Myotis myotis (greater mouse-eared bat): 118664571
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Entry
118664571 CDS
T07220
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
mmyo
Myotis myotis (greater mouse-eared bat)
Pathway
mmyo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mmyo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118664571 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mmyo03021
]
118664571 (PCF11)
03019 Messenger RNA biogenesis [BR:
mmyo03019
]
118664571 (PCF11)
Transcription machinery [BR:
mmyo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118664571 (PCF11)
Messenger RNA biogenesis [BR:
mmyo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
118664571 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
CFIA_Pcf11
SHOCT
Motif
Other DBs
NCBI-GeneID:
118664571
NCBI-ProteinID:
XP_036180712
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MSEPTPAEAGTAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV
TSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPGSAPSKLHVSQIPPMAVKAPHQIPLQPEKSRAGPSLQIQDLKGTNRDPRLN
RMSQHSSHGKDQSHRKEFLMNTLNQSDIKTSKTIPSEKLNSSKQEKSKSGEKITKKELDQ
LDSKSKSKSKSPSPLKNKFSHTKDLKNQESECPRVSDMSKRDPRLKKHLQDKTDSKDDDI
KEKRKTSEKKDKDEHMKSSEHRLVGSRNKIVNGIVQKQDVITEDSEKQGTKPGRSSTRKR
SRSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTAKAGKIRQSGCKQSHMEDFMPPSR
EERNAKRSTKQDVRDPRRIKKTEEERPQETTSQHSTKSGTEPKENVENWSSSKSNKRWKS
GWEENKSLQQGDDHSKSPHLRHRESWSSTKGILSPRAPKQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQDEFLVVVHQIRQLFQYQEGKHRCNVRDSPSEENKGGLKKKP
LLSDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASR
NSGAQFDRKEQFSERARRLSPISGSRSYAENLSPHEGRRRHDEQVSAKGVREEQRSPFND
RFPLKRPRYEDADKPFVDSPGSRFAGLDTNQRLTALAEDRPLFDGPNRPSVTRDGPTKMI
FEGPNKLSPRIDGPPAPGSLRFDGSPGQMGAGGPLRFEGPQGQLGGGCPLRFEGPPGPVG
TPLRFEGPIGQAGGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEVHRGQPVGGL
RFEGPHGQPVGGLRFDNPGGQPVRGHRFEGGHGPSGAAIRFDGPHGQPAGGIRFEGPLLQ
QGVGMRFEGPHGQSVTGLRFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFE
GPVPGGGLRIEGPLGQGGPRLEGCHAFRFDGQPGQPSLLPRFDGLHGQLGPRFERTGQPG
PQRFDGPPGQQVQLRFDGVPQRLDGPQHQQASRFDVPLGLQGARFDNHPSQRLESVSFNQ
TGPYNEPPGNAFNTPSQGLQFQRHEQIFDSPQGPNFNGPHGLGNQSFSNPLSRASGHSFD
EKNLQSSQFGNFGNLPAPITVGNIQASQQVLTGVAQPVPFGQGQQFLPVHPQNPGAFVQN
PSGALPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATTQVNEVAAQPPTEEEEDQN
EDQDVPDLTNFTIEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNR
TEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQ
SVPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDC
TPSPSKTPVENPLSIMLNIVKNELQEPCESPKVKEEQIDTPPACTEESIATPTEIKTEND
TVESV
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccgacgccggccgaggccggtaccgcgggggcccgggaggacgcctgtcgg
gattatcagtcatccctcgaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgttatgtaccttatggattctatc
gtgaaaaacgttggacgagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaaattacgttcc
acatgggatgagatattcccattgaagaaactttatgccctggatgtcagagtcaattca
ttagatcctgcttggcctattaaacctctaccccccaatgtgaatacatctagcatccat
gtgaatcctaaatttttaaataaatcgcctgaagagccttcaacacctggcacagtggtc
acttcccctagcatctccactcctccaattgttcctgatatacaaaagaatcttacccaa
gaacaactaataaggcagcagttacttgcaaaacaaaaacagttattagaacttcagcag
aaaaagctggagcttgaactagagcaagctaaagcacaactggcagtttctcttagtgtt
cagcaggagacatccaacttaggtcctggatctgcaccatccaaattacatgtttcacaa
attccccctatggcagttaaagctccccatcagattcctttgcaacctgaaaaaagccgt
gcaggtccatccttacaaattcaggacttgaaaggaacaaatcgggatccccgtcttaat
aggatgagtcagcattcttctcatggaaaagatcaaagtcacagaaaagaatttctaatg
aatacattaaaccaatctgatattaagacaagtaaaactataccttctgaaaaactaaat
tcatccaaacaagaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaccag
ttagattctaaatctaaatctaaatctaaatcaccatcacctttgaaaaacaaattctct
cacacaaaagacttgaaaaatcaagaatctgaatgcccaagggtgtctgacatgagtaag
agagatccaagattaaaaaaacatcttcaagataagactgatagcaaagatgatgatata
aaagagaagagaaaaacttcagaaaaaaaagataaagatgagcatatgaaatcatctgaa
