Malania oleifera: 131149372
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Entry
131149372 CDS
T09312
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
mof
Malania oleifera
Pathway
mof03022
Basal transcription factors
mof03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
131149372
09124 Replication and repair
03420 Nucleotide excision repair
131149372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mof03021
]
131149372
03400 DNA repair and recombination proteins [BR:
mof03400
]
131149372
Transcription machinery [BR:
mof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
131149372
DNA repair and recombination proteins [BR:
mof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
131149372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
Tfb4
Motif
Other DBs
NCBI-GeneID:
131149372
NCBI-ProteinID:
XP_057955750
LinkDB
All DBs
Position
2:complement(24012138..24042567)
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AA seq
429 aa
AA seq
DB search
MNNIEYQKTNNGEGRRLDEEAGEEEEDEDEANGQGLDAWERAYADERSWESLQEDESGLL
CPVDNKTLFHAQYRRRLRSLSSTATAARIQKGLIRYLYIVIDLSRAAAEMDFRPSRMVVV
AKHVEAFIREFFDQNPLSQIGLVTIKDGVAHLLTDLGGSPDSHVRALMGKLECSGDSSLQ
NALDLVHGYLNQIPSYGHREVLILYSALSTCDPGDIMESILRCKKSKIRCSIIGLSAEIF
ICKHLCQETGGSYSVALDESHFKELLLEYAPPPPAIAEFAIASLIKMGFPQRAAEGVISI
CSCHKEAKTGGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFPITLFDDVSP
LLLNNPQNRLPRSCFGCQQSLANPGNKPSLCVACPKCKQNFCLDCDIYIHESLHNCPGCE
SFRHTKTQQ
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacatcgaatatcaaaagacgaacaacggtgaaggaagacgattggatgaagaa
gcaggagaagaagaggaagatgaagatgaggcaaatgggcaaggtcttgatgcatgggag
agggcttatgcagatgagagatcatgggagtccttgcaagaagatgagtctggactgctt
tgccctgttgacaacaagaccctcttccatgctcagtatcgtcggcgtctccgctccctc
tcctccactgcaactgctgctcgaattcaaaagggccttattcgctatctctatatagtt
attgatctctcaagggcagcagcggagatggatttccgtccaagccgaatggttgtggtt
gctaaacatgtggaggctttcattagggaattctttgaccagaatccacttagccagatt
ggccttgtaactataaaagatggtgttgcccatttattaacagatcttggtggcagtcct
gattcccatgttagagctttgatgggtaagttagagtgctccggtgattcctctctgcaa
aatgctttggatctcgttcatgggtatctaaatcaaataccatcttatggtcaccgtgaa
gttttaatattgtattcggctctcagtacatgtgatccaggggatataatggagagcatt
ctgaggtgcaaaaaatctaaaataaggtgctctattattgggctctcagcagagattttt
atttgcaaacatctttgccaagaaactggtggatcatactctgttgcattggatgagtcc
cattttaaagagttattgctggagtatgcacctccacctcctgcgatagcggaatttgca
atcgctagtttgataaagatgggatttccacagagagcagcagagggtgttatctcaata
tgctcttgtcataaagaggccaagactgggggaggctacacctgcccaagatgcaaagca
cgtgtgtgcgagctacccacagagtgccgaatttgtggactgacacttgtttcttccccc
catttggcaaggtcgtatcatcatctcttccctataacactctttgatgacgtatctccg
ttgctgttaaataatccacaaaataggttaccaagaagctgctttggttgccagcaaagt
cttgcgaaccctggaaataaaccaagcctttgtgtggcctgtccaaaatgcaaacagaac
ttctgccttgattgtgacatttatattcacgagagcttgcacaactgccctggctgcgaa
agcttcaggcatacaaagacacaacagtga
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