagaagaggaacaagaagacctgaca
aaagacatggatgagccctctccagtcccaaacgtggaagaggtgacactccccaaaaca
gtcaacactaaaaaggactctgagtcagccccagtcaaaggcggcaccatgactgacctg
gatgaacaggacgatgaaagcatggagaccaccggcaaggacgaggatgagaacagcacg
ggcaacaaaggcgagcagacgaagaacccggacctgcatgaggacaatgtgaccgagcag
acccaccacatcatcatccccagctacgccgcctggtttgactacaacagcgtccatgcc
attgaacggagggctcttcctgagttcttcaacggcaagaacaagtctaagactccagag
atctacctggcgtatcggaacttcatgattgacacttaccgactgaatccccaggagtat
ctaacatctactgcctgtcggcggaatttggcgggtgatgtctgcgctatcatgagggtc
catgccttcctggaacagtggggtcttattaactaccaggtagatgctgagagccgacca
accccaatggggcctccacccacctctcacttccatgtcttggcggacacaccatcaggg
ctggttcctcttcagccgaagcctccacagcagagctctgcttcccagcaaatgctgaac
ttccctgagaagggcaaggagaaaccagcagacatgcagaattttgggctgcgcacagac
atgtacacaaagaagaacgtcccctccaagagcaaagctgcagcaagtgccactcgggaa
tggacggagcaggagactctgctgctcctggaggctttggaaatgtacaaggacgactgg
aacaaagtatctgagcacgtgggaagccgcacgcaggacgagtgcatcttgcattttctc
cgccttcccattgaagacccatacctggaggactcggaggcttctctaggccctctggcc
taccaacccatccccttcagtcagtcaggcaaccctgttatgagcaccgttgccttcctg
gcctctgtcgtcgatccccgagttgcctctgctgctgcgaagtcagccctagaagagttc
tcaaaaatgaaggaagaggtgcccacagctttggtggaagcccacgtgcgtaaggtcgaa
gaagcggccaaagtcacaggcaaggccgacccagcctttggtctggagagtagcggcatc
gcagggactgcctctgatgagcctgagcgcattgaggaaagcgggactgaggaggcacgg
ccagagggccaggcagcagatgagaagaaggagcctaaggaaccacgggaaggagggggc
gctgtggaggaagaagcaaaggaggaaataagtgaggtccccaagaaagatgaagagaaa
gggaaagaaggtgacagtgagaaggagtctgagaagagtgacggggacccgatagttgat
cctgagaaagacaaggaaccaacagaagggcaggaggaagtgctaaaggaagtggcagag
ccagagggggagaggaaaaccaaggtggagcgtgacattggtgaaggcaacctgtccaca
gctgcagccgcagccctggccgctgctgcagtcaaggccaagcacttggctgcagttgag
gagagaaagatcaagtctttggtggctctgctggtagagacccaaatgaagaaactagag
atcaaactccgacattttgaggagctggagacaataatggaccgggagcgagaggcgctg
gaataccagaggcagcagctcctggccgaccggcaagccttccacatggagcagctgaag
tatgcagagatgagggcccggcagcagcacttccagcagatgcaccagcagcagcagcag
cagccaccaaccttgcccccaggctcccagcccatacctcccaccggggctgctggacca
cctacagtccatggtctagctgtgcctccagccgctgtggcctctgcccctcctggcagt
ggggcccctcctggaagcttgggcccttctgaacagattgggcaggcagggacaactgca
gggccacagcagccacaacaagctggagcccctcagcctggggcagtcccaccaggggta
cccccccctggaccccatggcccctcaccgttccccaaccaaccaactcctccctcaatg
atgccaggggcagtgccaggcagcgggcacccaggcgtggcgggtaatgctcctttgggt
ttgccttttggcatgccgcctcctcctcctgctgctccatccgtcatcccattcggtagt
ctagctgactccattagtattaaccttccccctcctcctaacctgcatgggcatcaccac
catctcccgtttgccccgggcactatccccccacctaacctgcctgtgtccatggcgaac
cctctacatcctaacctgccggcgaccaccaccatgccatcttccttgcctctcgggccg
gggctcggatccgccgcagcccagagccctgccattgtggcagctgttcagggcaacctc
ctgcccagtgccagcccactgccagacccaggcaccccgctgcctccagaccccacagct
ccaagcccaggcacagtcacccctgtgccacctccacagtga
DBGET
integrated database retrieval system
