KEGG   Morus notabilis: 21397548
Entry
21397548          CDS       T07292                                 
Name
(RefSeq) general transcription factor IIH subunit 2
  KO
K03142  transcription initiation factor TFIIH subunit 2
Organism
mnt  Morus notabilis
Pathway
mnt03022  Basal transcription factors
mnt03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mnt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    21397548
  09124 Replication and repair
   03420 Nucleotide excision repair
    21397548
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mnt03021]
    21397548
   03400 DNA repair and recombination proteins [BR:mnt03400]
    21397548
Transcription machinery [BR:mnt03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     21397548
DNA repair and recombination proteins [BR:mnt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     21397548
SSDB
Motif
Pfam: Ssl1 C1_4 VWA_2 IBR VWA FYVE_2 Tfb4 Rgg_C
Other DBs
NCBI-GeneID: 21397548
NCBI-ProteinID: XP_010104122
UniProt: W9RVY0
LinkDB
Position
Unknown
AA seq 423 aa
MNNNGEERRLNGAAEDDDDDEDDDGNGRGLEAWERTYADERSWESLQEDESGLLRPIDNK
TFYHAQYRRRLRSASAVRIQKGLIRYLFLVIDLSKAAAEMDFRPSRMAVVAKHVEAFIRE
FFDQNPLSQVGLVTIKDGVAHCLTDLGGSPESHVKSLMGKLECSGESSIQNALDLVHDYL
NQIPSYGHREVLIFYSALSTCDPGDIMETIQKCKKSKIRCSVIGLSAEIFICKHLCQETG
GSYSVALDESHFKELILEHAPPPPAIAEYAIANLIKMGFPQRAAESSIAICSCHKEAKAG
GGYTCPRCKARVCELPTECQTCGLTLISSPHLARSYHHLFPIVPFDEMSTSLLSDPHRKL
SKACFGCQQSLLGFGNKPGPRVSCPKCKHQFCLDCDIYIHESLHNCPGCESARHSKPVAM
SEE
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgaacaacaatggcgaggaaagaagactgaacggagcagcagaggacgacgacgacgac
gaagacgacgacggaaatggtcgaggccttgaggcctgggagagaacctacgccgacgag
aggtcctgggaatctcttcaagaggacgagtcgggtcttctccgacccatcgataacaag
accttttaccatgcccagtatcgccgccgtcttcgctccgcttccgccgttcgaatccag
aagggcctcattcgctacctcttccttgtcattgatctctccaaggcggctgcggagatg
gatttccggccaagtcgaatggctgtagtggcaaagcatgttgaggctttcattagagag
ttctttgaccagaatccgcttagtcaagttggcctagtgactattaaagatggcgttgct
cattgcttaacggatctcggtggcagtccagagtctcatgtgaaatctttgatgggtaaa
ttggaatgctccggtgaatcttctatacagaacgctctggatcttgttcatgactatcta
aatcagattccatcatatggccaccgtgaagttcttatcttttattcggccctaagtacg
tgtgatccaggtgatataatggagaccatccagaaatgtaagaaatctaaaataaggtgt
tcagttattgggctctcagcagaaatttttatatgcaaacatctctgccaagaaactggt
ggctcatactccgttgcgttggatgagtctcacttcaaagaattgatactcgagcatgca
cccccacctccagcaatagctgagtatgcaattgctaatttgatcaagatgggcttccca
caaagagcagcagagagctctattgcaatctgttcatgtcataaggaagcaaaggcagga
ggtggatacacttgtcctagatgcaaggcgcgtgtttgtgagctacctacagagtgtcaa
acttgtggattgacgctcatttcttcaccccatttggcaagatcttatcatcatctcttt
ccgatagtaccgtttgatgagatgtctacatcactactaagtgatccacatagaaaatta
tcgaaagcttgttttggctgccaacagagtctccttggttttggaaataaacctggtccc
cgtgtttcatgcccaaaatgcaagcatcaattttgcctcgactgcgacatttatattcat
gagagcttgcacaactgcccaggttgtgagagtgcaaggcattctaagccagttgctatg
agtgaagaataa

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