Microtus oregoni (creeping vole): 121442437
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Entry
121442437 CDS
T08307
Symbol
Dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
121442437 (Dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
morg04054
]
121442437 (Dhx58)
Enzymes [BR:
morg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
121442437 (Dhx58)
Pattern recognition receptors [BR:
morg04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
121442437 (Dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
SWI2_SNF2
Terminase_6N
Motif
Other DBs
NCBI-GeneID:
121442437
NCBI-ProteinID:
XP_041499937
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MELRPYQWEVILPALEGRNIIIWLPTGAGKTRAAAFVARRHLETVDRGKVVVLVNRVHLV
SQHAEEFRSMLDKRWTMTTLSGDMGPRAGFGLMARSHDLLICTAELLQLALVSPEDEEHV
ELTEFSLIVVDECHHTHKNTVYNVILSRYLEHKLQKAERLPQVLGLTASPGTGRATNLQG
AIDHILQLCANLDTWRIMSPENCRPQLLEHNPKPCKQYDLCQRRREDPFGDLLKELMKQI
HQQLAMPELSQQFGTQTYEQQVVELSKAAAEAGLQQRRVYALHLRRYNDALLTHDTVRAQ
DALDMLQDFYHRERATKTQMLRAERWLLELFDGHKNELAQLAARGPENPKLEMLEGILLK
QFGSPNHPRGIIFTRTRQSAYSLLLWLWQQPGLQKVNIKAQMLIGAGNSSQSTHMTQKNQ
QEVIQEFRDGTLNLLIATSVAEEGLDIAQCNVVVRYGLQTNEISMVQARGRARAGQSVYS
FVATEGSRELQRELTNEALEVLMEQAVAAVQKMDPQEFKAKIQDLQRAALVKRAVRAAQR
ESQQRQFPAECVQLLCINCMVAVGYGSDLRKVEGTHHVNVNPNFSIYYTVSQKPVVINKV
FKDWKPGGTISCSNCGEVWGLQMIYKSVTLPVLKIRGILLETPHGRIQAKKWSRVPFSIP
DFDILQYCAQNLSDLSLN
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcggccctaccagtgggaagtgatcttgcctgctctggaaggcaggaatatc
ataatctggttgcccacgggcgctggcaagacccgggcagctgcttttgtggccaggcgg
catctagagacagtagacagaggcaaggtggtggtgctggtcaacagggtacacttggtg
agccagcatgctgaggaattcaggagcatgttggataaacgctggaccatgactaccctg
agtggagacatgggaccacgagctggctttggcctaatggcccggagccatgacctgctc
atctgcacagcagagctcttgcagctggcgctggtcagcccagaagacgaggaacacgta
gagctcacagagttctcactgatcgtggtggacgagtgtcaccacacccacaagaatacg
gtctacaacgtcattctgagccgctacttagaacacaagctgcagaaggcagagcgcctt
ccccaggtgctggggctcacggcctccccaggcaccggcagggccaccaacctccaaggg
gccattgaccacatcctacagctctgtgccaacctggatacgtggcgcatcatgtcacca
gagaattgccgcccccagctgctggagcacaacccgaagccctgcaagcagtacgacctc
tgccaaaggcgcagagaggacccttttggagacttgctaaaagagcttatgaaacaaatt
caccagcaactagcgatgcctgaactgagccagcagtttggaacgcagacttacgagcag
caagtagtggagctgagcaaagctgccgcagaggcaggactccagcaacggcgggtgtat
gcgctccacctgcggcgctacaatgacgcgctgttgacccacgacaccgtccgcgcacag
gatgctcttgacatgttgcaagatttctaccacagggagcgcgccacgaaaactcagatg
ctgcgtgcggagcgctggctgctggagctgttcgatggccataagaatgagctggcccag
ttagcagctcgtgggcccgagaatccgaagttggagatgctggaagggatcctgctgaag
caatttgggagccccaaccaccctcggggcatcatcttcacccgaacccgccagagtgct
tactccctcctgctctggctttggcagcagcctggcctacagaaagtgaacatcaaggcc
cagatgctgattggagcagggaatagcagccagagcacacacatgacccagaaaaaccag
caagaggtaatccaggagttcagggatggtaccctgaaccttctaattgctacaagtgtg
gcagaggaggggctggatatcgcccagtgcaatgtggtggtacgctatgggctccagacc
aatgagatctccatggtccaggccaggggccgcgctcgagctgggcagagcgtgtactcc
tttgtggcaacagagggcagtagggagctgcagcgggagctgaccaatgaagctctggag
gtgctgatggagcaggccgtggctgcagtgcagaagatggacccccaagagttcaaggcc
aagatccaggacctgcaacgggcagctctggttaagcgagcagtgcgcgcagcccagcgg
gagagtcagcagaggcagttcccagcggagtgcgtgcagctcctctgcatcaactgcatg
gtggccgtgggctacggaagtgacctgcggaaggtggagggcacccaccacgtcaatgtg
aaccccaacttctcgatctactataccgtctcccagaagcctgtggtcattaacaaagtc
ttcaaggactggaagcctggagggaccattagctgcagtaactgtggggaggtctggggc
ttgcagatgatctacaaatcagtgaccttgccggtgctcaaaatccgaggcatactcctg
gagacccctcacgggaggatccaggccaagaagtggtcccgggtgcccttctcaatacct
gattttgacattctacagtactgcgcccagaacctgtctgatctctccctgaactga
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