Mus musculus (house mouse): 71389
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Entry
71389 CDS
T01002
Symbol
Chd6, 5430439G14Rik, 6330406J24Rik, CHD-6
Name
(RefSeq) chromodomain helicase DNA binding protein 6
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
mmu
Mus musculus (house mouse)
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmu03036
]
71389 (Chd6)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
71389 (Chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
71389
NCBI-ProteinID:
NP_775544
MGI:
1918639
Ensembl:
ENSMUSG00000057133
UniProt:
A3KFM7
Q8BJ75
LinkDB
All DBs
Position
2:complement(160788898..160951006)
Genome browser
AA seq
2711 aa
AA seq
DB search
MKMKIQKKEKQLSKLRALNHSPMSDASVNFDYKSPSPFDCSPDQGENIEEAANHCLPHKN
LYTTEEEADTLFSRKLTSHNGMEDSGGRGTGVKKKRKKKEPGEQEGTKGSKDREPKPKRK
REPKEPKEPRRAKEPKRAKEPKETKQKDGVKKPRKHREASGTKEGKEKRSCTDYGSRTKS
KKASREQGPTPVERKKKGKRKNETTVESLELDHSLPNPSLQSPEEPSESADSQKRRSGRQ
VKRRKYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASK
TVQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHI
FTEPDEDLFNPDYIEIDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPA
KVKEFESLQILPEVKHVERPASDAWQKLETSREYRNSNRLREYQLEGMNWLLFNWYNRKN
CILADEMGLGKTIQSIAFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHG
SQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAH
RLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGD
LKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSF
LTKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSSEASDFQLQAMIQA
AGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAA
IDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKA
VKVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKGSTNGVQQLSKMEVEDLLRKGAY
GALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPN
FWQKWAKIAELDTEANNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTR
SRRLSDRARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWPLNEKDMEMICRALLVYC
VKHYKGDEKIKSFIWELITPSKDGQVQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKNA
DWLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYYLKAEILGEAADKAFEGTPARELD
VLLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSLS
AEQGVTDGTSDIPERGNIDKEDSAEDKLDGLQKQTASPSDGSDGIFGEKKDDSQAAQDGS
DPDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPEILGPGNQGYWVQEEVFRRTSEMDL
INKEAQKRWTRREQADFYRTVSSFGVVYDQEKKAFDWTQFRIISRLDKKSDESLEHYFYS
FVAMCRNVCRLPAWKDDGPPDASIYVEPITEERAAKTLYRIELLRKVREQVLMCPQLHER
LQLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRT
DTQAPGSLCCLYQSNSKLYESLTYTPVSRTSESLESEPENLMRMESRDDHLCLPEGGLPD
ITCENFVSKVQEVISLDHDENLLPESLENMIYGKTGLSQEPHSFQEAPTTNTQSRKNTIT
ISASRNESCQPPGIEAEITSASSLMSSLEAGVAKMNIKNGKHLLVSISKEGEPCCSETGR
RPETIGHREAKCLVSPTLDTGHESGFVDLCSLSVYDPKRNFSSDQQLIDLLENKSLESKL
ILNQSDEEEEENEDETLAIVASATEKPEVLDFPKPTVNIPRGKNLSFHQDEAKKGRLEVV
SKTAGPQRVFPPPANQCHCKHIERWAHGLGSEDSEVEKPKAYQPDLYRSKANNSTVEGET
AVIPTEPFKLKHELLKEPWKESSEGGKSFSMYAPEGSEPKPEDMDFENKDDYEKDGTCLS
QDYPGKYSEEESKSSASGIAGDLGEEAQEVRAPTIAQLLQEKTLYSFSEWPKDRVIINRL
