Morus notabilis: 21389092
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Entry
21389092 CDS
T07292
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mnt
Morus notabilis
Pathway
mnt03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
21389092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnt03400
]
21389092
Enzymes [BR:
mnt01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
21389092
DNA repair and recombination proteins [BR:
mnt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
21389092
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
BRCT
DNA_ligase_A_C
PTCB-BRCT
RNA_ligase
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
21389092
NCBI-ProteinID:
XP_024031284
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MATEETKISVLCSLFNWMLRSKPAAKKRSKFRKFLDTFCKNGDYFPAIRLLLPNLDRERG
SYGLKESVLATSLIDALGISRDSEDALRLINWRKGGAAKAGAYAGNFALVAFEILERRQG
MASGGLTIKELNDLLDRLASSESRSEKISVLSTLISKTNAQEMKWIIMIILKDLKLGISE
KSIFHEFHPDAEDLFNVTCDLKLVCEKLRDRSQRHKRQDIEVGKAVRPQLAMRVADATTA
WKKLLGKEVLVECKFDGDRIQIHKNGTDIHYFSRNFLDHTEYEHGMSDIIKQNVLADRCI
LDGEMLVWDTSLNRFAEFGSNQEIAKAARDGFDSDRHLCYVAFDILYVGDTSVIHQSLKE
RHELLQRVVKSLKGRLEILLPDGGGLNTRRSPGEPCWSLIAHNVDDVEIFFKETIENRDE
GIILKDLGSKWEPSDRSGKWLKLKPDYVRAGSDLDVLIIGGYYGSGRRGGEVAQFLVGIA
ERPTPNTHPRRFISFCRVGTGLSDEDLDAVVNKLKPFFRKYEYPKKAPPSFYQVTNNSKE
RPDVWIDSPEKSIILSITSDIRTIRSEVFAAPYSLRFPRIDRVRYDKPWHECLDVQSFIE
LVQTTNGTTHRGTDSAAVQHSKQKRTKSSTREDKKKLSVVPSHLVQTDISGVKEGDTIFS
GMMFYFVNVPPTHSLDSLHKMVAENGGTFSMNLNNSVTHCVAAESKGIKFQAAKLRGDII
HYSWLLNCSSQKKLLPLQPKYFLFLSDSSKKKLQEEIDEFSDSYYWDLDLAGIKQLLSNV
DRAEDTKTIDHFKEKYSLAKWSRFHGCFIYFHASPESLKPDWEVLLGLSLRRLKVEVNMN
GGRVSNSLAQATHLVVLSVPGFTLDLENVLQSFSGTEKRLIWNGKLHIVQSQWLEDCVER
EQRLPEETYSLKPLLEQLKIEDWNQDMDLEVSSDLDIVKKQNVSLSPSKEGNNRKGSEAP
ESPGIRPVLEVGSKRKRGRPAGNRGKAVAKPARKTRARVGSKAAKISGNESDDSVSDEEN
TTKEESKQLGESHGNIVEEQSQISKAKGGAKQVRRTRARIGKKPAKISGNESEDNASQDE
STFKEPANKQIEDIHERIDIGTSQTRETKTIEKSESSEKGNADKQEGEGNIRYWFNKVPE
NETSEKQNSENSQPPPPPPEKLELMTDPVHAMLLDMIPRLGKEKVEITNTSTEDKKPAVD
PNAPQPKKKKVSYKDIAGDLLKDW
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggaggagaccaagatcagcgtcctgtgcagcctcttcaactggatgcttcgg
agcaagcccgccgccaagaagcgctccaagttccgcaagtttctcgacactttctgcaaa
aatggcgactacttccccgccattcgactgctcctccccaacctcgaccgtgagagggga
tcctacggcctcaaggagtccgtcctcgcgacgtccctcatcgacgctctcggcatctcc
agggactccgaggacgcgctccgcctaatcaattggcggaagggcggcgccgccaaggcc
ggagcttacgccggtaacttcgccctcgtcgccttcgagatactggagcgtaggcaagga
atggcttctggtggactaacaatcaaggagctgaatgacttgctggatcgtttggcttca
agtgaaagcaggtcagagaagatttcagttctctctactttgattagcaagacaaatgca
caagaaatgaagtggattattatgattattctaaaagatctgaagttggggatcagtgaa
aaaagcatctttcatgaatttcatccagatgcagaagacttgttcaatgtcacctgtgac
ttgaaattggtctgtgaaaagcttagagatcgaagtcaacgccataagcgtcaggacatt
gaagttggaaaagcagttcgtcctcaactagctatgagagttgcggatgcaactactgca
tggaagaagcttcttggaaaggaagtgcttgttgagtgcaaatttgatggtgatcgcatc
caaattcacaagaatggaactgatatacattacttctcaaggaattttcttgatcacaca
