Macrobrachium nipponense (oriental river prawn): 135209983
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Entry
135209983 CDS
T09903
Name
(RefSeq) regulator of nonsense transcripts 3B-like
KO
K14328
regulator of nonsense transcripts 3
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03013
Nucleocytoplasmic transport
mnz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135209983
03015 mRNA surveillance pathway
135209983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135209983
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
135209983
mRNA cycle factors
P-body specific factors
135209983
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
135209983
NCBI-ProteinID:
XP_064098776
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All DBs
Position
39:204462..212472
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AA seq
633 aa
AA seq
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MASYKNTQKNTKMKSKFYSDTSSRKSSEKPKKEKSLALVTKVVVRRLPPSMTEEMFIESV
SPLAEHDYFAFINADSSLGSSAYSRAYINFKNVEDVYIFYDKFDGYVFVDHKGNEHPAMV
EYAPFQKIPKRSGGKKKDARCGTIDEDADYLAFLESLTKPVTITLPPLEAVLEEIQAHDR
ELKANNGLIKVKTPLLEYIEQRKAEKLRSKEEKKEERRRKELERKKAREEERKKKKEIRE
HHKEMKKEQQKDDNSVLRPERGKDDYVSEGRQERSKADRDKERQKREEERLKIRKEKEKL
RREREKEERLRRLEDKAKHREEEKLKHKDDVLEEAQEEKVLASKPEGSKSKRYSEGRRKE
REKDKVKEEKERERKPKEEQDDVEIETLEENMNLENTPEKEEIDSSRKEEKSEEKVPSRK
RREKDPRVERRIRNKDRPAMALYRPGQSRLSSRMRQDREEGAETSSSSPSPVMPAGDQKK
LPSSRKENTDSSRSDCKEESTKTISITDDISESKSTTEISQDDRSSGEGTGEKATGNQKH
SNDEDEEDDDDDDDDDGENDENEENISDIKEGKDEKDSQMQEPLEDADLVDEAHSSSDST
HNKAEDSLGSISKDVKKYPGVKSMTFRRSVSRE
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttacaaaaatacgcagaaaaataccaaaatgaagagtaagttttatagtgac
acgtcgagccgtaagagctccgagaagcccaaaaaggaaaagtccctggcgttagtaaca
aaggtcgttgttcggcgtcttccaccaagcatgacagaagaaatgtttatcgagtccgtg
tcgccacttgcagaacatgattattttgcttttattaatgcagatagcagtcttgggtcc
agtgcttatagtagagcttacatcaacttcaagaatgtagaagatgtttatatattttat
gacaagttcgatggttatgtttttgtagatcataagggaaatgaacatccggccatggtg
gagtatgcaccttttcaaaaaattcccaaaagatctggtgggaagaaaaaagatgctaga
tgcggtaccatcgatgaagatgctgactaccttgcatttctggagtccttgacaaaacct
gtaactatcacacttcctcctctcgaagctgttcttgaagaaatacaagcacatgacagg
gaactgaaagcaaacaatggtttgattaaagtgaaaactcctctgcttgaatacattgag
caaaggaaggcggaaaagcttcgcagtaaagaagagaagaaagaagagaggagaagaaaa
gaacttgagcgcaagaaggccagagaggaagagaggaagaagaagaaggaaataagggaa
catcataaggagatgaagaaagaacaacagaaagatgataactctgttttacgaccagaa
cgaggcaaagatgattatgtctcagagggacgccaggagaggtcaaaagctgatagagac
aaagaaaggcaaaaacgagaagaggagaggctgaaaatacgaaaagaaaaagagaaactt
cgacgtgaaagagagaaagaggaaaggttacgaagattggaggacaaagcaaaacataga
gaagaggagaaattgaaacataaagatgacgtcttagaagaagcacaggaagaaaaagtg
cttgcaagtaaacctgaagggtcaaaatcaaagcgttatagtgagggtagaagaaaagag
agagaaaaggataaagtaaaagaagagaaagagagggaaaggaaacccaaggaagaacaa
gatgatgttgaaattgaaactttagaggaaaatatgaatttggaaaacacaccagaaaaa
gaggaaattgattcttcaaggaaagaggaaaaatctgaggagaaggttccgtccaggaaa
agaagagaaaaagatccgagagtagaaaggagaatacgaaataaagatcgaccagcaatg
gctctctatcgaccaggtcagtcacgtcttagcagccgcatgcgtcaagatcgtgaggaa
ggagcagaaacctcttcatctagtccaagccctgtgatgcccgctggggaccaaaagaaa
ttaccttcttcaaggaaggaaaatacagattccagtagatctgactgtaaagaggaatca
acaaaaactataagtattaccgatgatatatctgagagtaaatccactactgaaataagt
caggatgacagaagcagtggtgaaggtacaggggagaaggctactggaaaccaaaagcac
tccaatgatgaagatgaagaagatgatgatgatgatgatgatgatgatggtgaaaatgat
gaaaatgaagaaaacatatcagatattaaagaaggaaaagatgaaaaagacagtcaaatg
caggagccacttgaggatgctgaccttgttgatgaggcccattcttcttcagatagcacg
cacaataaggcggaagatagtttaggaagcatttccaaagacgtaaaaaagtaccctggg
gttaaaagcatgacatttaggagaagtgttagccgagagtga
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