KEGG   Methanobrevibacter olleyae: YLM1_0121
Entry
YLM1_0121         CDS       T04385                                 
Name
(GenBank) ATP-dependent DNA ligase DnlI
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mol  Methanobrevibacter olleyae
Pathway
mol03030  DNA replication
mol03410  Base excision repair
mol03420  Nucleotide excision repair
mol03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    YLM1_0121
   03410 Base excision repair
    YLM1_0121
   03420 Nucleotide excision repair
    YLM1_0121
   03430 Mismatch repair
    YLM1_0121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mol03032]
    YLM1_0121
   03400 DNA repair and recombination proteins [BR:mol03400]
    YLM1_0121
Enzymes [BR:mol01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     YLM1_0121
    6.5.1.6  DNA ligase (ATP or NAD+)
     YLM1_0121
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     YLM1_0121
DNA replication proteins [BR:mol03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    YLM1_0121
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     YLM1_0121
DNA repair and recombination proteins [BR:mol03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     YLM1_0121
   NER (nucleotide excision repair)
    Other NER factors
     YLM1_0121
   MMR (mismatch excision repair)
    Other MMR factors
     YLM1_0121
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: AMK14681
UniProt: A0A126QXB9
LinkDB
Position
149496..151148
AA seq 550 aa
MKYGELVKVYEALGATTKRLEKRDILADFLKTVDVEDLEKITLMALGRVFPSWSEDEQGI
GDKLIMRAVGDVVGVSVELVEDAVRDEGDIGAAAEKLYAKKTQMTFFSQALTVNFVYNQL
RKLSTISGSRSTTRKISNILELLSSASAIEAKYICRTILEELRIGVGEGIIRDAISLAFD
IDKAVAERAHMLTNDLGLVAKVAKEEGEEGLKKLTLIPGRPVKPMLAQLSEAIDISIEEM
GCALCETKYDGFRTQFHKNGDEITLFTRRLENVTLAFPDAVELIREGLPDEDFIAEGEII
GFKNGKPQPFQSVLQRVRRKYDIKETMKNVPIKIFLYDLLYFKEPTVDEPIIKRREILES
IVDSSNPELNLSDIVKVSPENIGDAVDLFNKSIEGGHEGIMIKNCAEPYIPGIRGKKMLK
FKAEPETLDAVVVGGVKGIGKRGDFIGSYEIALRDENDQLQTITHVGTGLSDDDLANLTK
KMEELKITEKGTRITVHPKIIFEIAYSEIVKSPEYSAGYSLRFPVVKRIRTDKGLEDIDT
VERLESMFNG
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgaaatatggggaacttgttaaagtttacgaggcattaggtgcaactacaaaaagatta
gaaaaaagagatattttagcagattttcttaaaactgttgatgttgaagatttagaaaag
attactttaatggctttagggcgtgtttttccttcttggagtgaagatgaacagggtatt
ggtgataagctaatcatgagggctgttggagatgttgtaggagtatcggtagaattagtt
gaagatgctgttcgtgatgaaggggatattggagctgctgcagagaaattatacgctaaa
aagactcaaatgacatttttttcacaagctttaactgttaactttgtttataatcaacta
agaaaattaagcacaatatctggaagtagatctactactcgtaaaatttctaatattctt
gagcttttgtcctctgcttcagcaattgaagctaaatatatttgcagaactattttagaa
gagcttagaattggtgtaggggaaggaattattcgtgatgcaatatcccttgcctttgat
attgataaagcagttgctgagcgagctcatatgttaacaaatgatttaggtcttgttgca
aaagtagcaaaggaagaaggtgaagagggacttaaaaaattaacattgattcctggtagg
ccagtaaaaccaatgcttgcacagttatctgaagctattgatataagtattgaagaaatg
ggatgtgcactttgtgagacaaaatatgatgggttccgtactcagttccataagaatggt
gatgaaattactttatttactcgtcgcttagaaaatgttacattggcatttcctgatgca
gttgaattaattagggaagggcttccagatgaagattttattgcagagggggaaattata
ggttttaaaaatggtaaacctcagccattccaaagtgtattacaaagggttagaagaaaa
tatgatattaaagaaactatgaaaaatgtacctataaaaatctttttatatgatttgctt
tactttaaagagccaacagttgatgagccaattataaaacgtagagaaatcttggagagt
attgtagattcctcaaatccagaactaaatcttagtgatattgttaaagtaagccctgag
aatataggggatgcagtagatttatttaataaatcaattgaagggggacatgaaggaata
atgattaaaaactgtgcagaaccatatattccgggaattcgtggcaaaaagatgttgaaa
tttaaagcagaacctgaaacattagatgctgttgttgttggaggagtgaaaggaattggt
aaaaggggagatttcataggttcttatgaaatagctcttcgtgatgaaaatgaccagtta
caaactattactcatgtaggaacaggcctttctgatgatgacttagcaaatcttactaaa
aagatggaagagcttaaaatcactgagaagggaactcgtataactgttcatccaaaaatt
atttttgaaattgcatatagtgagattgtaaaaagcccagaatactcagctggttactct
ttacgcttcccagttgtaaaaagaatcagaacagacaaaggattagaagatattgataca
gttgaaagattagaatcaatgtttaatggctaa

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