DNICHVVLKGKWPCSHQYEPSGALPTPVLSSSAGSRSSLSEPEATEHGFSNGAALAAQIQ
KESFLAPVFTKDEQKHRRPYEFEVERDAKARSLEEYSATHGRPPIVLNGWHGESAIDLSC
SSEGSPGATSPFPVSASTPKIGAISSLQGALGMDLSGILQAGLIHPVTGQIVNGSLRRDD
AAMRRRRGRRKHIEGGMDLIFLKEQTLQAGILEVHEDAGQTTLSTTHPEVPGATSSAPEP
TAAASSQAEKAVPSKSLLDWLRQQADYSLDVPGFGTSFSDKPKQRRPRCKEPGKLDISSL
GGEERVPAVPKEPGLRGFLPESKFNHTLAEPVLRDAGPRRRGRRPRNELLKAPAIVADSP
SGMGPLFMNGLIAGMDLVGLQNVRNIPGIPLTGLVGFPAGFATMPTGEEVKNTLSMLPMM
LPGMAAVPQMFGVGGLLNTPMATTCTTTASASLASTKSGTSATEKSTEDKLSGHDVNTDA
LVDDKPGPSPFSDQSEPTITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPAMQQA
RHSEMVGLETQKRKKKKTKGDSPTQEPASVCEKEPGSDQNCTESSATVSPEREHVAQARE
EGLKDSNEDTN
NT seq
8136 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaaatacagaagaaagagaagcagttgtccaagttaagagctttgaatcac
tccccaatgtcggatgcctctgttaactttgactacaaatctccgtcaccattcgattgc
agtcctgatcagggagagaacattgaagaagctgccaatcattgtctgccccataagaac
ctctatactactgaagaggaagctgacacccttttttctaggaaattgacatcccataat
gggatggaggatagtggaggcagaggtactggagtaaagaagaaacggaagaaaaaggag
ccaggggagcaagaggggacaaagggaagcaaggacagagagcctaagccaaagaggaag
cgagaacctaaagagccaaaagaacccagaagggccaaggagccgaagagagccaaggag
cccaaggagacaaagcagaaagacggtgtcaagaagccccggaagcaccgggaggcctcc
ggtaccaaggaaggtaaagagaagagaagctgcactgattatggatccaggacaaagtcc
aagaaggccagcagggagcaaggaccaaccccagtggagagaaagaagaaaggaaaaagg
aaaaacgaaaccaccgtggagagtttagagctggaccacagtcttccaaacccatctctg
cagagccctgaggagcccagtgagtctgcagacagccagaaacggcgctcaggacggcaa
gtaaagcgcagaaaatacaatgaggacctggacttcaaagtggtggatgacgatggggaa
acaattgctgtcctgggagctggccgcacatctgcactctcggcttccactctggcctgg
caggctgaggagcctccagaagatgatgcaaacataattgagaagatcctggcatccaag
actgtccaggaggttcacccaggagaacctccattcgacctagagcttttctacgttaag
tatagaaatttttcctatttacattgtaaatgggccacaatggaagaactggaaaaggat
ccccgcatcgcacagaagatcaagcgatttaggaacaaacaggcccagatgaagcacatt
ttcactgagcctgatgaagacttgttcaatccagattatatagaaattgatcgtatctta
gaagtggcccacaccaaggatgcagaaacaggggaggaagtaacacattacctggtaaaa
tggtgctccctgccatatgaggaaagcacctgggagctagaagaagatgtggatcctgca
aaagtgaaggaatttgaatctctacaaattctccctgaagttaaacatgtggaacgacct
gcctctgatgcgtggcagaaactggagacatcccgtgagtataggaacagtaaccggctg
cgagagtaccaactcgaggggatgaactggcttcttttcaactggtacaacagaaaaaac
tgtatattggctgatgaaatgggcctagggaaaaccatccagtccatcgcattcctttca
gaaatctttgtcagaggaatccacggcccctttctcatcattgccccactttccaccatc
actaactgggagcgagaattccggacatggacggagatgaatgctattgtgtaccacggc
agccagatcagcaggcagatgatccagcagtacgaaatggtatacagagatgcacaggga
aaccccctttcaggagtcttcaagttccacgtcgtcatcacaacgtttgagatgatcctg
gcagattgcccagagctgaagaaaattcactggagctgtgtgataattgatgaggcccac
agactgaagaataggaactgcaaacttctggaagggttaaagctcatggccctggaacac
aaagtgctgctcacaggaacacccttgcagaactctgtggaagagctcttcagtttgctt
aactttctggagccctcgcagttcccttcagagactgccttcttagaggagtttggtgat
ctcaaaacagaagaacaggtaaagaaattgcagtctatcctaaaaccaatgatgcttcgg
cgcctgaaagatgatgtggagaagaaccttgctcctaagcaagagaccatcattgaagta
gaactgaccaatatccagaaaaagtactatcgtgctatcctagagaaaaacttttccttc
ctgaccaaaggtgcaaatcaacacaacatgcccaatcttatcaatactatgatggagctc
agaaaatgctgtaaccacccctacctgatcaatggggccgaggaaaagattctggaagat