catagactggttggaagtcgaaataaaatcgttaatggcattgtacaaaaacaagatgta
ataacggaagactcagaaaaacagggaacaaaaccggggagatcaagtactagaaagcga
tcaagatcgagatcacccaagtctcggtcaccaattatacattctcctaagagaagagat
aggcggtcacccaaacgaaggcaaaggagtatgtctccaacctcgacagccaaagctgga
aagattcgccaatctggatgtaagcagtcacatatggaagactttatgccaccttccagg
gaagaaagaaatgctaagagaagtactaaacaggatgttcgagatccaaggcgaataaaa
aagactgaagaggaacgaccgcaagaaactacaagtcagcattctacaaagtcaggcact
gaaccaaaggagaatgtagaaaattggtcaagttccaagtctaacaaaagatggaaatct
ggttgggaagaaaataaaagcttacaacaaggtgacgaccatagtaaatctcctcatcta
aggcatagggaaagctggtcaagcactaaaggaattttgtcacctcgagccccaaagcaa
cagcatcgattaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggat
gagttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtaaacat
agatgcaatgtacgcgatagtccttcagaagaaaataaaggtggattaaaaaagaaacct
ctcttatctgatgctgaattaacctactatgaacataaagcaaaactgaaaaggacacag
gttcagcattcatttccaagacttgatctcttagatcctgatatttttgactaccctttg
actgatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagtagg
aatagtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctttct
cctatatctgggagtcgttcttatgctgagaatctttcaccccatgagggccggagaaga
catgacgagcaagtctctgctaaaggtgtgcgagaagagcagaggtcaccattcaatgat
cgttttccacttaagcgacctagatatgaagatgcagataaaccatttgtagatagccca
ggatcacgattcgccggccttgatacaaatcagcgacttacagcgttagctgaagacaga
ccattatttgatggacctaataggccatcagtaacaagagatggcccaaccaagatgatt
tttgaaggacctaataaattaagccctagaattgatggacctcctgcaccaggttctctt
cgatttgatgggtcacctggacaaatgggggcaggtggtcctttgagatttgaaggacca
caaggtcagctaggaggcgggtgtcctttgagatttgaaggtcctccaggaccagtaggg
acacctctgcggtttgaagggccaattggtcaagcaggcggaggtggttttcggtttgaa
ggttcccctggtctgaggtttgagggatctgcaggtggtctacgatttgaagggccaggg
ggccagcctgtgggtgggctcaggtttgaggtacatcggggtcaacctgtgggaggtctg
aggtttgagggacctcatggtcagcctgtgggtggacttagatttgataatcccggaggt
cagcccgtacgtggacatagatttgaggggggtcatggtccatcaggagctgcaattagg
tttgatggacctcatggtcagccagcaggtgggatcagatttgagggccctttgctacag
cagggagttggaatgaggtttgagggcccccatggtcagtcagtaactggtctgaggttt
gaaggacaacataatcaacttggtggaaaccttaggtttgagggtccacatggtcagcca
ggggttgggatcaggtttgagggacccttagtccaacaaggaggtggaatgaggtttgag
ggtcctgttccaggaggtggactgagaattgaagggcctctgggtcaaggtggtccaaga
ttggaaggttgtcatgctttcaggtttgatgggcagccaggtcagccatcactcttacca
agatttgatggattacatggccaactaggtcctagatttgaaagaactggtcagccaggc
ccacagagatttgatggaccacctggacagcaggttcaactaagatttgatggtgttcct
caaaggcttgatggtccacaacaccagcaagcatcaaggtttgatgttccccttggtctt
caaggcgcacgatttgacaatcatccttcacaaaggcttgaatccgtttctttcaatcag
actggtccatataatgagccacctggcaatgcttttaataccccatcccaaggactgcaa
ttccaaagacacgaacaaatatttgattcacctcaaggacccaattttaatggaccacat
ggccttggaaaccagagtttctcaaatccccttagcagagcttctggacactcttttgat
gaaaagaatcttcaaagttctcaatttggaaactttggcaatttacctgctcccataaca
gtaggaaacattcaggcatctcaacaggttctgactggtgttgctcaaccagtaccattt
ggccagggacaacaatttttaccagttcatccacaaaatcctggagcatttgttcagaat
ccttcaggagcccttcctaaggcatatcctgataatcacctcagtcaggtggatgtaaat
gaattattttcaaaactgctaaaaacaggaattctcaaattgtcccagcctgattcagct
acaacacaagtaaatgaagttgctgctcagcctcccactgaagaggaggaagatcaaaat
gaagatcaagatgttccagatcttaccaattttacaattgaagagttaaaacaacgttat
gatagtgttataaatcgactgtacactggtattcagtgttactcttgtggaatgaggttt
acaacatcacagacagatgtttatgcagatcacttggactggcattatcggcaaaataga
actgaaaaagacgttagcagaaaagtcactcatagacgttggtactacagtttaacagac
tggatagaatttgaggaaatagccgatttggaagaacgtgcaaagagccagttttttgaa
aaggtgcatgaagaagttgtgctcaaaactcaggaagctgctaaagaaaaggagttccaa
agtgtaccggcagggccagctggagcagtggagagttgtgaaatctgtcaagaacaattt
gaacaatactgggatgaagaagaggaggagtggcatttaaagaatgccattagagtggat
ggaaagatttatcatccatcatgttatgaagattatcaaaatacatcttcatttgattgt
acaccatctcccagcaagacaccagttgaaaaccctttgagcattatgttgaacattgtc
aaaaatgaattgcaggaaccctgtgaaagtcccaaagttaaggaagaacaaattgatacc
ccaccagcttgtacagaggagagcatagcaacacccactgaaattaaaactgaaaatgac
acagttgagtcagtttaa
DBGET
integrated database retrieval system
