Marinomonas sp. MWYL1: Mmwyl1_2378
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Entry
Mmwyl1_2378 CDS
T00567
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mmw
Marinomonas sp. MWYL1
Pathway
mmw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mmwyl1_2378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmw03019
]
Mmwyl1_2378
03009 Ribosome biogenesis [BR:
mmw03009
]
Mmwyl1_2378
Enzymes [BR:
mmw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Mmwyl1_2378
Messenger RNA biogenesis [BR:
mmw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Mmwyl1_2378
Ribosome biogenesis [BR:
mmw03009
]
Prokaryotic type
rRNA helicases
Mmwyl1_2378
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABR71300
UniProt:
A6VXX1
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All DBs
Position
complement(2686636..2688534)
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AA seq
632 aa
AA seq
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MSDADTQPTFDSLGLIAPVLKAVADLGYEQPSAIQAQSIPYLLEGRDLLGQAQTGTGKTA
AFALPLLSRIDVTDKTTQLLVLAPTRELAIQVSEAFQSYARNLPDFHVLPIYGGMSYDTQ
LRQLKRGVQVVVGTPGRVMDHIRRKTLKLDGIKALVLDEADEMLRMGFIDDVEWILEQTP
PTRQIALFSATMPAVIRQVANRHLNNPKEVKIVTKTSTAMTITQKYWPVSGLHKLDALTR
ILEMNEHDGMIIFVRTKAATVELAEKLTARGHACEALNGDISQNLRERTVDRIKKGQIDI
LVATDVVARGLDVERVSHVVNYDIPYDTESYVHRIGRTGRAGRSGTAILFVAHRERRMLQ
AIERATRQPIESMTLPTASDINAHRVNRFKQSITDAMDNEDLDFFLELVQSYQKENEVDP
LKMAAALAHMAQGKTPLLLSEMEVRQERRERREDRDSPRGERGDRGDRGDRAPRERKVRP
VTAEAMPLKDDPDTSMTRYVVQVGYSDGVKPGNIVGAIANEADIESRYIGHIEIYEDFAT
VDLPSNLSADALGKLGKTRICGQRTDIAKLENADELNKRAAAPSTRKRPASGDRRPSNGG
ERRRPSAGAGGGRDRDANRSGERRPRAPRKNA
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgctgatactcagcctacatttgattcgttgggtctaatcgcccctgttctt
aaagcggttgctgacctaggttacgagcaaccatctgctatccaagcgcaaagtattcca
tatctattagaaggtcgagaccttttggggcaagcgcagacgggtactggtaagacagca
gcgttcgcgctaccgttactgtctcgcattgatgttacagataaaacgacacaattactt
gtactggctccaacccgtgaacttgctattcaagtttctgaagcatttcaaagttatgct
cgtaatcttccagattttcatgttctgccaatttacggcggcatgtcatacgacactcaa
cttcgccaactaaaacgcggagttcaagtagttgttggtacacctggtcgtgttatggat
cacattcgtcgtaaaacattgaaactagatggtattaaagccctagttcttgatgaagcg
gatgagatgttacgtatgggattcatcgatgatgtcgaatggattcttgagcaaacacca
ccaactcgtcaaatcgctttgttctctgcgactatgcctgccgtgattcgtcaggttgct
aatcgtcatttgaacaatccaaaagaagttaagattgttactaaaacttctacggcaatg
acgattacgcaaaaatactggcctgtaagtggtctacataagttagacgctttgacacgt
attcttgaaatgaacgaacatgatggcatgatcatcttcgttcgtactaaggccgcaact
gttgagttggctgaaaagctaacggctcgtggtcacgcttgtgaagccttgaatggtgat
atcagccagaatttacgtgaacgcacagttgatcgtattaagaaaggtcaaattgacatt
cttgttgcaacagacgttgtggcacgtggtttggacgtagaacgtgtaagtcacgttgtt
aactatgatatcccatacgatactgagtcttatgttcaccgtatcggtcgtactggtcgt
gctggtcgttcaggtacagcgattttgttcgttgctcatcgtgagcgtcgtatgttgcaa
gctattgagcgagcaactcgtcagccaatcgaaagtatgacattgccaactgcttcagat
attaatgcgcaccgtgttaatcgcttcaagcagagcattacggacgcaatggataacgaa
gacttagatttcttcctagagcttgttcaaagctaccagaaagaaaatgaagttgatcca
ttgaaaatggcggctgctttggctcatatggctcaaggtaaaacaccactattattgtct
gaaatggaagttcgtcaagaacgtcgagagcgtcgtgaagatcgcgatagccctcgtggt
gagcgcggagatcgtggtgaccgtggagatcgtgcgcctcgcgaacgtaaggttcgtccg
gttacggcagaagctatgccattaaaggatgatcctgatacgtctatgacgcgttatgtt
gttcaagttggctacagcgacggcgttaaacctggcaacatcgttggtgcaattgctaat
gaagctgatattgaaagccgctatataggccatatcgaaatttatgaagatttcgctaca
gtcgatttgccttctaacctaagtgcagatgcattaggtaaattgggtaaaacacgtatt
tgtggtcagcgtactgacattgctaagctagagaatgcggatgagttgaataagcgtgct
gcagcaccttctactcgtaagcgtccagctagtggtgatcgtcgcccatctaatggtgga
gagcgtcgtcgtccaagcgctggtgccggtggtggtcgtgaccgcgatgcaaatcgcagt
ggcgaacgtcgtccaagagcaccacgtaaaaacgcttaa
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