Myotis myotis (greater mouse-eared bat): 118662648
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Entry
118662648 CDS
T07220
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
mmyo
Myotis myotis (greater mouse-eared bat)
Pathway
mmyo03013
Nucleocytoplasmic transport
mmyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118662648 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
118662648 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmyo03019
]
118662648 (THOC1)
03041 Spliceosome [BR:
mmyo03041
]
118662648 (THOC1)
Messenger RNA biogenesis [BR:
mmyo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
118662648 (THOC1)
Spliceosome [BR:
mmyo03041
]
Complex C
Other components
EJC/TREX
118662648 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118662648 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
118662648
NCBI-ProteinID:
XP_036177165
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHAEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRAIRKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSDTREYMPTLEEFFEEAIEQADPESMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDARRDKPVTGEQIEIFASKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRARQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgacgccgccgctcttcagtttacccgaagcgcggacgcggtttacgaagtct
accagagaagctctgaacaacaaaaatatcaagccattgttgaataccttcagccagtta
cctggaagtgaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctagaa
gaagaaattataaatcactcatcgtgtgaaaatgttttagctattatttctcttgctatt
gggggagtaactgaaggtatttgcaccgcatctacaccttttgtattgttgggagatgtt
ttggattgtctccccttggatcaatgtgacacaatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattctattctgctgggaaaaattatttactacgtatgtgc
aatgatctcttaagaagattatcaaaatcccagaacacagttttctgtggacgaattcaa
ctctttttggccaggcttttccctttatctgagaaatccggtcttaatttgcagagtcag
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcaccttgggtcag
aagcacgctgaagatagagaagaaggaatggatgtagaagaaggtgaaatgggtgatgat
gaagctccaacaacttgctccattccaattgattacaacctgtatcgaaaattctggtca
cttcaggattacttcaggaaccctgtgcaatgctatgagaagatttcatggaaaactttt
ctcaagtactcagaagaagttctggctgttttcaagagttataaattagatgatactcag
gcctcaagaaaaaagatggaagaattaaaaacaggaggagaacatgtatattttgcaaaa
tttttaacaagtgaaaagttgatggatttacaactgagtgacagtaactttcgccgacac
atcctactgcagtatctcattttattccaatatctcaagggacaggtgaaattcaaaagt
tcaaactatgttttaactgatgagcagtcactctggattgaagatactacaaaatcagtt
tatcaactgctatctgaaaacccacccgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacatcagatactaagccaacgagagcaatacgaaagagaacagcaccagag
gacttcctggggaaagggcccaacaaaaagattctgatgggaaatgaggagttaacaagg
ctttggaatctctgccctgataatatggaagcttgtaaatcagacacaagagaatatatg
ccaactttggaggaattctttgaagaagccattgaacaggcagacccggaaagcatggtt
gaaaatgaatataaggctgtgaacaattcaaattatggttggagagccctgagactgtta
gcacggagaagccctcacttcttccagccaaccaaccagcagttcaaaagtttgccagaa
tatcttgaaaacatggtaataaagctagcaaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagc
cctgatgctcgccgagacaaacctgtaacaggggaacaaatagagatatttgccagcaaa
ttgggtgaacaatggaagattctggctccctacttggaaatgaaagactcagaaattaga
cagattgagtgtgatagtgaagacatgaagatgagagctaggcagttactagttgcctgg
caagatcaagagggagtccatgcaacgcccgagaatctgattaatgcactgaataagtct
ggattaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag
DBGET
integrated database retrieval system
