Mustela nigripes (black-footed ferret): 132012410
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Entry
132012410 CDS
T09425
Symbol
DSCAM
Name
(RefSeq) cell adhesion molecule DSCAM isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mnp04515
]
132012410 (DSCAM)
Cell adhesion molecules [BR:
mnp04515
]
Immunoglobulin superfamily
DSCAM family
132012410 (DSCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
Pur_ac_phosph_N
Ig_5
C2-set_2
Sp38
C1-set
V-set_CD47
Interfer-bind
fn3_2
ChitinaseA_N
Adeno_E3_CR1
DUF6377
DUF4381
Motif
Other DBs
NCBI-GeneID:
132012410
NCBI-ProteinID:
XP_059248358
LinkDB
All DBs
Position
2:complement(214124628..214875186)
Genome browser
AA seq
2015 aa
AA seq
DB search
MWILALSLFQSFANVFSEDLHSSLYFVNASLQEVVFASTTGTLVPCPAAGVPPVSLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYVTVVSWEKDTVSLISGRRGSRFLITS
TGALYIKDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANAAPSILDGFDHRKAM
AGQRVELPCKALGHPEPDYRWLKDNMPLELSGRFQKTVTGLLIENTRPSDSGSYVCEVSN
RYGTAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGSEDQELSWYRNGEILNPG
KNVRITGINHENLIMDHMVKSDGGAYQCFVRKDKLSAQDFVQVVLEDGTPKIISAFSEKV
VSPSEPVSLMCNVKGTPLPTITWTLDDDPILKGGSHRISQMITSEGNVVSYLNISSSQVR
DGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKW
YKNSNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPP
FIQPFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRIS
NLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVVLNCSAEGYP
VPTIVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSNDVGADVS
KSMYLTVKIPAMITSYPNTTLATQGQKKEMSCAAHGEKPIIVRWEKEDRIINPEMARYLV
STKEVGEEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIKDVK
ARTITLRWTMGFDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPSSTYS
IRMYAKNRIGKSEPSNELSITADEAAPDGPPQEVHLEPLSSQSIRVTWKAPKKHLQNGII
RGYQIGYREYSTGGNFQFNIISIDTTGDSEIYTLDNLSKFTQYGLVVQACNRAGTGPSSQ
EIITTTLEDVPSYPPENVQAIATSPESISISWSTLSKEALNGILQGFRVIYWANLMDGEL
GEIKNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKA
AAASASMVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQY
SVWVVAVTSAGRGNSSEIIMVEPLAKAPARILTFSGTVTTPWMKDIALPCKAVGDPSPAV
KWMKDSNGTPSLVTIDGRRSVFSNGSFVIRTVKAEDSGYYSCIANNNWGSDEIILNLQVQ
VPPDQPRLTVSKTTSSSITLSWLPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYR
LENLKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLI
GWNDGGCPITSFTLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCA
EKQANFATLNYDGSTIPPLIKSVVQSEEGLTTNEGLKMLVTISCILVGVLLLFVLLLVVR
RRRREQRLKRLRDAKSLAEMLMSKNTRTSDTLSKQQQTLRMHIDIPRAQLLIEERDTMET
IDDRSTVLLTDADFGEAAKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRNAK
AGPTARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRAAGSMDKESDSYSVSPSQDTDRA
RSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNEYTDS
LTSSTPSESGICRFTASPPKPQDGGRVMNMAVPKAHRPGDLIHLPPYLRMDFLLNRSGAG
TSRDLSLGQACLEPQKSRTLKRPTVLEPIPMEASSSTSSTREGQQWQQGAVATLPQREGA
ELGQAAKMSSSQESLLDSRGHLKGNNPYAKSYTLV
NT seq
6048 nt
NT seq
+upstream
nt +downstream
nt
atgtggatactggctctctccttgttccagagcttcgcgaatgttttcagtgaggacctt
cactccagcctctactttgtcaatgcatctctgcaagaggtagtgtttgcgagcaccacg