ttcagaaaagcgcacagctccgaagcctctgacttccagctgcaggccatgatccaggcg
gccgggaagctggtgctgattgacaagcttctccccaagctcattgccgggggccacaaa
gtgctcatcttctcgcagatggtgcgctgcctcgacatcctggaagattatctcatccag
aggagatacacctatgagcgaattgatgggcgagtacggggaaacctgcgccaggcagcc
atcgaccggttctgtaagccagactcagaccgctttgtctttcttctgtgcaccagagcg
ggaggcctgggaatcaatctcacagctgctgatacctgcatcatatttgattctgactgg
aacccacaaaatgacttgcaggctcaggcccgatgtcatcgtataggccagagcaaagcc
gtgaaggtatatcgcctaatcactcgaaactcctatgagcgggaaatgtttgacaaggcc
agcctgaagctgggcctggacaaggctattcttcaggacatcaaccgaaagggcagcacc
aatggagtacagcagctctcaaaaatggaagtggaggatttgctccggaaaggtgcttat
ggggctttaatggacgaggaagacgaaggctccaagttctgtgaggaagatatagaccag
atcctgcagagaagaacccacaccatcaccatccagtcagaaggcaaggggtccactttt
gccaaggctagtttcgtggcttcaggaaacagaacagatatttccttggatgaccctaat
ttttggcagaaatgggctaaaatagctgaattagacactgaagcaaataatgaaaaggaa
agcttagtgattgaccggccgcgtgtgaggaagcagaccaagcactacaactcttttgag
gaggacgagctcatggagttctcagagttagacagcgactcagacgaaaggcccacacgg
tccagacgcctcagcgacagagcccgacgctacctccgcgctgagtgcttccgagtggag
aagaacctgctcatctttggctggggccggtggaaggacatcctgactcacgggcgattc
aagtggcccctgaatgagaaggatatggagatgatttgcagggctctgctggtgtactgt
gtcaagcattacaaaggggatgagaaaatcaaaagttttatttgggaactaatcacacct
tccaaagacgggcaagttcagaccctccagaaccactcaggcttgtctgccccagtcccc
agagggaggaaaggaaaaaagacaaaaaaccagctcttgctcccagaactgaagaatgca
gactggctggccacctgcaatcctgaggtggtcttacatgatgatggatacaagaaacac
ctcaaacagcattgcaataaggtgcttttgagagtccggatgctgtactacctaaaagct
gaaatactgggagaagcagctgataaagcattcgagggaactcctgccagagagctggat
gtgcttctgcctgacattgactatgtggagatcccagtggattggtgggacgctgaagct
gataagtcccttctcattggcgtgttcaagcacgggtatgagaggtacaatgccatgcgg
gctgacccagcgctctgcttcctagagaaagttggcatgcctgatgagaagtccctttct
gcagagcagggagttacagatggaacttcggacattcctgaaagaggcaacatagataaa
gaagacagtgctgaggacaagttggatggtctccagaagcaaacggcgagtcccagtgat
ggaagtgatggcatttttggtgaaaagaaggatgacagccaggcagcccaggatggctcc
gacccagacaaatcaccctggccagtttcctctgccctcactgctcgactcaggcgtctg
gtcactatttaccagcgctgcaaccgcaaggagctatgcagacctgaaatcttaggccca
ggtaaccaaggatactgggttcaggaggaagtgttcaggagaacttcagaaatggacctc
atcaacaaggaagcccaaaaaaggtggactagaagagagcaagctgacttctataggaca
gtgtcttcctttggtgttgtgtatgaccaagaaaagaaagcctttgactggacacagttc
cgcatcatttctcgtttggacaagaagtcagatgagagcctggagcactatttttatagc
tttgtagccatgtgtcggaatgtgtgtcgtctccccgcatggaaagatgatggtccccct
gatgccagcatctatgttgaacccatcactgaggagcgggcagcaaagactctataccgt
attgaactgctgaggaaagtccgtgagcaggtgctcatgtgtcctcaactacatgagcgc
ctccagctttgcaggcccagcctctacctcccagtctggtgggagtgtgggaaacatgat
cgagacctgctcattggcaccgccaaacatgggctcaaccgcactgactattacatcatg
aatgacccccagctatccttcctagatgcctatagaaactatgcccaacacaaaagaact
gacacccaggcacctggaagtctctgttgcctttaccagagcaattctaaactatatgag
tctcttacttacaccccagtgagtaggacttcagagtctcttgaaagtgagccagagaat
ctgatgagaatggaaagcagggatgatcatctctgcctgcctgagggcggcttacctgac
ataacgtgtgaaaactttgtttccaaagttcaggaggtcatttctcttgaccatgatgaa
aacttgctgcctgagtctttggagaacatgatatatggtaagacaggactcagccaagag
ccgcattcttttcaggaggccccaactaccaacacacagtccaggaaaaatactatcacc
