Morus notabilis: 21397285
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Entry
21397285 CDS
T07292
Name
(RefSeq) E3 ubiquitin-protein ligase COP1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
mnt
Morus notabilis
Pathway
mnt04120
Ubiquitin mediated proteolysis
mnt04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
21397285
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
21397285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnt04121
]
21397285
Enzymes [BR:
mnt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
21397285
Ubiquitin system [BR:
mnt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
21397285
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
21397285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_UBOX
WD40_like
zf-C3HC4_4
zf-RING_5
zf-Nse
zf-RING_10
APG6_N
zf-rbx1
DUF1664
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
21397285
NCBI-ProteinID:
XP_010099137
UniProt:
W9R960
LinkDB
All DBs
Position
Unknown
AA seq
673 aa
AA seq
DB search
MGESSIGATVPFVKAEALLESSAGPPVPPPLQPAEEDVAMEDADKDILCPICMQIIKDAF
LTACGHSFCYVCLVTHLRNKSDCPSCGHYLTTAHIFPNFLLDKCLKKTSASRVAKTASPF
EHFRQALQQGLEVSIKELDDLLSLLSEKKRKMEQEEAETNMQIMLSFLHCLRKQKLEELT
EIQSDLQYIKEDINAVERRRIDLYREKERFSGRMRMLVDDPIAEKASPSFDKHANGINYS
VYSAHTQMGSGSSQNKKPDANALANFQALQRKGAYGAEGLQSCTPSGLALERKRQVYSQF
NDLQECYLQKRRNWIKHLHKGDERSTKNSSKEDYSPGLEDFQSVLNTFTRYSRLRVIAEL
RHGDIFQSANILSSIEFDRDDEFFATAGVSRRIKVFEFSSVVNEPADIHCPIVEMPTRCK
LSCLSWNKYTKSHIASSDYEGIVTVWDVTTRQSVMEYEEHEKRAWSVDFSRSEPAMLVSG
SDDCKVKIWCTRQEASVLNIDMKANICSVKYNPGSSIYVAVGSADRHIHYYDLRNISQPL
HVFSGHMKAVSYVKFLSNTELASASTDSTLRLWDVKDNLPLCTYRGHTNEKNFVGLTVNS
EYISCGSETNEVFVYHKAISKPMACHKFSSSGSNENEDDAGSYFISAVCWKSDSPTMLTA
NSGGTIKVLVLAP
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgggagagagctcaattggcgccacggtccccttcgttaaagccgaagccttgctggaa
tcctccgccggacctccggttccgccgccgctgcaaccggcggaggaggatgtggccatg
gaagacgccgacaaggacatactctgtccgatatgtatgcagattataaaggacgcattc
cttactgcttgtggccatagcttttgttacgtgtgcctcgttactcaccttcgcaacaag
agcgattgtccttcttgcggtcattacctcactaccgcccatatcttccccaatttcttg
ctcgacaagtgtctgaagaaaacttcggcttctcgagtagcaaagactgcatctccgttt
gaacattttcgtcaggcattacagcagggtcttgaggtgtcaattaaagagctagatgat
ctactttctctcctgtcagagaaaaagaggaaaatggagcaagaagaagccgagacaaac
atgcaaatcatgctcagtttcttacattgcctgaggaagcaaaagctagaagagctcact
gagatacaatccgatcttcagtacattaaggaggacataaacgctgtagagaggcgaaga
atagatctgtatagggaaaaggagagattctcgggaagaatgagaatgctcgtcgatgat
cctattgcggaaaaggcgtcaccttcttttgataaacatgctaatggcatcaactacagt
gtctattctgcacatacccaaatgggttctggcagttcacagaacaagaagcctgatgca
aatgctctagcaaacttccaggcactccaaaggaagggtgcttatggtgcggaaggtttg
cagtcttgtactccgtcaggactagctctagaaaggaaaagacaggtctattcacagttc
aacgacttacaagagtgttacttgcaaaagcgacgaaattggattaaacacttacataaa
ggggatgaacggagcacaaaaaattctagcaaagaagattatagtccaggtcttgaagat
tttcagtccgtgttaaatacctttacacgatatagtcgattgagagtcattgccgaattg
aggcatggtgacatttttcaatctgctaacattttgtccagtattgaatttgatcgtgat
gatgaattctttgccactgctggagtttcacggcgcatcaaggtttttgaattttcctcg
gtcgttaatgaaccagccgatatccactgccctattgttgagatgccaacacgatgtaaa
cttagttgtttgagctggaataagtacacaaaaagccatatcgcaagtagtgactatgaa
gggatagtaactgtttgggatgtaactacgcgtcagagtgtgatggaatatgaggagcat
gaaaagcgagcttggagtgttgatttttcacgtagtgaacctgcaatgcttgtatctggc
agtgatgactgtaaggtcaaaatttggtgtacaaggcaagaagcaagcgttcttaacatc
gacatgaaagcaaacatttgttctgtcaaatataatcctggatccagcatatacgtggca
gttggttctgcagatcgtcacattcattactatgacttgagaaatatcagccaacccttg
cacgtatttagcggacatatgaaagctgtttcgtacgtgaaattcctgtctaacactgaa
cttgcttcagcatctactgacagcacattgcgcttgtgggatgtaaaggataatttgcct
ctttgcacgtatcgaggccacacgaacgaaaagaatttcgttggcctaacagtaaatagt
gaatacatttcttgtggcagcgagacaaatgaagtatttgtctatcataaggcaatctct
aagcccatggcatgtcataagtttagttcttcagggtcaaatgagaatgaggacgacgca
gggtcatacttcattagtgctgtgtgttggaagagcgatagcccgacaatgttaaccgca
aacagcggaggaacaattaaagtcctagtacttgcaccctga
DBGET
integrated database retrieval system