Macrobrachium nipponense (oriental river prawn): 135218256
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Entry
135218256 CDS
T09903
Name
(RefSeq) superkiller complex protein 3-like
KO
K12600
superkiller protein 3
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135218256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnz03019
]
135218256
Messenger RNA biogenesis [BR:
mnz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
135218256
BRITE hierarchy
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_17
TPR_8
TPR_16
TPR_12
TPR_11
TPR_6
TPR_9
FAT
TPR_10
MIT
ATP_sub_h
LXG
Motif
Other DBs
NCBI-GeneID:
135218256
NCBI-ProteinID:
XP_064110497
LinkDB
All DBs
Position
9:complement(13194352..13239155)
Genome browser
AA seq
1344 aa
AA seq
DB search
MAEVKAALKDAKKAMKDNDFESVMKHCKIVLKHDRKNYNGLVIFGRACQELGKPDDSKKA
LMLATQVDPESPVAWQGLKKLCDEHPDIATKEELFTILSRLKDIIQDDDDKLDGIYRKLA
TIQLDNNESVAASVTLRELVTKLKAQRKVNEAWKSIVQILSGIKDLSPEDIPKLQEALEN
VLNESVLGDNEGNYQSYLHLLYRTRQMLKLVSAAKAMLAIFPTYFPLEWLCRTFVEMTAN
PAEGDGEYPLDREEVEKYASKLLSLNKASPWGNLAQGLLYLQDKQLPEARAHFRVGAERV
TNNLLGWKLLLGANEASNNWPGVEVACKKSLDIMASNAKVAIPGNEEFESYRWRMKLTRA
KAFVYMGHDNHLREAVSILEEQADEDLDSGLLLVRSLIKLKEFALAEKKLNSLKSLHKGQ
PQLMLLSAILLKEQGDTPGAQQVLEQFVQENPSVGEGHLELGCIYYETGNLAKAHICCMR
AGKLDPSLGRAFLYLGHFFRYQDNMEKALKCYEKAMNINPCDDDTGAALSDMYRIMGKHE
ENIALLRKITNEVGRTSCAWAWLRLGLHHYVLHELTESILAFQYALTINPNDGAGYECLG
DALLARGAYSAALKVFQHAATLRPDALYPLCQIAHIKQILGENLEAIVDYETVLTKSPMP
AVEVVSLLGLAETLLASARKYYEQYFHINVKQSCLRAISLLMRAASIKPSCSSAWKLIGD
ACTLLYPMPPSLSQFSIPSKLMQREVDDLNATVTVDKLQILQLGARCYGLSLQITKDDSN
LWHDLGINTYLQGIVMEETNKEGNEDVIKDLFLRSIKSLKKSVELEPTSAKAYNSLGVVA
AHKVVGEYALAQHAFLKSIDLQPTAIAWTHLGALYLTHKDVHLAHEAFSQAQASDPSFVT
CWVGQALVAESIDHSDFYDLFRHTTVLGIQVESCLGYGHHVTRIACDDSTLKNMRMTQVV
EHSLPGATDSLVYYTREKETDVIALNMAGLTLEMMKLYQSAVKSYQMALNVIGQGEEPEI
VKLRDGVYCNLGRALTGLGEVEEAMKYYAAIKEPDYFAHCGLALASLKAGKFEEAYNGYT
SALHWLAPDDTQKSHILVALASLQYKFQNPDEAKKLLFQGSQLRGASVHGLLALAALGLI
SMDAVLTNAALAELTPYEHDPKYLDHIAFLRAAEATSNGNLRSAKLILSRIIHQHPASAP
LWRSLAQHLLTVPKAPGQVYISKAATNCASAATKLSQVAGDTKIIAQDAVTSVIAALGTS
TTKASDNDKRKTSLRQAQRAVLMCPGSAEAWAVLIAAKMASNENQIKDDVAQLAEIWSTK
ASSRVSSWLHAVAAGKNLDRGVPI
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagttaaagctgctctcaaggatgccaagaaggctatgaaagataatgacttt
gaatcagtaatgaagcattgtaagatcgtcctgaagcatgatcgaaagaattacaatgga
cttgtcatttttggaagagcttgccaggaacttgggaaaccagatgattcaaagaaagct
ttgatgttagcaacacaagttgatccagaaagtccagtggcttggcaaggactcaagaag
ctttgcgatgaacatccagatattgctaccaaagaagagcttttcacaatattatcacgg
ctcaaagatattattcaagatgatgatgataaacttgatggcatttatcgcaaattagca
acaatacagctggacaacaatgaatctgttgcggcttcagttaccttaagagaacttgtg
accaaactgaaagctcagaggaaggttaatgaggcatggaagagtatagtgcagattctt
tcagggataaaagatttgtctccagaggacatcccaaagttgcaagaggcattggaaaat
gtccttaatgaatctgtattgggagataatgagggtaattaccaaagttatttacacttg
ctctatcgcacccgacaaatgttgaagttggtgtctgctgcgaaggcaatgttagccatc
ttccctacttatttcccattggagtggttgtgccgaacctttgtggaaatgactgccaac
ccagcggaaggagatggagagtaccctctggatcgtgaagaagttgagaagtatgcttca
aaactccttagccttaacaaagcttctccatggggtaatctagctcaaggtctcctctat
ctgcaagataaacagttaccagaagctcgggcacatttcagagttggtgcagaacgtgtt
acaaacaatcttttggggtggaagttgctgttaggtgcaaatgaagcctcaaataattgg
