Mustela nigripes (black-footed ferret): 132023085
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Entry
132023085 CDS
T09425
Symbol
DDX55
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mnp03009
]
132023085 (DDX55)
Enzymes [BR:
mnp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132023085 (DDX55)
Ribosome biogenesis [BR:
mnp03009
]
Eukaryotic type
Pre-60S particles
Helicases
132023085 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
SBF_like
Helicase_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
132023085
NCBI-ProteinID:
XP_059264238
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Position
8:complement(5764455..5779419)
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AA seq
600 aa
AA seq
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MEHVTEGSWESLPVRLHPRVLGALRELGFSYMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKYQVGALIITPTRELAIQIDEVLAHFTKHFPQFSQILWIGG
RNPGEDVAKFKEQGGNIIVATPGRLEDMFRRKAEGLALAGCVRSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVESLVRAGLRNPVRISVKEKGVAASSTQKTPS
RLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEALVKGVQIMCIH
GKMKHKRDKIFMGFRRLQSGILVCTDVMARGIDIPEVNWVLQYDPPSSASAFVHRCGRTA
RIGHGGSALVFLLPMEESYVSFLEINQKCPLQXMKLQKNTGDLLPKLKSMALSDRAMFEK
GMKAFVSYVQAYAKHECNLIFRIKDLDFASLARGFALLRMPKMPELRGRQFPDFVPVDVN
TDTIPFKDKVREKQRQKLLEQQRKEKRENEGRKKFIKNKAWSKQKAKKEKKKQMNEKRMR
EEGSDIEDEDMEELLNDTRLLKKFKKGKITEEEFEKGLFSSGKRTVSRADTGMPDSEEDC
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacggagggctcctgggagtcgctgcccgtgcggctgcacccgcgggtg
ctgggcgcgctgcgggagctgggcttctcgtacatgacgccggtgcagtctgcaaccatc
cctctgttcatgaaaaacaaagatgtcgctgcagaggcggtcacaggtagtggcaaaacg
ctcgcttttgtcatccccatcctggaaattcttctgagaagggaagagaagctaaaaaag
tatcaggtcggggcgctcatcatcacacccacgcgggagctggctattcagatagatgaa
gtcctggcgcatttcacgaagcacttcccgcagttcagccagattctctggatcggaggc
aggaatcctggagaagatgttgcaaagtttaaggaacaaggtgggaacatcattgtggcc
actccaggccgcctggaggacatgttccggaggaaggcagaaggcctggctctggccggc
tgtgtgaggtccctcgacgtcctggtgttggatgaagcagacagactcctggacatgggg
tttgaggcaagcataaacaccatcctggagtttttgccaaagcagaggagaacaggcctt
ttctctgccactcagacccaggaagtggagagcctggtgcgagcagggctacggaacccc
gtccggatttcggtgaaggagaagggcgtcgcagccagcagcactcagaaaactccttcc
cgtctggagaactactacatggtatgtaaggcagatgagaaatttaaccagttggtacat
tttcttcgaaatcataagcaggaaaaacacctggtcttcttcagcacctgtgcctgtgtg
gaatactacggaaaggctttggaggccctggtgaagggtgtgcagatcatgtgcattcac
gggaagatgaaacacaagcgtgataagatcttcatggggttccgcagattgcagagtggg
attttagtgtgcacggatgtcatggcccgaggaatagacattcctgaagtaaactgggtt
ttgcagtacgaccctcccagcagcgcaagtgcctttgttcatcgctgtggccgtacagcc
cgcatcggccacggtggcagcgcgctcgtgttcctccttcctatggaagagtcctacgtc
agtttccttgaaattaaccaaaaatgccccctgcagnggatgaaactccagaaaaacaca
ggagacctccttccaaagctcaagtccatggccttgtccgacagagcgatgtttgaaaag
ggcatgaaagcgtttgtgtcctatgtccaggcttatgcgaagcacgaatgcaacctcatc
ttcagaataaaggatcttgattttgctagtcttgctcgaggatttgccctgctgaggatg
cccaagatgccagaactcagaggaaggcagtttccagatttcgtgcctgtggatgttaac
acagacaccattccatttaaagataaagttagagagaagcagaggcagaaactactggag
caacaaaggaaagagaaaagagaaaatgaagggagaaaaaaattcataaaaaataaagct
tggtcaaagcaaaaggccaaaaaggagaagaagaaacaaatgaatgaaaaaaggatgagg
gaagagggttccgatattgaagacgaggacatggaggaacttctcaacgacacgaggctc
ttgaaaaagtttaagaaaggcaaaattactgaagaagaatttgagaaggggttgttttcg
agcggcaagagaacagtctcgagagcagatacggggatgcctgattcggaagaggactgc
tga
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