Morus notabilis: 21395429
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Entry
21395429 CDS
T07292
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
mnt
Morus notabilis
Pathway
mnt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
21395429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnt03041
]
21395429
Enzymes [BR:
mnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
21395429
Spliceosome [BR:
mnt03041
]
Complex C
Other components
Step II factors
21395429
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
ABC_tran
nSTAND3
AAA_30
TsaE
AAA_16
Sigma54_activ_2
Flavi_DEAD
T2SSE
PhoH
Motif
Other DBs
NCBI-GeneID:
21395429
NCBI-ProteinID:
XP_010091308
UniProt:
W9QN92
LinkDB
All DBs
Position
Unknown
AA seq
1205 aa
AA seq
DB search
MAATDEGLKKLEYLSLVSKVCTELENHLGFGDKVLAEFITEMGQNCDTVDEFDAKLKENG
AEMPDYFVRTLLTIIHAILPPKPKSEKDLKIDNDSDGNKTKYGALAIADNKDRAKELEKE
IEAEARKRRREERDEDREENRYRGRDRDRDRERDRDRDRDRNGERNRDRDRDRDRDKDRD
RDRRGDKYGGEAKRKEKDDYADDVDRGRHRDRYEVNRRGGYGENGDFTGHDDDRRGSRDS
RNGRSHSDEPELYMVYKGRVSRVMDSGFFVQLNDFRGKEGLVHVSQIATRRITNAKDVVK
RDQEVYVKVISVSVQKLSLSMRDVDQNTGRDLLPMKKSSEDDAFRTNPSGSKEGPVTRTG
ISGIRILEEDDLGSSRRPLKRMSSPEKWEAKQLVASGVFSINEHPMYDEEGDGLLYQEEG
AEEELEIELNDDEPAFLNGQSRYSVDMSPVKIFKNPEGSLSRAAALQSALIKERREVREQ
QQRTMLDSIPKDLNRPWEDPMPETGERHLAQELRGVGLSAYDMPEWKKDAFGKTISFGQR
SKLSIQEQRQSLPIYKLKKELVQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKI
GCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTSPDTVIKYMTDGMLLREILID
ENLSQYSVIMLDEAHERTIHTDVLFGLLKKLVQRRPDLRLIVTSATLDAEKFSGYFFNCN
IFTIPGRTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQSL
YERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFY
VIDPGFAKQNVYNAKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMS
PTSIPEIQRINLGSVTLSMKAMGINDLLSFDFMDPPAPQALISAMEQLYSLGALDEEGLL
TKLGRKMAEFPLEPPLSKMLLASVDLGCSEEILTIIAMIQTGNIFYRPREKQAQADQKRA
KFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLSIMDKYKLDV
VSAGKNFTKIRKAITAGFFFHGARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHE
LVMTTKEYMREVTVVDPKWLVELAPRFFKVADPTKMSKRKRQERIEPLYDRYHEPNSWRL
SKRRA
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacagatgagggtctaaagaagctcgaatatttatcactggtctccaaggtc
tgcactgagcttgagaaccacttaggctttggagacaaggttctggctgagttcataact
gagatgggtcaaaactgtgataccgtcgatgaattcgatgccaagttgaaggaaaatgga
gctgaaatgccggattactttgtccgtactttgttaactataatccacgccatccttccc
ccaaagcccaagtctgagaaggatttgaagatagataatgattctgatggtaataagacg
aagtatggagcattggctatagctgataataaggatagagcgaaagagcttgagaaggaa
attgaggcggaggctcggaagaggcgtagagaagaacgggatgaagaccgagaagaaaac
aggtatcgaggtagagatagggacagagacagagaaagagatagagacagagatagggac
agaaatggagaaagaaatagagatagagatagagatagagatagggacaaggacagggac
agagataggcgcggagataaatatggcggggaagcaaagcgcaaggaaaaggacgattat
gccgatgatgttgatagagggaggcatagagatcgatatgaagtgaatagaagaggtgga
tatggtgagaatggggattttacgggacatgatgatgatcggagaggtagtagggactcg
aggaatgggcggtcccattccgatgagcctgaactgtatatggtctataagggcagggtg
