Mustela nigripes (black-footed ferret): 132028706
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Entry
132028706 CDS
T09425
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03022
Basal transcription factors
mnp03420
Nucleotide excision repair
mnp05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132028706
09124 Replication and repair
03420 Nucleotide excision repair
132028706
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
132028706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnp03021
]
132028706
03400 DNA repair and recombination proteins [BR:
mnp03400
]
132028706
Transcription machinery [BR:
mnp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
132028706
DNA repair and recombination proteins [BR:
mnp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
132028706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
VWA_3
Motif
Other DBs
NCBI-GeneID:
132028706
NCBI-ProteinID:
XP_059274009
LinkDB
All DBs
Position
12:96959711..96985074
Genome browser
AA seq
395 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKSAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDSNTEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEHNGEKFCYGCQGELKDQHVYVC
AVCQNVFCVDCDVFVHDSLHCCPGCIHKIPTSSSI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaacctgaaagaactaagcgatgggaaggaggctatgaaaggacatgggag
attcttaaagaagatgaatcgggatcacttaaagctacaatagaagacattctcttcaaa
gcaaagagaaaaagagtatttgagcaccatggacaagttcgacttggaatgatgcgtcat
ctttatgtggtagtagatggatcaagaacaatggaagaccaagacttaaagccaaataga
ctgacttgtactttaaagttattggaatacttcgtagaagaatattttgatcaaaatcct
attagtcagattggaataattgtaacaaagagtaaaagagctgaaaaactgactgaactc
tcaggaaacccaaggaaacatataacatctttgaagaaagctgtagatatgacctgccat
ggagaaccatctctctataactccttaagcatggctatgcaaactctaaaacacatgcct
ggacatacaagtagagaagtcctaatcatctttagcagcctcacaacttgtgatccatct
aatatctatgatctaatcaagaccctaaagtcagctaaaataagagtgtctgttattgga
ttgtctgcagaggttcgggtttgcactgtacttgctcgtgaaactggtggcacataccat
gttattttagatgaaagccattacaaagaattgctgacacatcatgttagtcctccacct
gctagctcaagttctgaatgttcacttattcgcatgggatttcctcagcataccattgct
tctctgtctgatcaagatgcaaaaccctctttcagcatggcgcacttggatagcaacact
gagccaggacttacattaggaggatacttctgcccacagtgtcgggccaagtactgtgag
cttccagttgaatgtaaaatctgtggtctcactttggtgtctgctccacatttggctcgg
tcctaccatcatttatttcctttggatgcttttcaagaaattcctctagaagaacataat
ggagaaaaattttgttatggatgtcagggggaattgaaagaccaacatgtctatgtttgt
gctgtgtgccaaaatgttttctgtgtggactgtgatgtttttgttcacgactctcttcat
tgttgtcctggctgtattcataagattccaacttcttcaagtatttga
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