KEGG   Microtus oregoni (creeping vole): 121453242
Entry
121453242         CDS       T08307                                 
Name
(RefSeq) THO complex subunit 1
  KO
K12878  THO complex subunit 1
Organism
morg  Microtus oregoni (creeping vole)
Pathway
morg03013  Nucleocytoplasmic transport
morg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:morg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121453242
  09122 Translation
   03013 Nucleocytoplasmic transport
    121453242
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:morg03019]
    121453242
   03041 Spliceosome [BR:morg03041]
    121453242
Messenger RNA biogenesis [BR:morg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     121453242
Spliceosome [BR:morg03041]
 Complex C
  Other components
   EJC/TREX
    121453242
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    121453242
SSDB
Motif
Pfam: efThoc1 Death bDLD3 HsdM_N
Other DBs
NCBI-GeneID: 121453242
NCBI-ProteinID: XP_041515712
LinkDB
Position
Unknown
AA seq 657 aa
MSPTPALFSLPEARTRFTKSTREALNNRNIKPLLNAFSQLPGSENEKKCTLDQAFRGVLE
EEIINHSACENVLAIISLAIGGVTESVCTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHTEEREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERASDTKPTRVVRKRAAPE
DFLGKGPNKKILIGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ESEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRQDKPITGEQIELFANKLGEQWKILAPYLEIKDSEMR
QIESDSEDMKMRAKQLLVAWQDQEGAHATTDNLISALNKSGLSDLAESLTNDTETNS
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgtctccgacgccggcgcttttcagtttgcccgaggcgcggacgcggtttacgaaatct
accagagaggccttgaataacagaaatatcaagccattgttgaatgccttcagtcagtta
cctggcagtgaaaatgaaaaaaaatgtacccttgaccaggctttcagaggtgttctggaa
gaagaaattataaatcattcggcatgtgagaacgttttagctattatttctcttgccatt
gggggagtaactgaaagtgtctgtactgcgtccacaccatttgtgctgttgggagacgtc
ttggactgccttcctttggatcagtgtgacacaatattcacttttgtcgaaaaaaatgtt
gctacttggaagtcaaatacattctattctgctggcaaaaattatttactgcgtatgtgc
aatgatctcctcagaagattatcgaaatctcagaatacagtcttttgtggacgaattcag
ctctttttggccaggctttttcctctatctgaaaaatcaggtcttaacttacagagtcag
tttaacctggaaaatgttactgttttcaatacaaatgagcaggaaagcaccctgggtcag
aagcatactgaggagagagaggaaggcatggatgtagaagaaggtgagatgggagatgat
gaagccccaacaacatgctctattccaattgattacaacctatatagaaaattctggtca
cttcaggattacttcaggaacccagtacaatgctatgagaagatttcttggaaaactttt
ctcaagtattctgaagaagttttagctgtgtttaagagttataaattagatgatactcaa
gcctccaggaaaaaaatggaagaattgaaaacaggaggagagcatgtgtactttgcgaag
tttctaacaagtgaaaagttgatggatttacaactgagtgacagtaactttcggcgacac
atcctgttgcagtacctcattttatttcaatatctcaagggacaggtcaaattcaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtc
taccaactgctatctgaaaacccccccgatggagaaagattttcaaagatggtagagcat
atattaaatactgaagaaaattggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagagcatcagacaccaagcccacaagagtggtgcggaagagagcagccccagaa
gacttcttaggcaaagggcccaacaagaaaatcctgattggcaatgaagagctaacaagg
ctttggaacctctgtcctgataatatggaagcctgtaaatcagagacaagagaatacatg
ccaactttggaggagttctttgaagaagccattgaacaagcagatcctgaaaatatggtt
gaaagtgaatataaagctgtgaacaattcaaattacgggtggagagcactcagactctta
gcacggagaagccctcacttcttccagccaaccaaccagcagtttaagagtctcccagag
taccttgagaacatggtaataaagctagccaaagaactaccacctccttctgaagaaata
aaaacaggtgaagatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagt
cccgatgttcggcaagataaacctataacaggggaacagatagagttatttgctaacaaa
cttggtgagcaatggaagattttggctccttacttggaaattaaagactctgaaatgagg
cagattgagagtgacagtgaagacatgaagatgagggccaagcagctccttgttgcatgg
caagatcaagaaggagctcatgcaacaacggataatctgattagcgcactaaacaagtct
ggattaagtgaccttgcagaaagtctaactaatgacactgagacaaatagttag

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