atctcagccagcagaaatgagagctgccagcctcctggtattgaggcagaaattacttca
gcttcctctctcatgagcagcttagaagcaggagtagctaaaatgaatattaaaaatgga
aaacatttgctggtatctatctcaaaagaaggggagccctgctgcagtgagacaggacgg
agacctgaaaccataggccaccgagaggccaaatgcttagtgtcccctaccttagataca
ggacatgaaagtgggtttgtagatctatgtagtcttagtgtctatgaccccaaaagaaac
ttctcctcagatcagcaattaattgacttattagaaaacaagagtttagaaagtaagttg
attttaaatcagagtgatgaggaagaggaagaaaatgaggacgaaaccttagccatagta
gcaagcgccacagaaaagccagaggtcttggatttccccaagcccactgtaaacatccca
agggggaagaacctcagcttccaccaagatgaagccaagaaaggaaggctggaggtggtg
agcaagactgctggaccacagagggtctttcctcccccagccaatcagtgccactgtaaa
cacatcgaaaggtgggcacatggcctggggagcgaggactctgaagtagagaaacccaag
gcttatcagccagacctgtacagaagcaaagccaataattccacagtggaaggtgagact
gctgttattccaacagagccatttaaactgaagcatgagcttttaaaagaaccatggaaa
gaaagttcagaggggggaaagagtttctccatgtatgctcctgagggaagtgagcccaaa
ccagaagacatggattttgagaataaagatgattatgagaaagatggaacctgcctcagt
caagactacccaggcaaatactctgaggaagagagtaagagttcggcatcaggcattgca
ggagaccttggggaagaggcacaggaagtgcgggctcccaccattgctcagctactgcag
gagaaaaccctctattccttctcagaatggccaaaggatcgtgtgataattaaccgccta
gataatatttgccatgtggtgttaaaggggaagtggccctgcagccaccagtatgagccc
tcaggtgcactgcccacaccagtgttatccagcagtgcaggttctcgaagcagcctctca
gagccagaagcaacagagcacggcttcagcaatggtgcagcactggcagcccagatccag
aaggagagcttcttagccccagtattcacaaaagatgaacaaaagcacagacgtccctat
gagtttgaggtggaaagggatgccaaagctcggagcctagaagaatactctgccacccat
gggcgtccgcccattgtcctcaatggctggcatggggagtcagctatagacctctcctgc
tcctcagaggggtctccaggagccacatctcctttcccagtgagtgccagcacccctaag
attggtgctatcagttcacttcaaggagctctcggtatggacttgtctggaattctgcaa
gctggtctaatccacccagtgactgggcagattgtcaacggaagcctcaggagggatgat
gctgccatgagaaggcggagaggaaggcgaaaacatattgagggagggatggacctcatc
ttcctgaaggagcaaacacttcaggctggaatcttggaagtccatgaagatgcagggcag
actaccctgagcaccacacaccctgaagtgccaggagctacttcctcagctcctgagcca
acagcagcagccagcagccaggctgagaaagctgttcccagcaagagcctacttgactgg
ctgaggcagcaggctgactactctttggatgttcctggctttgggacaagtttttcagac
aaacccaagcagaggagaccacgctgcaaagaacctggaaaattagacatcagctctcta
ggtggagaagagagggttcctgctgtccccaaggagccaggactgagggggtttctccca
gaaagcaaattcaatcacaccctagctgagcctgtgcttcgagatgcgggtccccgcagg
agggggaggcggcctcgaaatgaactcctaaaagctccagccattgtagcggactctcct
tctggaatgggaccactgttcatgaatgggctgattgcgggaatggacctggtaggattg
cagaatgtgagaaatattccaggcattcctctcactgggctggtgggcttcccagctggt
tttgccaccatgcccacgggtgaagaggttaagaacaccctgagcatgctgcccatgatg
ctgccaggcatggccgcggtgccccagatgtttggagttggcggactcctcaacacaccc
atggcaaccacctgcacgaccactgcttcagcgtctcttgcaagcacaaaaagtggtacc
tcagccactgaaaaatctacagaggacaagctgagtggccatgatgtaaacacagacgct
ctggtagacgacaagcctggccctagtccgttttctgatcagtcagaacccacaataact
actagtagtcctgtggctttcaacccatttctcatcccaggagtgtctcctggactcatc
tacccttccatgtttctttcccctggcatgggcatggctctgccagccatgcagcaggcc
agacactcagagatggtcggtcttgagacccagaagaggaaaaagaagaaaactaagggg
gacagccccacccaagagcctgcgtctgtgtgtgaaaaggagccaggcagtgatcagaac
tgcaccgagtccagtgccactgtgtccccagagagagaacacgtggcacaggccagggag
gaggggctcaaagactccaatgaggataccaattag
DBGET
integrated database retrieval system
