Myotis myotis (greater mouse-eared bat): 118657497
Help
Entry
118657497 CDS
T07220
Symbol
LIG1
Name
(RefSeq) DNA ligase 1 isoform X1
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
mmyo
Myotis myotis (greater mouse-eared bat)
Pathway
mmyo03030
DNA replication
mmyo03410
Base excision repair
mmyo03420
Nucleotide excision repair
mmyo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118657497 (LIG1)
03410 Base excision repair
118657497 (LIG1)
03420 Nucleotide excision repair
118657497 (LIG1)
03430 Mismatch repair
118657497 (LIG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmyo03032
]
118657497 (LIG1)
03400 DNA repair and recombination proteins [BR:
mmyo03400
]
118657497 (LIG1)
Enzymes [BR:
mmyo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
118657497 (LIG1)
6.5.1.6 DNA ligase (ATP or NAD+)
118657497 (LIG1)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
118657497 (LIG1)
DNA replication proteins [BR:
mmyo03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
118657497 (LIG1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
118657497 (LIG1)
DNA repair and recombination proteins [BR:
mmyo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
118657497 (LIG1)
NER (nucleotide excision repair)
Other NER factors
118657497 (LIG1)
MMR (mismatch excision repair)
Other MMR factors
118657497 (LIG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
DDR
PucR
Motif
Other DBs
NCBI-GeneID:
118657497
NCBI-ProteinID:
XP_036167440
LinkDB
All DBs
Position
Unknown
AA seq
930 aa
AA seq
DB search
MQRSIMSFFHPTKEGKAKKPEETPSSAREAEPPPKVALKERNRVVPESDSPVKRSGRKTA
RVLCSEGEEEEDDEAITSPKGQKPAPSSPQVSPPAPVTSPESSPSLSGPSPAATISPSGI
PKRLTARKQFSKRKIQDVLEEHSTDKGPEAKRKKVEEEAETPTENLPQPEGAKEKKAEEG
DLPMTPPEPQNACKAEPPTESGSEPVVAVKQEPQDEEPARPPPRAPKMLSSLFTPRKPAV
KQEVKEEGPGTPRKEASKGLSHSDVSSSPLDPSSYNPAKKNYHPVQDACWTRGQKVPYLA
VARTFEKIEEVSARLRMVETLSNLLRSVVALSPPDLLPILYLSLNCLGPPQQGLELGVGD
GVLLKAVAQATGRQLELVRAEAAETGDVGLVAENSRSTQRLMLPPPALTASGVLAKFRDI
ARLTGSASTTRKMDIIKGLFVACRHSEARFITRALSGRLRLGLAEQSVLAALAQAVSLTP
PGQEFPPAVVDAGKGKTAEARKTWLEEQGMILKQTFCQVPDLDRIVPVLLEHGLEGLPEH
CKLSPGVPLKPMLAHPTRGVSEVLKRFDEAAFTCEYKYDGQRAQIHFLEGGEVKIFSRNQ
EDNTGKYPDIISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDAAEI
QVQVCLYAFDLIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDMDQIAEFL
EQSVKDSCEGLMVKTLDVDATYEIAKRSHNWLKLKKDYLQGVGDTLDLVVIGAYLGRGKR
AGRYGGFLLAAYDEESEELQAICKLGTGFSDEELEEYHQTLQARVLPTPRSYVRADGAVA
PDHWLEPSTVWEVRCADLSLSPIYPAARGLVDSEKGISLRFPRFVRVREDKTPEQATTSA
QVAWLYKRQSQIQNQEDTDQDSDPDLECFY
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaagcatcatgtcgtttttccaccccacgaaagagggcaaagcaaagaagccg
gaggagacacccagcagcgccagagaggccgagccccctccaaaggtggcgctgaaggag
cggaacagagtggtgcctgagagcgactctccggtgaagaggtcgggcaggaagacggcc