gggaccctggtgccctgccccgctgcaggcgtccctcctgtgtctctcagatggtaccta
gcgacgggcgaggagatctacgatgtccccgggatccgccacgtccaccccaacggcact
ctccaaatttttcccttccctccttcaagctttagtaccttaatccatgataatacttat
tattgcacagctgaaaatccttcagggaaaattagaagtcaggatgtccacatcaaggct
gttttacgggagccctatacagtccgtgtggaggaccagaaaaccatgagaggcaatgtt
gcggtcttcaagtgcattatcccctcctcagtggaggcgtacgtcaccgtcgtctcctgg
gagaaagacaccgtgtcactcatctcaggtaggcgaggatctagatttctcatcacatcc
acgggagccttgtatattaaagatgtacagaatgaagatggattatataactaccgctgt
atcacgcggcatagatacacgggggagacccggcagagtaacagcgctcgactctttgta
tcagacccagcgaacgcagccccatccatactggatgggtttgatcatcgcaaagccatg
gcagggcagcgtgtggagttgccttgcaaagcgcttgggcatcctgagccagattatcgc
tggctgaaggacaacatgcctctggaactttctggaaggttccagaagactgtgacaggg
ctgctcattgagaacactcgtccttcagactcaggcagctatgtgtgtgaagtttccaac
agatacggcactgctaaggtgataggccgcctgtacgtgaaacagccactgaaagctacc
atcagccccaggaaagttaaaagcagcgtgggtagccaggtttccttgtcctgcagcgtg
acaggcagtgaggaccaggaactctcctggtaccgaaacggtgaaatcctcaaccctgga
aaaaatgtgaggatcacagggatcaaccacgaaaaccttataatggatcacatggtcaaa
agtgacgggggcgcgtaccagtgctttgtgcgcaaggataagctgtccgctcaagacttt
gtgcaggtggtccttgaagatggcactcccaaaattatttctgcctttagtgaaaaagtg
gtgagcccatcagaacccgtgtccctcatgtgcaacgtcaagggcacacccttgcccacc
atcacgtggaccttggatgatgacccaatcctcaaggggggcagccaccgcatcagccag
atgatcacgtcggagggaaacgtggtcagctacctgaacatctccagctctcaggtccgg
gacgggggcgtataccgctgcactgccaacaactcggcgggagtcgtcctgtaccaggct
cgaataaacgtaagagggcctgcaagcattcgaccaatgaaaaatatcacagcaatagca
gggcgggacacatacatccactgccgtgtgattggctatccctattactccatcaaatgg
tacaagaactccaatctgcttcctttcaaccatcgccaagtggcatttgagaacaatggc
actctgaaactctcggacgtgcaaaaggaagtggatgagggagagtacacatgcaacgtg
ctggttcaaccgcagctctccaccagccagagtgtacatgtgaccgtcaaagttccacct
tttatccaaccttttgagtttccaagattctccatcggacagcgggtctttatcccgtgt
gttgtggtctcaggggacttgcccatcacgatcacctggcagaaggacggccggccaatc
ccagcgagcctcggggtgaccatcgacaacatcgacttcacaagctctttgcggatttcc
aatctctccctcatgcacaatgggaattacacctgcatcgcccggaatgaggccgcagca
gtggagcaccaaagccagttgatcgtgagagttcctcccaaatttgtggttcaaccacgg
gaccaggacgggatttatggcaaggctgtcgtcctcaactgctctgccgagggctaccct
gtacccaccatagtgtggaagttctctaaaggtgctggggttccccagttccaacccatt
gccctcaatggccgaattcaggtcctgagcaacgggtccttgctgatcaagcacgtcgtg
gaggaggacagcggctactacctgtgcaaggtcagcaacgatgtgggcgcggacgtcagc
aagtccatgtacctcacggtcaaaattcctgcgatgataacgtcctatccaaacacaacc
ctggccactcagggtcagaagaaagaaatgagctgcgcagcccacggcgagaagcccatc
atagtgcgctgggagaaggaggaccggatcattaaccccgagatggcccgttacctcgtg
tccaccaaggaggtgggcgaggaggtgatctccactctgcagattttgccaactgttaga
gaagattctggattcttctcctgtcatgctatcaattcttacggggaggaccgtggaata
attcagctcacagtacaagagcccccagaccctcccgaaattgagatcaaagacgtgaag
gcgcgcacgatcaccctcaggtggaccatggggtttgacggcaacagccccattacgggc
tatgacattgaatgcaagaataaatcagactcctgggattctgctcagagaaccaaagat
gtttcccctcagctgaactcggccaccatcattgatatccacccttcctccacctacagc
atccgcatgtacgccaagaaccggattggcaagagcgagcccagcaacgagctctccatc
accgcggacgaggcagctcccgacggcccgcctcaggaggtgcacctggagcccctgtca
tctcagagcatcagggtcacctggaaggctcccaagaaacatttgcaaaatgggattatc
cgtggctaccaaataggttaccgcgagtacagcaccgggggcaacttccagttcaacatt
