Macrobrachium nipponense (oriental river prawn): 135205445
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Entry
135205445 CDS
T09903
Name
(RefSeq) agrin-like isoform X1
KO
K06254
agrin
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz04512
ECM-receptor interaction
mnz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135205445
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135205445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mnz00535
]
135205445
Proteoglycans [BR:
mnz00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
135205445
BRITE hierarchy
Motif
Pfam:
Laminin_G_1
Laminin_G_2
Kazal_2
Kazal_1
CFAI_KAZAL
Laminin_EGF
EGF
Laminin_G_3
EB
hEGF
Motif
Other DBs
NCBI-GeneID:
135205445
NCBI-ProteinID:
XP_064092103
LinkDB
All DBs
Position
24:12293858..12547475
Genome browser
AA seq
1991 aa
AA seq
DB search
MSNVYAAYGPVPTSVGVTASPRLNGSLDRRIIVQGRSATLGRTNPGAATRHVHHHGAMGI
GSSYQDLRRSRECLDIKQIPMEVMQPLEPLGIGDGKLHGSIEAFPTLPITTLERRRNGGL
VTGGCSVHGGTLSRVGSRAGSRYQLADDRRVSGGGRGGCCRKSCCTLTLSLIACLLILGG
VIVALYFFIKNVPYEHQPPTQENFNLWRNFPVRNPCHGRKCHHGALCVLTNDGRSARCEC
PIDCHQYGGMTGPGASDGMNVVCGSDGKNYDSECQLRRHACRTQKHLEVRFPGKCDPCED
ISCPERQICQLDRDRLPVCRCNDVCAKDYDAVCASDGKTYTNECVMKLEACRARKTLWII
YNGECDLGLNPCDAISCMAGEECNVDKKGIARCECPMPCEKVMRPCAETDGETYDNLCEL
QRSVCVNQVDIDVSYNGVCGEEGPCAGHECGHGGLCVDRQGLPVCECPQCPPQLDPVCGT
DGISYDNECHLRAEACRIHRNLTVRYRGKCSGCEDKQCNFYGICEADEKGVGRCVCPEGC
VKAESKVCGTDGETYLNECLLKVAACRKQQLIMVASRGDCDLCQHVVCKFGGRCEAGRCI
CPSECPETREPVCASNGETYINECEMQKAACGIENGLRVTFVGECSEARTSGVKDDPGLV
RPRDSSPPPMVGPPAPAHPLGHEEADVCASMTCEYGSTCTVLADGLPRCSCRLDCSNVPQ
NPVCASDLKMYSSECLMIREGCQRQVELRLRPLELCEDFELTPCDGSPPLINPATGRDYY
CGKGPDTETCPDGYYCHWTLSFAKCCPLDQAENGTLLGPPCRQESFGCCPDGKTAALGPN
YAGCPSICQCHKLGAHDEICDPMTNQCRCKPGVGGTKCDRCEPGFWGLPRIQLGSTGCLP
CGCSLFGSVRDDCEQMTGQCVCKPGITGKKCNICPEGLVLGPKGCKSPAITTPPPRTCAD
LECYFGARCQEHSGHAECKCDAQCPDDSSSARPVCGSDAETYASECHLRLFACHYQKDVV
VDALGPCPIPGNQSDGVTESPLRRSTAPLSTEPHREETAKATRHLLFPEYVIGSGSGSST
HSLSNSIFSVPPTPVTIAQFGLLGSVCYKDKDCSVPYSRCKTSICTCRIGFTQSADRQTC
VVTTPGREEVLSACSHQPCERGGTCRELPEGGYVCQCPHMATGDRCENELPPPYETPSFS
GSSFLEIKKIKAYNKVQIELEFRTFTDSGILLYSQQEQDGSGDFISLALVDGFVEFRYNL
GSGPAVIRSHERVQMKSFHRVVANRYQRDGKLQLDSSEDAVGKAPGNLKSLDLRGSTYIG
YVPTTERRVWENVGTSEGLVGCLKSVRINGRPLDLVWPGSPHILRAEHITECSTSPCATL
