Miniopterus natalensis (Natal long-fingered bat): 107529134
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Entry
107529134 CDS
T05883
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mna04121
]
107529134 (PDZRN3)
Enzymes [BR:
mna01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107529134 (PDZRN3)
Ubiquitin system [BR:
mna04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
107529134 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
Sina_ZnF
zf-C3HC4_4
zf-RING_5
Prok-RING_4
Tricorn_PDZ
zf-TRAF
TRAF3_RING
zf-RING_10
zf-rbx1
zf-RING_6
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
107529134
NCBI-ProteinID:
XP_016057925
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MGFELDRFDGEVDPDLKCALCRKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCGRVVKLQELPEHLERCDFAPARCRHAGCVAA
PAAGKGEETKSLTLVLHRDAGSLGFNIIGGRPCADNQDGSSSEGIFVSRIVDSGPAAKDG
GLQIHDRIVEVNGKDLSRATHDQAVEAFRTAKEPIVVQVLRRTPRTKAFPAAPESPLVDT
GTQTDITFEHIMALSKMPPPAPPALEPYLLPEEHPSAHEYYDPSDYLGGVHQDMDREELE
LEEVDLYRANSQDKLGLTVCYRTDDEDDLGIYISEIDPNSIAAKDGRIQEGDRIIQINGI
EVRNREEAVALLTSEENKNFSLLIARPELQLDESWMDDDRNDFLDDLHMDMLEEQHHQAM
QFTARVLQQKQHEEDEGTTDTATVLSNQHEKDSGVGRTDDSTRNDESSEQEHTGEEAPAP
APRAGRSPAGEPGLRDAELLELRCPAGGAPEGVDRELELLNAELRSIELECLSVVRAHRA
RQLREAWTLHPSGFRGCDTDPDGHRHELSDITELPEKSDKDSSSAYNTGESCRSTPLALD
VSPDSSLRRGAEGTAGACGPSPESPLCITEDTDLAHIPAHARRYRSYMQLVQQKSAVEYA
HSQVSLLGACKDLGPAGPPEPRAEWKVKVRSDGSRYITKRPVRDRLLRERALRIREERSG
LTTDDDAASDMKLGRYWSREERKQHVARAREQRRRRALLLQSRLDGPREQPAEDDRREVS
ILELSHKKMMKKRNKKILDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgaggtggaccccgacctgaagtgcgccctg
tgccgtaaggtgctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgcgtcctgccctgggtggtgcaggagggcagctgccccgcgcgctgccgcggccgcctg
tcggccaaggagctcaaccacgtgctgccgctcaagcgcctcatcctgaagctggacatc
aagtgcgcgcacgcggcccggggctgcggccgggtggtcaagctgcaggagctgcccgag
cacctggagcgctgcgacttcgcgcccgcgcgctgccgccacgcgggctgcgtggccgcg
ccggctgcgggcaagggcgaagagaccaaaagcctgaccctggtcctgcaccgtgatgct
ggctctcttggcttcaacatcatcggtggccggccatgtgcggacaaccaggacggctcg
tccagtgaaggaatctttgtatccagaatagtggacagcgggcccgcagccaaggacgga
ggcctgcagattcacgaccggatcgtggaggtcaacggcaaagacttatccagagcgacg
catgaccaggctgtggaggctttcagaacggccaaggagcccattgtggtccaggtgctg
cgaaggacgccgcggaccaaagcgttcccggccgcacccgagtcgccgctggtggacacg
ggcacccagactgacatcaccttcgagcacatcatggctctctccaagatgccccccccg
gcaccgcccgcgctggagccgtacctcttgccggaggagcatccctcggcccacgagtac
tatgaccccagcgactacctgggaggggtccatcaggacatggacagggaggagctggag
ctggaggaggtggacctgtaccgagcaaacagccaggacaagctgggcctcaccgtgtgc
taccggacagacgatgaggatgaccttgggatttacataagtgagattgaccccaacagc
atcgcggccaaggacgggcgcatccaggaaggcgaccgcatcatccagattaatgggata
gaggtacggaaccgcgaagaggctgtggctctcctaaccagtgaggaaaacaagaacttt
tccttgctcatcgcaaggcctgagctccagctggacgagagctggatggacgacgacagg
aacgacttcctcgacgacctgcacatggacatgctggaggagcagcaccaccaggccatg
cagttcacggcccgcgtgctgcagcagaagcagcatgaggaagacgaggggaccacggac
acggccaccgtcctgtccaaccagcacgagaaggacagcggggtgggccgcaccgacgac
agcacccgcaacgacgagagctcggagcaggagcacaccggggaggaggcccccgcgccg
gccccccgcgccgggcggagcccagccggggagccggggctgcgggatgccgagctgctg
gagctcaggtgcccggcggggggcgccccggagggcgtggaccgggagctggagctgctc
aacgctgagttgcgcagcatcgagctcgagtgcctgagtgtcgtgcgagcccaccgggcg
cggcagctgcgggaggcctggacgctgcaccccagcggcttccgtggctgcgacacggac
ccggacggccaccggcacgagctctcggacatcaccgagctccccgagaagtcagacaag
gacagctccagcgcctacaacaccggggagagctgccggagcacccccctcgccctggac
gtgtccccggacagctcactgaggaggggggccgaggggaccgcgggggcctgcgggccg
tctcccgagagcccgctgtgcatcaccgaggacaccgacctggcgcacatcccagcacac
gcacggcgctaccgcagctacatgcagctggtgcagcagaagtccgccgtggagtacgcg
cacagccaggtgagcctgcttggcgcgtgcaaggacctcggccccgcgggcccgcctgag
ccccgcgccgagtggaaggtgaaggtgcgcagcgacggctcccgctacatcaccaagcgg
cccgtgcgcgaccgcctgctgagggagcgcgccctgcggattcgggaggagcgcagcggc
ctcaccaccgacgacgacgcggccagtgacatgaagctgggccgctactggagccgggag
gagcgcaagcagcacgtggcgcgcgccagggagcagcggcggaggcgcgcgctcctgctg
cagagccggctggacggcccccgggagcagcccgccgaagacgaccggagagaggtgagc
atcctggagctgagccacaagaagatgatgaagaagcggaacaaaaagatactggataac
tggatgaccatccaggaactgctgacccacggcaccaagtccccggacggcactagagtg
tataattccttcctctcggtaactactgtatga
DBGET
integrated database retrieval system