cgggtcctgtgcagcgaaggggaggaggaggaggacgatgaagccatcacgtcccccaaa
ggccagaagcctgcccccagctctccacaagtctcccctcccgctcctgtcacgtcccct
gagagcagcccttccctctccggcccctctccggcagcgaccatctccccgtcagggatc
ccgaagcggctcacagctcgaaagcagttttctaaacggaagattcaggatgtcctagaa
gagcacagcacggacaagggcccagaagccaagaggaagaaggtggaggaagaagcagag
accccaacagaaaacctcccacagccggaaggggccaaagagaagaaagcagaagagggg
gacctgcccatgacgccccccgagccccaaaacgcctgcaaagccgagccgccgacagaa
agcggctcagagccggtggtggcggtgaagcaggaaccccaggacgaggagccggccagg
ccgccccccagagctcccaagatgctcagcagtctcttcaccccccggaagccggcagtc
aaacaggaagtgaaagaagaggggcctggcaccccaagaaaggaggcgtccaagggactc
tcgcactcggatgtgagctccagccccctggacccatccagctacaaccctgccaagaaa
aactaccaccccgtccaggacgcgtgctggacgcggggccagaaggtcccttacctggct
gtggcccggacgtttgagaagatcgaggaggtttctgctcggctccggatggtggagacg
ctgagcaacttgcttcgctccgtggtggccctgtcgcccccagacctcctccccatcctc
tacctcagcctcaactgcctcgggcccccccagcagggcctggagctcggcgtcggggat
ggtgtccttctgaaggcggtggcccaggccacaggtcggcagctcgagttggtgcgggct
gaggccgccgagacgggcgacgtggggctggtggccgagaacagccgcagcacccagagg
ctcatgctgcccccgcccgccctcaccgcctctggggtcctcgccaaattccgagacatc
gcccggctcactggcagcgcttccacaaccaggaagatggacatcattaaaggcctcttt
gtggcctgccgccactcagaagcccgattcatcaccagagccctgagtggacggctgcgc
ctcgggctggcagagcagtcggtgctggccgccctcgcccaggccgtgagcctcacgcct
ccaggccaagaattccccccggccgtggtggatgctgggaagggcaagacagcagaggcc
agaaagacgtggctggaggagcaaggcatgatcctgaagcagacgttctgccaggtgcct
gacctggaccggatcgtcccggtgctgctggagcacggcctggaagggctcccggagcac
tgcaagctgagcccaggggtccccctgaaaccaatgttggcccaccccacccggggcgtc
agcgaggtcctgaagcgcttcgatgaggcagctttcacctgcgagtacaaatacgacggg
cagagggcacagatccattttctggaaggcggggaggtgaagatcttcagcaggaatcag
gaggacaataccggaaagtacccggacatcatcagccgcatccccaagattaaactcccg
tcagtcacatctttcatcctggacacagaagctgtggcttgggaccgggagaagaagcag
atacagccgttccaagtgctcaccacccgcaaacgcaaggaggtggatgcagcggagatc
caggtgcaggtgtgtttgtacgccttcgatctcatctacctcaatggagagtccctggtc
cgtgagcccctttcccgacgccggcagctgctccgggagaacttcgtggagacggagggc
gagtttgtcttcgccacctccctggacaccaaggacatggaccagatcgcggagttcttg
gagcagtcggtgaaagactcctgcgaggggctgatggtgaaaaccctggacgtcgacgcc
acctacgagatcgccaagagatcgcacaactggctcaagctgaagaaggactacctgcaa
ggcgtgggggacaccctggatctcgtggtgatcggcgcctacctgggccgggggaagcgg
gccggccgctacgggggcttcctgctggccgcctacgacgaggagagcgaggagctgcag
gccatctgcaagctgggaaccggcttcagcgacgaggagctggaggagtatcaccagacc
ctgcaggcccgggtgctgcccaccccccgctcctacgtccgggcagacggcgccgtggcc
ccggaccactggctggagcccagcaccgtgtgggaggtcaggtgcgcggacctctccctc
tcgcccatctaccccgctgcccgcggcctggtggacagtgagaaggggatctcccttcgc
ttcccgcggtttgttcgcgtccgtgaagacaagacgccggagcaggccaccaccagtgcc
caggtggcctggctgtacaagaggcagagtcagattcagaaccaggaggacacagaccaa
gactccgacccggacctggagtgtttctactag
DBGET
integrated database retrieval system
