Mustela nigripes (black-footed ferret): 132006898
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Entry
132006898 CDS
T09425
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03013
Nucleocytoplasmic transport
mnp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132006898 (UPF3B)
03015 mRNA surveillance pathway
132006898 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132006898 (UPF3B)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
132006898 (UPF3B)
mRNA cycle factors
P-body specific factors
132006898 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
132006898
NCBI-ProteinID:
XP_059240994
LinkDB
All DBs
Position
X:29763484..29780301
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AA seq
483 aa
AA seq
DB search
MKEEKEHRPKEKRVTLLTPPGATGSGGGASGDTTKGEDKQDRNKEKKEALSKVVIRRLPP
TLTKEQLQEHLQPMPEHDYFEFFSNDTSLYPHMYARAYINFKNQEDIILFRDRFDGYVFL
DNKGQEYPAIVEFAPFQKAAKKKTKKRDTKVGTIDDDPEYRKFLESYAADNEKMTSTPET
LLEEIEAKNRELIAKKTTPLLSFLKNKQRMREEKREERRRREIERKRQREEERRKWKEEE
KRKRKDIEKLKKIDRVPERDKLKDEPKIKVHRFLLQAVNQKNLLKKPEKGDEKELDKREK
AKKLDKENLNDERASGQSCTLPKRSDGEPKDEKPKRPEEESVRDYRERERDYERDQERIL
RERERLKRQEEERRRQKERYEKEKAFKRKEEELKKEKEALRDKGKKTESTESVSSSEKTE
KKEEVVKRDRIRNKDRPAMQLYQPGARSRNRLCPPDDSTKSGDSAVEKKQESGISHRKEG
GEE
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggagaaggagcataggcctaaagagaagcgagtaaccctgttgactccccca
ggggccacaggcagtggcggtggggcttcgggcgacaccaccaaaggggaagataagcag
gatcgaaataaggagaagaaagaggcgctgagcaaggtggtaattcggagattacctccc
actttgaccaaggagcaacttcaagaacatcttcagcctatgccggagcatgattatttt
gaatttttttctaatgatactagtctgtatcctcatatgtacgccagagcatacatcaac
tttaaaaaccaagaggacattattttgttcagggatcgctttgatggttatgtattcctt
gacaataaaggtcaggaatatcctgctatagtagaatttgcaccttttcaaaaagctgca
aaaaagaagactaagaaaagagataccaaagtcgggactatcgatgatgatccagaatat
agaaaatttttggaaagctatgctgcagataatgagaaaatgacatctactccagagaca
ctgctagaggaaatagaagcaaaaaatagagaattaatagctaaaaagacaaccccactt
ttgagcttcctgaaaaacaagcagagaatgagagaagaaaaaagagaggaaagaaggagg
cgagaaatagaaaggaaaagacaaagggaagaagagaggaggaaatggaaagaagaagaa
aaacgaaaaaggaaagacatagaaaagctgaagaagatagacagagttccagaaagggac
aaattaaaggatgaaccaaagattaaggtacacaggtttctgttacaagctgtgaatcag
aaaaatctactcaagaagccagaaaaaggagatgaaaaagaattagataaaagagaaaaa
gccaagaaactggacaaagagaatctgaatgatgaaagagccagtgggcagagttgtaca
ctgcccaagcgctctgatggtgaacctaaagatgaaaagcctaagaggcccgaagaggag
agtgtccgagactaccgggagcgggagcgggactatgagcgcgaccaagagcgcatcctg
cgggagagggagaggctgaagcggcaggaagaggagcgccgcaggcagaaggagcgctat
gagaaggagaaggcttttaaaagaaaggaagaagaattgaaaaaagagaaagaagccctt
cgggataaaggaaagaagactgaaagcacagaatcagtaagcagctcagaaaaaactgaa
aagaaagaggaagtggttaagagagatcgcataagaaacaaggatcgcccagcaatgcag
ctttaccaaccaggagctcgaagccgaaatcgactctgtccacctgatgacagcaccaag
tctggagattcagcagtagaaaaaaagcaggaaagtggtattagccatagaaaagaagga
ggagaggagtga
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