atcagtatcgacaccactggggacagtgagatttacaccctggacaacctcagtaagttc
acccagtacggcctggtggtgcaggcctgcaaccgggccgggacaggaccttcttctcag
gaaatcatcaccaccaccctcgaggacgtgcccagttacccccctgaaaatgtccaagcc
atagcaacatcaccagaaagcatatcaatatcctggtccacactttccaaggaagccttg
aatggaattctccaggggttcagagtcatttactgggccaacctgatggacggagagctg
ggcgagattaaaaacgtcaccacgacgcagccttccctggagctggacggcctggagaag
tacaccaactacagcatccaagtgctggctttcacccgcgccggggacggcgtcagaagt
gagcagatcttcacccggaccaaagaggatgttccaggtcctcctgcaggagtgaaggca
gccgcggcctcagcctccatggtgtttgtgtcctggcttccccctctcaagctgaacggc
atcatccggaagtacaccgtgttctgctcccacccctaccccacagtgatcagcgagttt
gaagcctctcctgactcattttcctacagaattcccaacctgagtcggaaccgtcagtac
agtgtctgggtggtagctgtgacttcagctgggagaggcaacagcagcgaaatcatcatg
gtggagccattagctaaagctccagcacgaatcctgaccttcagcggcacagtgactacc
ccatggatgaaggacatcgccttgccttgtaaagctgttggggacccttctcctgcagta
aaatggatgaaagacagtaacgggacacccagcctagtaacgattgatggccggaggagc
gtcttcagcaacggcagctttgtcatccgcaccgtgaaggcagaggactctggctactac
agctgcattgccaataacaactggggatcggatgaaattattttaaatttgcaagtgcaa
gttccacccgatcagcctcgacttaccgtgtccaaaacgacatcttcttccattacactc
tcgtggctccctggagacaatgggggcagttccatcagagggtacatattgcagtactcc
gaggataacagtgaacagtggggaagttttccaatcagcccaagtgaacgttcttaccgc
ctggaaaatctgaagtgtggtacttggtataagttcactctaactgcccaaaatggagtg
ggaccgggacgcatcagtgaaatcatagaagcgaaaacgttggggaaagaaccccagttc
tccaaggagcaagaactcttcgccagcatcaacaccacacgcgtgaggctaaacctcatc
ggttggaatgacggtggctgtccaatcacctccttcacactggagtacagaccctttggg
accacagtctggaccacagctcagcggacctctctctccaagtcctatatcctgtatgac
ctgcaggaagccacgtggtacgagctgcagatgagggtgtgcaacagtgctggctgtgcg
gagaagcaggccaacttcgccacgctcaactacgatggcagtacaatccctccactcatt
aagtcagttgtgcaaagcgaagaaggcctgacaaccaacgaggggctcaagatgcttgtg
accatctcctgcatcctggtgggggtcttgttgctgttcgtactcctgctggtggtgcgg
cggaggaggcgggagcagaggctaaagaggctgagagatgcaaagagtttagctgaaatg
ctcatgagtaagaatacccggacttcggacaccttgagcaagcaacagcagaccttgagg
atgcacattgacatacccagggctcagcttttgattgaagagagagacacaatggagacc
atcgacgatcgctccacggtcctgttaacggatgctgactttggggaggcagcgaagcag
aagtccctgacggtgacacacacggtacattaccagtcagtgtcgcaagccactgggccc
ctggtggacgtttcagatgcgcggccaggaacgaatcccaccaccaggaggaatgcaaag
gcaggacccacagcaagaaaccggtatgccagccagtggacccttaacagaccccacccc
accatttcagcacacaccctcaccacagactggaggctgccgacgcccagggctgcggga
tcaatggacaaggagagtgacagctacagtgtcagcccctcacaagacacagatcgagca
cgaagcagcatggtctctacagaaagtgcctcctccacgtacgaagaactggccagggcc
tatgagcacgccaagatggaagagcaactgaggcacgccaagttcaccatcacggaatgc
ttcatatcagacacatcatcggagcagttgacggcagggacaaatgagtacacagacagt
ctgacctccagcaccccttcagaatcggggatctgcaggttcactgcatctccccccaaa
cctcaggatggaggtcgagtgatgaatatggcggttccaaaggcacatcggccaggtgac
ctcatacatttgcctccataccttagaatggactttttgttaaaccgaagcggtgcaggc
acaagcagggacctgagtttggggcaggcgtgcttggaacctcagaaaagtcggaccctg
aagcgccccacggtccttgagccaatccccatggaggcctcctcttccacgtcctccaca
agagagggacagcagtggcagcagggggctgtggccacattacctcagcgagagggagca
gagctgggacaggcagctaagatgagcagctcccaagaatcgctgctcgactctcggggc
catttgaaaggaaacaatccctacgcaaaatcctacaccctggtataa
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integrated database retrieval system
