Moraxella nonliquefaciens: I6G26_07855
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Entry
I6G26_07855 CDS
T07003
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
mnn
Moraxella nonliquefaciens
Pathway
mnn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mnn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I6G26_07855 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnn03021
]
I6G26_07855 (rpoD)
Transcription machinery [BR:
mnn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6G26_07855 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HeLo
GerE
Motif
Other DBs
NCBI-ProteinID:
QPT43984
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Position
1560850..1562703
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AA seq
617 aa
AA seq
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MSEHSTSQLAALIQLGKEQGYLTYAEINDQLPESVTESDQVEDIIAMLTDVGIAIYDVAP
DEDDIILANSGSDDDMAADEAAAVLASVETEPGRTTDPVRMYMREMGTVDLLSRDGEISI
AKRIEEGTREVQYIMAYWPGTVKFVLDEYAQVQTGEKKISDVVTGFLSLDDGDIEILEND
IEINLTISESDDDDDDEENDDGSINIDNDNDDSGLDPEEVKARFDEIQNLFDNAKKMLEK
HGRSSEEAKAAYDELATRFMLIKLNNRLSDQIMALMRQAYEDVRTTERQIMRLVIRKGKM
PLDEFKKTFPSNETNIDWLAHRIDGKPAFADTLKAVMPDVVALQKRILAHEENLQMNIRD
MKAVARQMAIGEAKARRAKKDMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVD
KFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKINRVSRQLLQEMGRE
PTPEELGERLDMDEAKVRKVLKIAKEPISMETPIGDDEDSHLGDFIEDSTISSPVENATA
EGLREATREVLDNLTEREAKVLKMRFGIDMASDHTLEEVGKQFDVTRERIRQIEAKALRK
LRHPSRSEHLRSFLEND
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacattccacttcccaattagccgcccttattcagcttggcaaagagcaaggc
tatctgacctatgctgagattaatgaccagttgcctgagtccgttaccgaaagcgaccag
gtagaggacatcatcgccatgctaacggacgttggcatcgccatttatgacgtcgcccct
gatgaagatgacattattttagcaaactcaggcagtgatgatgacatggcagccgatgaa
gcagcggcggttcttgccagtgttgagacagaacctggacgtaccaccgaccctgtgcgt
atgtacatgcgtgagatggggacggtagatttgctctctcgtgatggtgagattagcatt
gccaaacgcatagaagagggcactcgtgaagttcaatatatcatggcgtactggccaggt
acggttaaatttgtcctagatgaatatgcacaggtacaaacaggtgagaaaaaaatctct
gatgtggttacaggctttttatcactggatgatggcgatattgaaatcttagaaaatgac
atagaaattaacttaacaatcagcgaatccgatgatgacgatgatgatgaagaaaatgat
gacggtagcataaacatagataatgacaacgatgacagcggtcttgacccagaagaggtc
aaagctcgctttgatgaaatccaaaacctatttgacaacgccaaaaagatgcttgaaaaa
catgggcgtagcagtgaagaggccaaagccgcttatgatgaacttgccactcggttcatg
ctcatcaaactcaataaccgtctgtccgaccaaatcatggcactcatgcgtcaggcctat
gaagatgtacgtactaccgaacgccaaatcatgcgattggtcatccgcaagggcaaaatg
ccccttgatgaattcaaaaaaaccttccccagcaatgagacgaacattgactggcttgcc
catcgcattgatggtaagcctgcttttgcagataccttaaaggcagtcatgcccgatgtt
gtggcactacaaaaaagaatcctagctcacgaagaaaacctacaaatgaatattcgtgac
atgaaagcggtggctcgtcaaatggcaatcggagaagccaaagctcgtcgtgccaaaaaa
gacatggttgaggccaacttacgtctggtcatctccatcgccaaaaaatacaccaaccgt
ggcttacaatttcttgacctcatccaagagggcaatattggtctgatgaaagcggtagac
aaatttgaatatcgtcgtggttataaattctcaacttatgccacatggtggattcgtcaa
gccatcacccgctctatcgctgaccaagctcgtaccattcgcatccctgtgcatatgatt
gagacaattaacaaaatcaaccgagtgtctcgccaactgcttcaagagatgggacgtgaa
ccgaccccagaggagttgggtgaacgtttggatatggatgaggccaaggtgcgtaaggtc
ttaaaaatcgccaaagaaccaatctccatggaaacacccattggtgatgatgaagacagt
cacctaggcgacttcatcgaagacagtaccatttcaagtcctgttgagaatgccactgcc
gagggcttgcgtgaggcaacccgagaggtactagataacttgaccgaacgtgaggccaaa
gtgctaaaaatgcggtttggtattgacatggcctctgaccacaccttagaagaggtaggt
aagcaatttgatgtcactcgtgaacgtattcgccaaattgaggccaaagctctgcgtaaa
ttacgccacccatctcgctctgaacatttacgttcgtttttggaaaatgactga
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