PCLNQGSCRPTDSGQFKCLCIQGYTGERCEVRLDPCESQPCQAGATCVSLPSEGFLCKCP
PGRTGTLCDQMDRTLREVVIPDFDGDSYLELPTLENVGRSFALEIWFLTRSPDGVLLYNG
QMGGGNDFIALNLRNGHIEFTYNLGSGLASLVSPDLVTLNTWHVVRVRRKKRRGILQLDR
GRKIRGKSGPRLTELNLNLPLYLGGLENYTMAHQDSGVVMGLNGAIQRLLVNSEVLDNLD
ERARGARGVKRYRGPPCLRNPCHNGGVCQPFLSRFLCKCPATYTGKFCEKHINENEMMKP
VKFDGKTFLKFPNMVYRINLTHYNLTAEEYEDYDFPEPWTELDLSYPTDYDLEDDVAFLE
EEEDYEEENNVAKTETLDEEVGRLEEETGEQETGSGILSLYEDDEIMTVLEEQVYYSGLE
TMMEDDTLVEEERLDNSINRVTEGEELDGKRGQTTNQFKVRFRATSSDGLLVWLNKRSTI
IGDYLALTINGGYVELSFNLGKQQTLLIIRSKVRVDDGQWHTLVAHRRKRLGVLRVDNER
PVKGVAEEGATTLNTNGKLWIGGSPNVPDGLPHAYYQGFRGCIDSVQVENRELNLVTHGD
SQQVRFCDEMR
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgtctacgcggcctacgggcccgtgcccacctcggtgggcgtgacagcttcc
cccagactcaatggctccctcgacagacgaatcattgtgcagggtcggtcggccaccctc
ggccgcaccaaccccggggctgccacccgccacgtgcatcaccacggggccatgggcatc
ggcagctcctaccaggacctgcggcggtccagggaatgcctggacatcaagcagatcccc
atggaagtgatgcagcccctggagcccctcggcatcggcgacggcaaactgcacggctcc
atcgaagccttcccgacgttgcccatcacgacgctggagagacgccgcaacggcggcttg
gtcaccggcggctgcagcgtccacgggggcaccctcagcagagtgggcagcagggccggc
tcaaggtaccagctggccgacgacaggcgggtttcgggagggggaagggggggatgctgc
aggaagagctgctgtaccctcaccctttccctcatcgcctgcttactgatactggggggc
gtcattgtcgccctctacttcttcatcaaaaatgtgccatacgaacatcagcccccaaca
caggaaaatttcaatttgtggagaaactttccagttcgcaatccgtgccacggccgcaag
tgccaccacggcgccctttgcgtcctcacgaacgacggacgcagcgctcggtgcgagtgc
cccatcgattgccaccagtacggcggaatgacggggcccggagcctccgacgggatgaac
gtggtctgcggctctgacgggaagaactacgatagcgagtgccaactcaggcgccacgcc
tgcaggacccagaaacacctcgaagtgcggtttccggggaaatgcgatccctgtgaagac
atttcgtgtcccgagcgccaaatttgccagctggatcgagacagactgcccgtctgccgt
tgcaacgacgtgtgtgccaaggactacgacgcggtgtgcgcgtcggacggcaaaacttac
acgaacgagtgtgtgatgaaattggaggcgtgtagggccaggaagacgctgtggatcatc
tacaatggggaatgtgatttagggctgaacccgtgcgacgccatatcgtgcatggcgggc
gaggagtgcaacgtggacaagaagggcattgccagatgcgagtgccccatgccctgcgag
aaagtgatgcgcccgtgtgcggaaacggacggggagacgtacgacaacctttgcgaactc
cagaggtcggtctgcgtcaaccaggtggacatcgatgttagctacaacggagtctgcgga
gaggaaggcccttgcgctggccacgaatgcggccacggggggctatgcgtcgacaggcag
ggtctgccggtgtgcgaatgcccgcagtgcccaccgcagctagatcccgtgtgcggcacc
gatggcatctcctacgacaacgaatgccacctgagggcagaggcctgtaggatacatcga
aacctgacagtcagatacaggggcaaatgcagtggctgcgaggataagcaatgcaatttc
