Mustela nigripes (black-footed ferret): 132021961
Help
Entry
132021961 CDS
T09425
Symbol
PABPC1L
Name
(RefSeq) polyadenylate-binding protein 1-like
KO
K13126
polyadenylate-binding protein
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03015
mRNA surveillance pathway
mnp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132021961 (PABPC1L)
09123 Folding, sorting and degradation
03018 RNA degradation
132021961 (PABPC1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132021961 (PABPC1L)
03041 Spliceosome [BR:
mnp03041
]
132021961 (PABPC1L)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
132021961 (PABPC1L)
mRNA cycle factors
Stress granule specific factors
132021961 (PABPC1L)
Spliceosome [BR:
mnp03041
]
Complex C
Other components
Complex C specific factors
132021961 (PABPC1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_7
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
132021961
NCBI-ProteinID:
XP_059263063
LinkDB
All DBs
Position
7:125447234..125467319
Genome browser
AA seq
616 aa
AA seq
DB search
MNASGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQ
QPADAERALDTMNFEVIKGQPVRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFS
TFGNILSCKVVCDDHGSRGFGFVHFETHEAAQQAIATMNGMLLNDRKVFVGHFKSRRERE
AELGARAMEFTNIYVKNLHVDLDEQGLQDLFSQFGKLLSVKVMKDESGHSRGFGFVNFEK
HEEAQKAVMDMNGKEVSGRLLYVGRAQKRLERQNELKRRFEQMKQDRLTRYQGVNLYVKN
LDDSIDDEKLRKEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGT
KPLYVALAQRKEERKAILTNQYMQRLSTVRALGGPLLGSFQQPASYFLPAMPQPPTQAAY
YASGAPMQPSPRWTAQPPRPSSIYPPGASVVRPPAMLRRPPAQVGGVRQVSTQVPPLVPH
AQRVAHIGTQTTGACGAGYSMPSGSLLTHKYSAATHNPGVEEPAVRIPGQEPLTASMLAA
APLHEQKQMIGERLYPLIYDTHTQLAGKITGMLLEIDNSELLLMLESPESLNAKVEEALA
VLQAHQATELTTVNVL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagcggccctggctacccgctcgcctcactctacgtgggcgacctgcacccc
gacgtgaccgaagccatgctgtacgagaagttctcgcctgccggccccatcctgtccatc
cgtgtgtgccgcgacgtggccacccgccgctcgctgggctatgcctacatcaacttccag
cagccggccgacgcggagcgggcactggacacaatgaactttgaagtgatcaaaggccag
cccgtccgcatcatgtggtcgcagcgagaccccggactccgcaagtcgggcgtgggcaac
atcttcatcaagaacctggaggactccattgacaacaaagccttatatgacacgttctcc
acctttgggaacatcctctcttgcaaggtagtatgtgacgatcacggctcccgaggcttt
ggctttgtccactttgagacccatgaggcagcgcagcaggccatcgccaccatgaacggg
atgctgctgaatgaccgcaaagtcttcgtcggccacttcaagtcccgacgggagcgggaa
gcagagctgggagcgcgggccatggagttcaccaacatttatgtgaagaacctccatgtg
gatctggacgagcagggcctgcaagacctcttctcccagtttgggaagctgctgagtgtg
aaggtgatgaaggatgagagcggccactcccgaggcttcggttttgtcaactttgagaag
catgaggaagcccagaaggcagtgatggacatgaatgggaaggaggtgagcgggcggctg
ctgtacgtgggccgggcccagaagcggctggaacggcagaatgagctgaagcgtcggttt
gagcagatgaagcaggaccggctgacccgttaccagggcgtgaatctgtacgttaaaaac
ctggatgactccattgatgatgagaagctgagaaaagagttctctccctatggagtgatc
accagtgctaaggtgatgacagagggtggccacagcaaggggtttggctttgtgtgtttt
tcctctccagaagaggcgaccaaggccgtgacagagatgaacgggcgcatcgtgggcacc
aagccgctgtacgtggcactggcccagcgcaaagaggagcggaaagccatcctcaccaac
cagtacatgcagcgtctctccaccgtgcgggccctgggtggccccctcctgggctccttc
cagcagcccgccagctacttcctgcccgccatgccccagcctccaactcaggctgcgtac
tacgcttccggcgcccccatgcagccctcccccaggtggacagcccagcctccgagaccg
tcctccatctaccctccaggtgcctccgtggtccggccaccagccatgttgcggcgtccc
ccggcccaggtcggcggtgtcaggcaggtctctacccaggtgccacccctggtgccccac
gcccaaagagtggcccacattggtacccagaccacaggagcctgcggggcgggatattct
atgccaagtgggtctctcctgacacacaaatactctgcagcaacacacaaccctggggtg
gaggagcccgctgtgcgcatcccgggacaggagcccctgacggcgtccatgctggctgca
gcaccgctgcacgagcaaaagcagatgattggtgagcgtctgtacccccttatctacgat
acccacacccagctggccggcaagatcacgggcatgctactggagatcgacaactcagag
ctgctgctcatgctggagtccccagagtccctcaatgccaaggtggaagaggctttggca
gtgctgcaggcacaccaggccacagagctgacgactgtgaatgtgctctga
DBGET
integrated database retrieval system
