Macaca nemestrina (pig-tailed macaque): 105478624 Help Entry 105478624         CDS       T08765                                  Symbol LIG1 Name (RefSeq) DNA ligase 1 isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism mni  Macaca nemestrina (pig-tailed macaque) Pathway mni03030   DNA replication mni03410   Base excision repair mni03420   Nucleotide excision repair mni03430   Mismatch repair Brite KEGG Orthology (KO) [BR:mni00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     105478624 (LIG1)    03410 Base excision repair     105478624 (LIG1)    03420 Nucleotide excision repair     105478624 (LIG1)    03430 Mismatch repair     105478624 (LIG1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:mni03032]     105478624 (LIG1)    03400 DNA repair and recombination proteins [BR:mni03400]     105478624 (LIG1) Enzymes [BR:mni01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      105478624 (LIG1)     6.5.1.6  DNA ligase (ATP or NAD+)      105478624 (LIG1)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      105478624 (LIG1) DNA replication proteins [BR:mni03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     105478624 (LIG1)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      105478624 (LIG1) DNA repair and recombination proteins [BR:mni03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      105478624 (LIG1)    NER (nucleotide excision repair)     Other NER factors      105478624 (LIG1)    MMR (mismatch excision repair)     Other MMR factors      105478624 (LIG1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C PucR DUF1685 DDR Presenilin Motif Other DBs NCBI-GeneID:  105478624 NCBI-ProteinID:  XP_011734421 Ensembl:  ENSMNEG00000030772 UniProt:  A0A2K6BPP2 LinkDB All DBs Position Unknown AA seq 919 aa AA seqDB search MQRSIMSFFHPKKEGKAKKPEKEASNGSRETEPPPKAALKEWNGVVSESDSPVKRPGRKA ARVLGSEGEEEDEALSPAKGQKPAPDCSQVSPPRPATSPENNASLSDTSPMDSSPSGIPK RRTARKQLPKRTIQEVLEEQSADEDREAKRKKEEEEVETPEESLTEAEVATEKEGEDRDQ PTTPPKPLKTSEAETLTESVSEPEVATRQELQEEEEQTKPPRSAPKTLSSFFTPRKPAIK KEVKEEEPGAPGKEGAAEGPLDPSGYNPAKNNYHPVEDACWKPGQKVPYLAVARTFEKIE EVSARLRMVETLSNLLRSVVALSPPDLLPVLYLSLNHLGPPQQGLELGVGDGVLLKAVAQ ATGRQLESVRAEAAEKGDVGLVAENSRSTQRLMLPPPPLTASGVFSKFRDIARLTGSAST AKKIDIIKGLFVACRHSEARFIARSLSGRLRLGLAEQSVLAALSQAVSLTPPGQEFPPAV VDAGKGKTAEARKTWLEEQGMILKQTFCEVPDLDRIIPVLLEHGLERLPEHCKLSPGIPL KPMLAHPTRGVSEVLKRFEEAAFTCEYKYDGQRAQIHALEGGEVKIFSRNQEDNTGKYPD IISRIPKIKLPSVTSFILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAF DVIYLNGESLVREPLSRRRQLLRENFVETEGEFVFATSLDTKDVEQIAEFLEQSVKDSCE GLMVKTLDVDATYEIAKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLL ASYDEDSEELQAICKLGTGFSDEELEEHHQSLKALVLPSPRPYVRIDGAVTPDHWLDPSA VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ SQIQNQQGEDSGSDPEDTY NT seq 2760 nt NT seq  +upstreamnt  +downstreamnt atgcagcgaagtatcatgtcattcttccaccccaagaaagagggtaaagcgaagaagcct