Moritella sp. 36: HWV03_02945
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Entry
HWV03_02945 CDS
T08847
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
moq
Moritella sp. 36
Pathway
moq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
moq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HWV03_02945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
moq03019
]
HWV03_02945
03009 Ribosome biogenesis [BR:
moq03009
]
HWV03_02945
Enzymes [BR:
moq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HWV03_02945
Messenger RNA biogenesis [BR:
moq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HWV03_02945
Ribosome biogenesis [BR:
moq03009
]
Prokaryotic type
rRNA helicases
HWV03_02945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
AAA_22
UTP25
Motif
Other DBs
NCBI-ProteinID:
QUM87847
LinkDB
All DBs
Position
631340..633196
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AA seq
618 aa
AA seq
DB search
MSDTSPVQFTDLNLPEPILKALNDLGYETPSPIQAECIPLLQDGGDVLGMAQTGTGKTAA
FALPLLSRVDTSLTKPQILVLAPTRELAIQVAEAFQAYSRHMRGFHVLPIYGGQSYPIQL
KALKRNPQVIVGTPGRVIDHINRGTLDLSGIKALVLDEADEMLRMGFIDDVESILSKTPE
KRQMALFSATMPEEIRRITKRFMTEPKSVKIAAKTSTVENIEQKCLIIGGLQAKLDGLTR
ILETEDYDGVIIFARTKTMTVELAEKLEARGYSAAALNGDLNQAMRERTVSRLKNGQLDI
VIATDVAARGLDVPRIDLVVNYDIPTDTESYVHRIGRTGRAGRKGTAILFAAPRERRLLK
AIERATRQPLTMMDLPSRDDVTKKRIASFRDQLSTLSSSEENLDFYKNLVGQLSEELELS
ELDLASALLFMAQKEKPLVLPPEAPRRERSFRDDDRGDRGRDRNDRGDRRDRGDRPERGD
RPERRPAAEMEVFRIEVGRADGVQVKNIVGAIANEANINSRNIGGIRLHDDYSTIELPKG
MPSEQLQQLQQVYVCNKALRMSKLEGVAAEGRQERSRPPRDNDRPARDGHRGQRRDSNGG
ERRESNGGERRPRRPRRD
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatacatcacccgtacaatttactgatttaaatttacctgaaccaattttaaaa
gcgttgaatgatctaggttatgaaacaccttcaccaattcaagctgaatgtattccgtta
ctacaggatggtggtgatgtgctaggtatggcacagactggtacgggtaaaacagctgcg
tttgcattaccattattgagtcgtgttgatacgtcactgactaaaccacagatattggta
ttagcaccaactcgtgagttagcgattcaagttgctgaagcattccaagcatactcacgt
catatgcgtggattccatgtgctacctatctacggtggtcaaagctacccgattcagtta
aaagcactgaaacgcaacccacaagtgattgttggtactcctggccgtgtgatagatcac
attaaccgtggtacgcttgatctttctggtattaaagcactagtacttgatgaagcagat
gaaatgctacgcatgggctttattgatgatgtagaatcaattctgtctaaaacacctgag
aagcgtcaaatggcgttattctctgcaactatgcctgaagaaattcgtcgtattacgaaa
cgttttatgactgaaccaaaatcagttaaaattgcagctaaaacatcaactgttgaaaac
attgaacaaaaatgtttaatcattggtggtttacaagcaaaacttgacggcctaacacgt
attcttgaaactgaagactacgatggtgtgatcatctttgctcgtactaagacaatgact
gttgaacttgctgagaaattagaagctcgcggttactctgctgcggcactaaacggtgat
ttaaaccaagcaatgcgtgagcgcactgtaagccgtttgaaaaatggccaattagatatc
gtaatcgcgactgatgttgctgcacgtggtcttgacgttcctcgtattgacctagtagtt
aactacgatatcccaacggatacagaatcatacgttcaccgtattggtcgtacaggccgt
gctggacgtaaaggtactgcaatcctatttgctgcaccacgcgaacgtcgtttattaaaa
gcgatcgaacgtgctacacgtcagccattaactatgatggatctaccttcacgtgatgat
gtgacgaaaaaacgtattgcatcattccgtgatcagttatctacactttcttctagtgaa
gaaaacctagatttctacaaaaacttagttggtcaactttctgaagagttagaactaagc
gaattagatcttgcatctgcgttattattcatggctcagaaagaaaaaccattagtatta
ccaccagaagcaccgcgtcgtgaacgtagcttccgtgatgatgaccgtggtgatcgtggc
cgtgatcgcaacgaccgtggcgaccgccgtgatcgtggtgaccgtcctgaacgtggtgac
cgtcctgaacgtcgtccagctgcagaaatggaagttttccgtattgaagttggtcgtgca
gatggtgttcaagttaagaatattgttggcgctattgctaatgaagcgaatatcaacagc
cgtaacatcggtggtatccgtctacatgatgactactcaacaattgaattaccaaaaggt
atgccaagcgagcagttacaacaactacaacaagtttatgtttgtaacaaagcattacgc
atgagcaaacttgaaggtgttgcagctgaaggtcgtcaagaacgtagccgtccaccacgt
gataacgatcgtcctgcacgtgatggtcatcgtggccaacgccgtgattctaacggtggc
gaacgtcgtgagtctaacggtggtgaacgtcgtccacgtcgtccacgtcgtgactaa
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