ccaggtgtagaggttgcatgtaagaagtcactagacatcatggcctctaatgcaaaggtt
gccattcctggtaatgaagagtttgagtcttatagatggaggatgaaattaactcgtgcc
aaggcatttgtttatatgggtcatgacaaccatttaagagaagctgtctcaattcttgag
gagcaagctgatgaagaccttgacagcgggcttctgctggttaggtcacttatcaaattg
aaggaatttgccttggctgagaagaaactgaattccctaaagtcattgcataagggtcag
ccacaattgatgcttttatcagctatccttctaaaggaacagggagacactccaggagca
cagcaagttttggagcagtttgtacaggagaacccatcagtaggcgaagggcatctggag
cttggttgcatctattatgaaacaggaaatttggcaaaggctcacatttgttgcatgaga
gctggcaagttggatccaagtcttggacgggctttcttgtatctgggccacttcttccgc
taccaggacaacatggagaaggccctcaagtgttatgaaaaggctatgaatataaatccc
tgtgatgatgacactggtgctgccctgtctgacatgtataggataatgggaaaacatgaa
gaaaatattgctctgttgcgcaagataacaaatgaagtgggcagaacatcgtgtgcatgg
gcttggctacgccttggccttcatcattatgtcttgcatgaactgacggagtccatatta
gcatttcagtatgctctcactattaacccaaatgatggggcaggatatgagtgccttgga
gatgcccttcttgccagaggtgcttactcagctgccctaaaagtgttccagcatgcagcc
actcttcgaccagatgccctctaccccctctgtcaaatagctcatattaaacagatttta
ggagaaaaccttgaagcaattgtagattatgaaactgtgctgactaaaagccctatgcca
gcagtagaagtggtctcgttgcttggcttagccgagacactcttagcaagcgcccgcaag
tattacgaacaatacttccatattaacgtcaaacagtcatgcttaagggccatttcattg
ctgatgagggctgcaagcattaaacccagctgttcatctgcatggaagttgattggagat
gcttgtacactgctttaccctatgccaccatcactttcacagttttccatcccttcaaaa
ctcatgcagcgggaagtagacgatcttaatgcgacagtcactgttgataagcttcagatt
cttcaattaggagcaaggtgttatggcctctccttgcaaataaccaaagatgactctaat
ttgtggcatgatctgggtataaacacttatttgcaaggcattgttatggaggagaccaac
aaagaagggaatgaagatgtcatcaaggacctctttctgcgttcaatcaagtctttgaag
aagtcagttgaacttgagccaaccagtgctaaggcttacaattctctgggtgttgttgct
gcccataaagttgttggagagtatgcactagcacaacatgcctttctgaagtctattgac
ctgcaaccaactgccattgcctggactcacttaggggcattgtacttaacccataaagat
gttcatttggcacatgaagcattttcacaggcccaagcaagtgatccttcatttgtcaca
tgctgggttggacaggcacttgtagcagagagcatcgaccactctgacttctatgatctt
ttccgtcatacaactgtacttggcattcaggttgagagctgcttgggctatggtcatcat
gttactcggatagcatgtgatgatagcaccctaaaaaatatgagaatgactcaagttgtc
gagcactctcttccaggggccactgactctctagtttattataccagagaaaaagagaca
gacgtaattgcccttaacatggcaggcttgactctggagatgatgaagctttaccagtca
gctgttaaatcttaccagatggcattaaacgtcattggccaaggggaggagcctgaaatt
gtcaagcttcgcgatggagtgtactgcaatctaggaagggcacttactggattgggtgag
gtggaagaggcaatgaaatattatgcagcaatcaaggaaccggactattttgcacactgt
ggccttgcacttgcaagtttgaaagctggtaaatttgaagaagcatacaatggatacacc
tctgccctccactggcttgcccctgatgacacccagaaatcacatatactggtagcactg
gcatctttgcaatacaagttccagaacccagatgaagcaaagaagctcctgttccaagga
tctcaattacgtggagcatcagttcatgggcttctggcactggcagcactaggtcttatc
tctatggatgcagtgctcacaaatgcagccttggcagaactcaccccatatgaacatgac
ccaaaatacttagatcatattgcatttttgagggctgcagaagcaacctctaatggtaac
ctgagaagtgcgaagctcattctcagtagaattattcaccagcatccagcaagtgctcca
ttgtggagatctctcgctcagcacctcctcacagtgccaaaggctcctggacaagtatat
attagtaaggctgctacaaattgtgcatctgctgcaacaaagttatctcaagtggccggg
gatacaaagatcattgcacaagatgctgtaacaagtgttattgcagccctgggaactagt
acaaccaaggcatctgataatgacaagaggaaaaccagcttacgtcaggcacagagagct
gttcttatgtgcccaggttccgctgaagcttgggctgttctcattgcagcaaagatggca
tctaatgaaaatcagattaaagacgatgttgcccagcttgctgaaatttggtccacaaaa
gcatcgtcgcgtgtatcttcgtggctgcatgcagttgcagctggtaaaaatctggataga
ggtgttcctatataa
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