tacgggatctgtgaggccgacgaaaaaggggtgggtcggtgtgtttgtcccgagggatgc
gtcaaggccgaaagcaaagtttgtggaacggacggagaaacttacttaaacgaatgtctc
ctcaaagttgccgcttgtaggaaacagcagcttatcatggtagcgtccaggggcgactgc
gacttatgtcaacatgttgtgtgcaagttcggcggccgctgcgaagccggaaggtgcata
tgtcccagtgaatgtccggagactcgggaaccggtgtgcgcttccaacggcgagacctac
atcaacgagtgcgagatgcagaaggcagcctgcggcatcgagaacggtctcagagtaact
tttgtcggggagtgttcggaggcgagaacgtccggcgtcaaggatgacccaggacttgta
aggccacgtgactcctcccctcctcccatggtgggtcctccggcgccagcgcatcctctg
gggcacgaggaagccgacgtgtgcgcctccatgacttgtgagtacggatccacgtgcacg
gtgttggcggacggcctgccccggtgctcgtgccgcctagactgctccaacgtgcctcag
aatcccgtctgtgcctctgacctcaagatgtactccagcgagtgcctcatgatcagggaa
ggatgccagcgccaagtcgagctcaggctgaggcccctggaactgtgtgaagacttcgaa
ttgacaccctgcgacggcagtccgcccttaatcaacccagcaactggtcgcgattattat
tgcggcaaaggacccgacacagagacgtgccccgatggctattactgccactggacattg
tcctttgcaaagtgttgtccccttgatcaagcggaaaatggaacactgttaggcccgccg
tgtcgacaggagtcttttggttgctgtccagatggcaaaactgcagctcttggtccaaat
tatgcaggttgcccgtcaatctgtcagtgtcacaagcttggtgctcatgatgaaatctgc
gacccaatgacaaatcagtgtcgttgcaagcccggtgtaggaggcactaaatgtgataga
tgtgaaccaggtttttggggtctgccaagaattcagctgggtagcactgggtgtcttcca
tgtggatgttccttgttcggttctgtgcgagatgactgcgagcagatgactggccaatgc
gtctgcaagccggggatcacgggcaaaaagtgcaacatctgccccgagggcctcgttctg
ggccctaaaggctgcaagtccccagcgatcacgaccccgcccccgcgcacttgcgctgac
ctcgaatgctactttggcgccagatgccaagagcacagtggccatgctgaatgcaagtgc
gatgcccagtgccccgatgactcatcctcggcaaggcctgtatgtggttcggatgctgag
acctatgccagtgagtgccatttgcgactctttgcctgccattaccagaaagatgttgtg
gttgatgcacttggtccttgccctataccaggcaaccagtcggatggagtgacagaatcc
cctctgcgccggtcgacggcacctctctcgacggagcctcaccgggaagaaactgctaaa
gcaacgagacatctgctctttccggagtatgtcattggaagcggcagtggctccagcacc
cacagtctctccaacagcatcttcagcgtgcctcccacacccgtgactattgcacagttc
ggactccttggttcagtatgttacaaggacaaagattgttctgtgccctattcgcgttgc
aagacctccatctgcacctgccgaattgggttcactcagagtgccgatcgccagacttgc
gttgttaccactccaggacgagaggaagtgttgagtgcttgtagccaccagccttgtgag
agaggcggcacctgccgagagcttcctgaaggagggtatgtttgccagtgccctcacatg
gcaactggtgaccgatgtgagaatgaactgccaccgccttatgaaactccctcttttagt
ggctcctccttcctggaaattaagaaaataaaggcttacaataaagttcagattgagcta
gaattcagaacatttactgacagcggaatacttctgtacagtcagcaagagcaggatggc
tctggggactttatctctctagctttagtagatggatttgttgagttcaggtacaactta