gaatatgaacatggaatgtcggatattattaaacaaaatgttctggctgataggtgtata
ttggatggtgaaatgttggtgtgggacacatctttaaatcgttttgccgagtttggttca
aaccaagagatagctaaggcagcaagggatggatttgatagtgatcgtcatttatgctac
gttgcatttgatattctttatgttggagacacaagtgtaattcatcagagcttgaaggaa
cgacatgagctgcttcaaagagttgtgaagtctttgaagggccgtctagaaatcttacta
ccagatggtggtggtcttaatactcgtcgttctccaggtgaaccttgttggtcgcttatt
gctcataacgttgatgatgttgaaatatttttcaaagagactattgaaaatagagatgaa
gggattattctgaaggatcttggttccaagtgggaacctagtgataggagtggaaagtgg
ttgaaattgaagcctgattatgttcgtgctggttctgatctggatgttctcataataggg
ggatactatggctctggacgtcgtggaggggaggtggctcaattcttagtgggcattgca
gagcgtccaacaccaaatacacatccaagacgatttatatcgttttgtagagtgggtact
ggactttctgatgaggatctagatgctgttgtaaacaagttaaagccttttttcaggaag
tatgaatatcccaagaaggccccaccaagcttttatcaagtgacgaataattccaaagag
aggccagatgtttggattgacagcccagagaaatcaataatactttctattaccagtgac
attcgaactataaggtctgaggtttttgctgcaccatacagcttgagatttccacgtatt
gaccgagttagatatgacaagccttggcatgaatgccttgatgtgcaatcatttatagag
ctggtacaaacaaccaatggcaccacccatagggggacagattctgctgcagtgcaacat
agtaaacaaaaacgcacgaaatcctctacaagggaagacaaaaagaagctgtctgtcgtt
ccttcacatttagttcaaacagatatttctggtgttaaggagggcgacacaatattttca
ggcatgatgttctactttgtgaatgtgcctccaactcattcgctcgactccttgcacaaa
atggttgctgaaaatgggggcactttttccatgaatctgaacaattcagtcactcattgt
gttgcagctgaaagcaaggggattaaatttcaggcggcgaagcttcgtggagatattatt
cattactcttggctattgaattgctcttctcaaaagaagctccttcctctacaaccaaag
tatttcctctttctatctgattcttcaaaaaagaagttacaagaagaaattgatgagttt
tctgactcgtactactgggatctagaccttgctggcatcaaacagctcttaagcaatgtg
gatagagcggaagatacaaaaacaattgatcatttcaaggaaaagtacagtctggccaag
tggtcccgcttccatggctgcttcatatacttccacgcgtcaccagagtctctgaaaccg
gattgggaagtgttgttggggctctctcttcggaggttaaaagttgaagtcaacatgaat
ggtggcagagtcagcaatagtcttgctcaggctacccatttggttgtcttatcagtccca
ggatttaccctggacttggaaaatgtattgcaaagttttagtggaacggaaaaacgtctt
atctggaatggaaagttacatattgtccaatctcaatggttggaagattgtgtggaaagg
gaacaaaggttgccagaagaaacatatagtttgaagcctttgctggaacagttgaaaatt
gaagattggaatcaggacatggatctagaagtctcttctgatctcgacattgtgaagaag
cagaatgtttcattgtcacctagcaaagaaggaaataatagaaaaggcagtgaggctcca
gaaagcccaggaatccggcctgtacttgaggttggttccaagaggaaacgaggaagacct
gctgggaacagaggaaaagcagtggcaaagccagctcgtaaaactcgagcacgtgttgga
agtaaggctgctaaaatatctggaaacgaatcggatgatagtgtttctgatgaagaaaac
actactaaagaagagagcaaacaactgggggaaagtcatggaaatatagttgaggaacaa
tcgcaaataagcaaagcaaaaggaggcgccaagcaagttcgaagaacaagggcacgcatt
ggaaagaagcctgctaaaatatctggcaatgaatcagaggataatgcttctcaagacgaa
agtacattcaaagaaccggccaacaagcaaatagaggatatccatgagaggatagatata
ggcacttcacaaacccgtgaaaccaaaacgatagaaaagtccgagtcatcagaaaaaggc
aatgcggataagcaagaaggtgaagggaatattaggtattggttcaataaagttcctgag
aatgaaacgagtgaaaagcaaaatagtgaaaacagtcagccgccgccgccgccgcccgag
aagcttgaacttatgactgatcctgttcatgccatgttgttggacatgattccgaggctt
ggaaaggagaaagtcgaaattacaaatacaagtactgaagataagaagccagcagtggat
cctaatgcaccacagcctaaaaagaagaaagttagctacaaggatattgctggggaccta
ctcaaggattggtag
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