gagaaggaggcatccaacggcagcagagagacggagccccctccgaaggcggcactgaag gagtggaatggagtggtgtccgagagtgactctccagtgaagaggccaggcaggaaggcg gcccgggtcctgggcagcgaaggggaagaggaggatgaagcccttagccctgctaaaggc cagaagcctgccccggactgctcacaggtctccccgccccgtcctgccacatctcctgaa aacaacgcttccctctctgacacctctcccatggacagctccccatcagggatcccgaag cgtcgcacagctcggaagcagctcccgaaacggaccattcaggaagtcctggaagagcag agtgcggacgaggacagagaagccaaaaggaagaaggaggaggaagaagtggagacccca gaagaaagcctcacagaggctgaagtggcaacagagaaggaaggagaagacagggaccag cccaccacacctcccaagcccctaaagacctccgaagcagagaccctgacggaaagcgtt tcggagcccgaggtggccacgaggcaggaactgcaggaggaggaagagcagaccaagcct ccccgcagcgctcccaagacgctcagcagcttcttcacaccccggaagccagcaatcaaa aaagaagtgaaggaggaggagccaggggctccaggaaaggagggagctgctgagggaccc ctggacccatccggttacaatcctgccaagaacaactaccatcccgtggaagacgcctgc tggaaaccgggccagaaggtcccttacctggccgtggcccggacgtttgagaagatcgag gaggtgtctgcccggctccggatggtggagacactgagcaacttgctgcgctccgtggtg gccctgtcgcctccagacctcctcccggtcctctacctcagcctcaaccaccttgggcca ccgcagcagggcctggagcttggcgtgggtgatggcgtccttctcaaggcagtggcccag gccacaggtcggcagctggagtccgtccgggctgaggcagccgagaagggcgacgtgggg ctggtggccgagaacagccgcagcacccagaggctcatgctgccaccacctccgctcact gcttccggggtcttcagcaagttccgtgacatcgccaggctcactggcagtgcttccaca gccaagaagatagacatcatcaaaggcctctttgtggcctgccgccactcagaagcccgg ttcatcgccaggtccctgagcggacggctgcgccttgggctggcagagcagtcggtgctg gccgccctctcccaggctgtgagcctcacgcccccaggccaagaattcccaccagccgtg gtagatgctgggaagggcaagacagcagaggccagaaagacgtggctggaggagcaaggc atgatcctgaagcagacattctgcgaggtgcccgatctggaccgaattatccccgtgctg ctggagcacggcctggaacgtctcccggagcactgcaagctgagcccagggattcccctg aaaccaatgttggcccatcccacgcggggcgtcagtgaggtcctgaaacgctttgaggag gcagctttcacctgcgaatacaaatacgatgggcagagggcacagatccacgccctggaa ggcggggaggtgaagatcttcagcaggaatcaggaagacaacactggaaagtacccggac atcatcagccgcatccccaagattaaactcccatcagtcacatccttcatcctggacact gaagccgtggcttgggaccgggaaaagaagcagatccagccattccaagtgctcaccacc cgcaaacgcaaggaagtggatgcgtccgagatccaggtgcaggtgtgtttgtacgccttc gacgtcatctacctcaatggagagtccctggtacgtgagcccctttcccggcgccggcag ctgctccgggagaactttgtggagacggagggcgagtttgtcttcgccacctctctggac accaaggacgtcgagcagatcgccgagttcctggagcagtcggtgaaagactcctgcgag gggctgatggtgaagaccctggatgtcgatgccacctacgagatcgccaagagatcgcac aactggctcaagctgaagaaggactaccttgatggcgtgggtgacaccctggacctggtg gtgatcggcgcctacctgggccgggggaagcgggccggccggtacgggggcttcctgctg gcctcctacgacgaggacagtgaggagctgcaggccatatgcaagcttggaactggcttc agcgacgaggagctggaggagcatcaccagagcctcaaggccctggtgctgcccagcccc cgcccttatgtgcggatagatggtgccgtgactcccgaccactggctggaccccagcgcc gtgtgggaggtgaagtgtgccgacctctccctctcccccatctaccctgctgcgcggggc ctggtggatagtgacaaggggatctcccttcgcttccctcggtttattcgagtccgtgaa gacaagcagccggagcaggccaccaccagtgcacaggtggcctgtttgtaccggaagcaa agtcagattcagaaccaacaaggcgaggactcaggctctgaccctgaagatacctactaa

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