ggctcaggacctgctgtaataaggagtcacgagagagttcagatgaagagcttccatagg
gttgtagccaaccgataccagcgtgatggaaaattgcagctggattcgtcagaggatgct
gtcgggaaagctccagggaatctaaagagtttagatttgagaggctctacttatattgga
tatgtccccacaactgaaagaagagtgtgggaaaatgttggaacaagtgaaggactcgtt
ggctgtctgaagtcagtgcgcatcaatggacgtcctctcgatcttgtgtggcctggttca
cctcatatcttaagggcagaacatattactgaatgctctacctccccatgtgctacactt
ccatgcttgaatcagggatcatgtaggccaacagacagtgggcagtttaagtgcctgtgt
attcaagggtacactggagaacgttgcgaggtgaggttggatccatgtgaaagccaacca
tgccaagctggtgccacttgtgtctctcttccttctgagggctttctttgcaaatgtccg
ccaggtagaacaggaacactgtgtgaccagatggacagaactctcagagaagttgtgatt
cccgactttgatggagattcctacctcgaacttccaacactggaaaatgttgggaggtct
tttgcccttgaaatctggtttctaactagatctccagatggtgttttgctatacaatggg
caaatggggggtggaaatgatttcattgccctcaatcttcgtaatggacacatcgaattc
acttacaatcttggatcaggactcgccagtcttgtgagtccagatctagttacgctgaac
acatggcatgtagtgcgagtcagaaggaagaagaggcgtggtatacttcagctcgacaga
ggaagaaaaatccgggggaaaagtggcccaagactgacagaactcaacctcaacctgcct
ctttaccttggtggtttagagaactacacgatggctcatcaagactctggagtagttatg
ggtttaaatggtgctattcaaagattgctcgtcaactctgaggtcttagacaatctggat
gaacgtgctaggggtgcacgaggtgtgaagagatatcgaggcccaccatgcttaagaaac
ccatgccataatggtggtgtgtgccaacctttcctcagccggtttttgtgcaaatgtcca
gcaacttacactggcaaattctgtgaaaaacatataaatgaaaatgaaatgatgaaacca
gtcaagtttgatgggaaaacattcctaaagttccctaacatggtatacagaataaacttg
acccactacaacctaacagcagaggaatatgaagattatgatttcccggaaccatggaca
gaactcgatctttcctatccaactgactatgaccttgaagatgatgttgccttcctagag
gaagaagaagattatgaagaagaaaataatgtagccaagacagaaacacttgatgaggaa
gtaggaagactagaagaagaaacaggagagcaagaaactggttcaggaatactatcttta
tatgaagatgatgaaataatgactgttttggaggaacaggtttactatagtggtttggaa
acaatgatggaagatgatactttggttgaggaagaacggttagataacagcattaacaga
gtaaccgagggggaagagttagacggaaaaagaggccaaacaacaaatcagttcaaggtt
cgcttcagggcaacaagctctgatggtttgttagtgtggttaaacaaacgttccacaatc
atcggtgattacttggccttaactattaatggtggttatgtagaactttctttcaatctc
ggaaaacaacaaacacttcttataatcagatcaaaggtgcgggtagatgatggtcagtgg
cacacactagtagctcaccgaaggaaacgtttaggcgttctcagggtggataatgaaaga
ccagtcaaaggagtggctgaagaaggtgctactaccttaaatacaaatggtaaactttgg
attggaggctcgcctaatgttcctgatgggttgcctcatgcctactaccaaggttttcgt
ggctgcattgattctgtccaagtagagaaccgggaattaaatcttgtgactcatggtgat
tcacaacaggtcagattttgtgatgaaatgcggtga
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