Methylobacterium oryzae: MOC_5434 Help Entry MOC_5434          CDS       T03299                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism mor  Methylobacterium oryzae Pathway mor03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:mor00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     MOC_5434  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:mor03400]     MOC_5434 Enzymes [BR:mor01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      MOC_5434 DNA repair and recombination proteins [BR:mor03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      MOC_5434 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol DNA_ligase_A_C DNA_primase_S DNA_ligase_A_M Motif Other DBs NCBI-ProteinID:  AIQ93189 UniProt:  A0A089QF04 LinkDB All DBs Position 5455672..5457027 Genome browser AA seq 451 aa AA seqDB search MARHACRLGLEGIVAKHAASPYRSGRTDHWRKIKCTWSEEFVVAGYMPSTTATRSVGSLI LGTHEDGILVHVGRVGTGFRGKVARDLWTELEPLRIPAPPFKAAIPPLACRNARWVEPRL VCEVTFRGWTAEDQLRHASFKTLRADVRPDEVVREMKPTRPNVRPGKSSEVAVALTHPDR VLWPDVGLTKEGLAEYYAEIADHVLPHVIDRPLSLLRCPDGLGSCIYQKHAWAGLDERYI RSVDGKKAVVIRDREGLRALVQASVLKIHPWGATASDPDRPDRLVFDLDPGEGVGWGDLV AGALEVRERLSASGFATFVKTTGGKGLHVVVPIEPGAGWDEAKAFTKRIASEMAKDAPDR YVATVSKKARDGRIYVDYLRNQRGATAVAAFSTRARPLAPVSVPVDWDELPSLGSGACFD VASVPGRLAALKRDPWAGFERAARPLLATGG NT seq 1356 nt NT seq  +upstreamnt  +downstreamnt atggcgcgccacgcctgcaggctcggtctggaaggcatcgtcgccaagcatgcggcctcg ccctaccggtctggccggacggaccactggcgcaagatcaagtgcacctggtcggaggag ttcgtcgtcgcgggctacatgccttcgacgacggcgacccgatccgtcgggtcgttgatc ctcgggacgcacgaggacggcatcctcgtccacgtgggtcgggtgggcaccggcttccgc ggaaaggtcgcacgggatctctggaccgagttggagccgctacgcatcccggcgccgccg ttcaaggccgcgataccgccgctcgcgtgccgcaacgcccgctgggtagagccccggctc gtctgcgaggtgacctttcgcggttggacggccgaagaccagctgcggcatgcgtcgttc aagaccctccgtgccgacgtgcgtccggacgaggtcgtgcgggagatgaaaccgacgcgc ccgaacgtgcggccgggaaaatcctcggaggtggccgtggcgctgacgcatccggatcgc gtgctctggcccgacgtcggcctgaccaaggagggtctcgccgagtactatgcggaaatt gccgaccacgtcctgccgcacgtgatcgacagaccgctgtccctgctccgttgcccggac ggcctcggatcctgcatctaccagaagcacgcctgggccgggctcgacgagcggtacata cgatccgtggacggcaagaaggccgtcgtgatccgcgatcgcgaaggtcttcgcgccctg gtccaagcgagcgtcctcaagattcatccctggggggcgacggcatcggacccggatcgt ccggaccggctggtcttcgacctggatcccggcgaaggcgtcggatggggcgatctcgtc gccggcgcgctggaggtgcgcgagcggctgtccgcatcgggcttcgccaccttcgtgaag accaccggcggcaaggggctgcacgtggttgtgccgatcgagcccggagccggttgggac gaggcgaaggccttcacgaagcgcatcgcatccgagatggcgaaggacgcgcccgatcgt tatgtcgccaccgtgtcgaagaaggccagggacggtcgcatctacgtggactacctgcgc aaccaacggggcgcgaccgccgtcgcggccttctcgacgcgggcccgtcccttggcgccc gtatccgttcctgtcgattgggacgaactaccgtcgctcgggtccggcgcgtgcttcgat gtcgccagcgtgccggggcggctcgcggcgctgaagcgcgatccatgggccgggttcgag cgcgcggcgcgccctctgttggcgaccggtgggtga

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