tcgagagtaatggacagtgggttctttgtccaattgaatgacttcaggggtaaggagggt
ttggtccacgtgtcacagattgcaacccggcgaattactaatgcgaaagatgttgtgaag
agggatcaagaggtttatgtgaaggtgatttcagtgtcagttcagaagttgagcctttca
atgagggatgttgatcagaatacggggagggatttgcttcccatgaaaaagagctcagag
gatgatgcttttcggacaaatccatctgggtccaaggaggggcctgtgactagaaccgga
atatctggtattaggattttggaagaggatgatcttgggtcttcacgccgacccttgaag
cgcatgagctctccagagaaatgggaagctaagcagttggtagcctctggtgttttcagc
attaatgagcatcctatgtacgatgaagaaggagatggattgctgtatcaggaagagggt
gcagaggaagagcttgagatcgagctaaatgatgatgaaccggcttttctgaatggccag
agtaggtattcagtggatatgtcacctgtgaaaatctttaagaatccagaagggtcattg
agtcgggcagctgcacttcaatctgctctcattaaggagcgtagggaagtacgggagcag
cagcaacgaactatgctggattccattcccaaggatctcaatcgtccatgggaagatcca
atgccagagacgggtgagaggcatcttgcacaagagcttaggggtgttggtttgtcggcc
tatgacatgcctgagtggaagaaggatgcttttgggaaaacaatcagttttgggcagagg
tcaaagctctcaattcaggaacaaaggcagagcttgcccatatacaagctgaaaaaagaa
ctcgttcaggcagtgcatgataatcaagttctggtcgtcattggtgagactggctccggt
aaaactacccaggtcacacaatatcttgctgaagccggttacactacaaagggcaaaatc
ggatgcactcagccccgtagagtggctgcaatgtctgtggccaagagggttgcagaagaa
tttggttgtcgcttgggtgaggaagttgggtatgcaattcgtttcgaagattgtactagt
ccagatacggtcatcaagtacatgactgatggtatgcttctaagggagattttgattgat
gagaatctttctcagtactctgtgatcatgcttgatgaagctcatgagaggacaatccat
actgatgttctctttggactgctaaagaaacttgtgcagcggagaccagatcttcgttta
attgtaacgtctgccactctggatgcggagaagttttcaggttatttctttaactgtaac
atcttcaccatccctggtcgaacgtttcccgtggagatcctctacaccaaacaaccagaa
agtgattacctagatgctgctctaatcacagtcttacaaatccacttgactgaacctgaa
ggtgatgtccttctttttttaactggacaagaggagatcgactttgcctgccaatctcta
tatgagagaatgaaaggcttaggtaaaaatgttccggaattgattatcctacccgtctat
agtgcacttcctagtgaaatgcaatcgaggatatttgaccctgctcctcccgggaagagg
aaagtggttgttgctactaacattgctgaggcatcattgaccattgatggcatattctat
gtcattgaccctggatttgcgaagcaaaatgtgtataatgcaaagcaaggtttggattcg
ctggtaataactccaatttctcaagcatcagccaagcagcgagctggccgagctggtcgt
acaggccctggaaaatgttaccgcctttatactgaaagtgcgtaccgtaatgagatgtct
cctacatcaattcctgaaattcaaagaataaaccttggatcggttacactctctatgaaa
gcgatgggtataaacgatctcttatcttttgattttatggacccacctgcaccccaagct
ctcatttctgccatggagcagctctacagtttaggtgcactggatgaagaggggcttctg
accaaattgggcaggaagatggccgagttccctcttgaaccaccattatctaagatgcta
cttgctagtgtggaccttggatgcagtgaagagatcttgactatcattgctatgattcag
acaggcaatatcttttacaggcctcgtgaaaaacaagcccaagcagatcagaagagggcc
aagtttttccaaccagagggagaccatctgactttacttgctgtctacgaggcctggaaa
gctaaaaacttttccgggccatggtgttttgagaattttgtccagtctcgatccttgagg
agagcacaggatgtcagaaaacagcttctcagcatcatggataagtataaattggacgtt
gtgagtgcaggaaagaattttacgaagatcagaaaggcaataacagcaggatttttcttc
cacggggctagaaaagacccgcaggagggttacagaactctggttgagaatcagccagtc
tacatccacccaagcagcgctcttttccaacgacaaccagactgggtcatttaccatgag
cttgttatgactacaaaagagtatatgcgagaggtcaccgttgtagacccaaaatggctt
gttgaattggcgccgagattcttcaaagtggcggatcctacaaagatgagtaagcgcaag
cgtcaagagcgtattgagccgctctatgatcgataccatgaacctaactcttggcgtttg
agtaagagacgtgcttga
DBGET
integrated database retrieval system
