Mustela nigripes (black-footed ferret): 132002003
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Entry
132002003 CDS
T09425
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03082
ATP-dependent chromatin remodeling
mnp03083
Polycomb repressive complex
mnp04110
Cell cycle
mnp04213
Longevity regulating pathway - multiple species
mnp04330
Notch signaling pathway
mnp04350
TGF-beta signaling pathway
mnp04613
Neutrophil extracellular trap formation
mnp04919
Thyroid hormone signaling pathway
mnp05016
Huntington disease
mnp05031
Amphetamine addiction
mnp05034
Alcoholism
mnp05165
Human papillomavirus infection
mnp05169
Epstein-Barr virus infection
mnp05200
Pathways in cancer
mnp05202
Transcriptional misregulation in cancer
mnp05203
Viral carcinogenesis
mnp05206
MicroRNAs in cancer
mnp05220
Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132002003 (HDAC1)
03083 Polycomb repressive complex
132002003 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
132002003 (HDAC1)
04350 TGF-beta signaling pathway
132002003 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
132002003 (HDAC1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
132002003 (HDAC1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
132002003 (HDAC1)
09149 Aging
04213 Longevity regulating pathway - multiple species
132002003 (HDAC1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
132002003 (HDAC1)
05202 Transcriptional misregulation in cancer
132002003 (HDAC1)
05206 MicroRNAs in cancer
132002003 (HDAC1)
05203 Viral carcinogenesis
132002003 (HDAC1)
09162 Cancer: specific types
05220 Chronic myeloid leukemia
132002003 (HDAC1)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
132002003 (HDAC1)
05165 Human papillomavirus infection
132002003 (HDAC1)
09164 Neurodegenerative disease
05016 Huntington disease
132002003 (HDAC1)
09165 Substance dependence
05031 Amphetamine addiction
132002003 (HDAC1)
05034 Alcoholism
132002003 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mnp03036
]
132002003 (HDAC1)
Enzymes [BR:
mnp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
132002003 (HDAC1)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
132002003 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
132002003 (HDAC1)
BRAF-HDAC complex
132002003 (HDAC1)
REST complex
132002003 (HDAC1)
SHIP complex
132002003 (HDAC1)
MiDAC complex
132002003 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
132002003 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
132002003 (HDAC1)
Chromatin remodeling factors
NuRD complex
132002003 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
132002003
NCBI-ProteinID:
XP_059233022
LinkDB
All DBs
Position
14:23949722..23977030
Genome browser
AA seq
453 aa
AA seq
DB search
MKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYHSDDYIKFLRSIRPDNMSEYSK
QMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNKQQTDIAVNWAGGLHHAKKSEASG
FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTG
DLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVISKVMEMFQPSAVVLQCGSDSLSGD
RLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELP
YNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQVIPEDAI
PEESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGEGGRKNSSNFKKAKRVKTEDEK
EKDPEEKKEVIEEEKTKEEKQEAKGVKEEVKLA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctcaccgaatccgtatgactcacaatttgctacttaactatggtctctaccga
aaaatggaaatctatcgccctcacaaagccaatgctgaggagatgaccaagtaccacagt
gacgactacattaaattcttgcgctccatccgcccagataacatgtccgagtacagcaag
cagatgcagagattcaacgtcggtgaggactgtccggtattcgatggcctgtttgagttc
tgtcagttatctactggtggctctgtggcgagtgctgtgaaacttaataagcaacagacg
gacatcgctgtgaattgggccgggggcctgcaccatgcaaagaagtctgaggcatctggc
ttctgttacgtcaatgatatcgtcttggccatcctggaactgctaaagtatcaccagagg
gtgctgtatattgacattgatattcaccacggcgatggcgtggaagaggccttctatacc
acagaccgggtcatgactgtgtcctttcataaatacggagagtacttcccaggaactggg
gacctacgggatattggggctggcaaaggcaagtattatgctgttaactacccgctccga
gatgggatcgatgacgagtcctatgaggccattttcaagccggtcatatctaaagtgatg
gagatgttccagcccagtgcggttgtcttacagtgtggttccgactccctgtctggggat
cggttaggttgcttcaatctgaccatcaaagggcacgccaagtgtgtggagtttgtgaag
agcttcaacctgcctatgctgatgctgggaggaggcggctacaccatccgtaacgtggcc
cgctgctggacgtatgaaacagcagtggccctggacacggagatcccaaatgagcttccg
tacaacgactacttcgaatactttggaccagatttcaaacttcacatcagtccttccaat
atgaccaaccagaataccaatgaatacctggagaagatcaaacagcgactgtttgagaac
ctgagaatgctgccccatgcaccgggggtccaaatgcaggtgattcctgaggacgccatt
cctgaggagagtggcgacgaggatgaagaagatcctgataagcgcatctcaatctgttct
tctgacaaacgaattgcctgcgaggaagagttctcggactctgatgaggagggagaaggc
ggtcgcaagaactcttccaacttcaaaaaagccaagagagtcaaaactgaggatgaaaaa
gagaaagacccagaagagaagaaagaagtcatagaagaggagaaaaccaaggaggagaag
caagaagccaaaggggtcaaggaggaggtcaagttggcctga
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