KEGG   Marasmius oreades (fairy-ring mushroom): E1B28_001063
Entry
E1B28_001063      CDS       T08156                                 
Name
(RefSeq) uncharacterized protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
more  Marasmius oreades (fairy-ring mushroom)
Pathway
more03030  DNA replication
more03410  Base excision repair
more03420  Nucleotide excision repair
more03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:more00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    E1B28_001063
   03410 Base excision repair
    E1B28_001063
   03420 Nucleotide excision repair
    E1B28_001063
   03430 Mismatch repair
    E1B28_001063
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:more03032]
    E1B28_001063
   03400 DNA repair and recombination proteins [BR:more03400]
    E1B28_001063
Enzymes [BR:more01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     E1B28_001063
    6.5.1.6  DNA ligase (ATP or NAD+)
     E1B28_001063
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     E1B28_001063
DNA replication proteins [BR:more03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    E1B28_001063
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     E1B28_001063
DNA repair and recombination proteins [BR:more03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     E1B28_001063
   NER (nucleotide excision repair)
    Other NER factors
     E1B28_001063
   MMR (mismatch excision repair)
    Other MMR factors
     E1B28_001063
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 66070139
NCBI-ProteinID: XP_043015666
LinkDB
Position
1:3186607..3189977
AA seq 820 aa
MERQQTLGQFFEMPKPDPPQQSTLKEMWVKKHKESKVPKEVEETRRAADEHENTREMSES
SKRRHPEVPETSNAPKQKKRKVVYSDDEDTSPATTTESSKTKPSSQTSKLKSPRGKNAVS
SAEHDEKDDGATDAVSTGSGDGEKGHDEDELVEDEDEEMVASGGAAASKTALAALSKINE
VDVKGGWKVSEPVPYAALAKTFSIIEATTKRLEKNALLTSLLLLVIQRSTKKDHTSLLQT
VYLCINRLSPDYIGIELGIGESLLIKAIAESTGRSLAVVKADLKKEGDLGLVALNSKNSQ
KTLYKPKPLTIPFVFSKLKEIALSTGHSSQAKKVGIITKLLAACQNFEAKYIVRSLEGKL
RIGNAERSVLVALAHAAVLAEKESSGKKWSNEKLAVRLEEGADILKSIYSELPSYDEVIP
ALLEHGIDGLREHCKLRPGVPLKPMLAKPTKAIGEVLDRFENKRFTCEYKYDGERAQIHK
LEDGTLRVFSRNSEDMSKKYPDLVEQIPHCIKDSTKSFVLDSEAVAIDRTTGRLLPFQEL
SRRKRKDVKVEDIQVRVCLFTFDLLYLNGESLLHNSLNERRKLLREHFQPVDREFQFAKS
SESEATEDIQAFLEESVRDGCEGLMVKMLDTDASYYEPSRRSVNWLKLKKDYLAGVGDSL
DLVVIGAFYGKGKRTNVYGAFLLACYDGDSEEFQSICKVATGLSDEALQTHYEMLKPLEI
QNPRGDVKIGGAKADVWLEPQVVWEVLTADLSLSPIYTAAQGLVGDRGISLRFPRFIRVR
DDKNAEDATGPEQIAEMYERQALAQSTGRKKKGDVNDDFW
NT seq 2463 nt   +upstreamnt  +downstreamnt
atggaaagacagcaaacactcggacaattcttcgaaatgcctaaaccggatcctccacaa
caatcgactctcaaagagatgtgggtaaagaaacacaaggaatcgaaggtgcccaaggaa
gtagaggaaacacgtagggcggcagatgagcacgagaatacgcgagagatgtctgagagt
tctaaacgtagacatccagaggtccctgaaacaagtaacgcccccaaacaaaagaaacga
aaggtggtatactccgatgacgaagatacatccccagccaccaccaccgagtcttccaaa
accaagccatcctctcagacatctaaactcaagtctccaagagggaaaaacgcagtatca
tctgccgaacacgatgaaaaagatgatggtgcaacggatgcagtatctactggcagtggt
gatggggaaaagggccatgatgaagatgaacttgttgaggatgaagatgaagaaatggtc
gcctcgggcggtgcggcagcatccaagactgctctcgcagctctctctaaaataaatgaa
gtcgacgtcaagggcggatggaaagtttcagaaccagttccctatgccgctctcgcgaaa
actttttcaataatagaagccacaacgaaacgactggagaagaatgcattgctcacatca
ttattattgcttgtgattcaacgaagcaccaagaaggatcatacctctctccttcagacc
gtttatctatgtatcaatcgtctgagcccggattacatcggaatcgagcttggtataggg
gaaagtcttctcatcaaagccattgccgaatccacaggaaggagtctggctgttgtcaaa
gcggatctgaagaaagaaggggatcttgggctcgtcgcattgaactcgaaaaatagccag
aagacgttatacaagccaaaacctctaacgattccattcgtgttttcgaaattgaaagag
atcgcacttagtaccggtcattcttcacaggcgaagaaggtcggaataatcacaaaactg
ttagctgcttgccagaatttcgaagccaagtatatcgtccgtagcttggagggcaaactc
aggataggcaatgcggagagatctgttctcgtcgcacttgcacacgctgcagtcctcgca
gagaaagagagctcgggtaagaaatggagcaacgaaaagctcgccgtgcggttggaagaa
ggcgctgatatcttgaagtcaatctatagtgaattgcccagttacgatgaggttatccca
gcactcttagaacatggaatagatggcctacgcgagcattgcaagctgagaccgggagtc
ccgttgaaaccgatgttggctaaacctacgaaagcaattggtgaagtgctcgatagattc
gagaacaagcggtttacttgtgaatacaaatacgacggagaacgtgcgcagattcacaaa
ctcgaagatggcacgttacgtgtttttagcaggaattctgaagacatgagcaagaaatat
cctgacctcgtggagcaaattcctcattgcatcaaggattccacgaagtcatttgttctg
gactcagaagccgttgcaatagatcgcacaacaggcagactactgccattccaagaattg
agtagaagaaagcgtaaagacgtcaaggttgaggatattcaagtccgggtctgtctcttt
actttcgaccttttgtatttgaatggtgaatcgctcttgcacaattcactgaacgagaga
agaaaactattacgtgagcacttccaaccggttgatcgcgaattccaattcgcaaaatcg
tccgaaagcgaagcaacggaggatatacaagcgtttctcgaagagagtgtcagggacgga
tgtgaaggtctaatggtcaaaatgcttgatactgatgccagctattatgaacctagtaga
cgtagtgtcaactggctgaagctcaaaaaagattacctggcgggcgtgggtgactcgcta
gatcttgttgttatcggagcgttctacggaaagggcaaacgaacgaatgtgtacggcgct
ttcctgttggcatgttatgacggcgattcggaagagtttcaatcgatctgcaaggtcgcg
acaggtcttagtgatgaagccttgcaaacgcactacgagatgctcaagccgttagaaatt
caaaatcctagaggcgatgtcaagattggaggtgccaaagcggatgtctggcttgagcct
caggttgtctgggaggtcttgacggcagacctgagtttgagcccaatttacacggcagcg
cagggattggtgggagaccgaggaatatctctccggtttcctcgcttcatccgggtgcga
gatgacaaaaacgcagaggatgctactggccccgaacagatagcggaaatgtatgaacgg
caggcgctcgcacagagtactgggagaaagaagaagggagatgtcaacgatgacttttgg
tga

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