Microtus oregoni (creeping vole): 121453277
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Entry
121453277 CDS
T08307
Symbol
Ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121453277 (Ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
morg03041
]
121453277 (Ddx46)
Enzymes [BR:
morg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121453277 (Ddx46)
Spliceosome [BR:
morg03041
]
Complex A
U2 snRNP components
U2 related factors
121453277 (Ddx46)
Complex B
121453277 (Ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
FAM176
Motif
Other DBs
NCBI-GeneID:
121453277
NCBI-ProteinID:
XP_041515825
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGSKSKKAENRSRS
KEKAEGGDSSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGAGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQ
LAEKINAKLNYVPLEKQEEERQEGGQSESFKRYEEELEINDFPQTARWKVTSKEALQRIS
EYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNS
YQPTNKGRYKVL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtctcgccactaccgcaaacgctcggcatcacgaggacggtctggaagt
cggtctcggagtcgttcaccctctgacaaaagaagtaaacgtggagatgacagacgctct
aggagtagagatagagacaggaggagagagaggtctcgcagcagggacaaaagaagatca
cggtccagggacaggaagcgcctgaggcgctccagaagtagagagcgagacagaagccga
gagcgaagaagatctcggagccgagataggaggcgctcaaggagtagaagccggggccgg
cgatcccggtcctccagtcctggcagcaaaagcaagaaggctgagaataggtctagatcc
aaagagaaagcagaaggtggggacagttctaaagagaagaaaaaggacaaagacgacaag
gaagatgagaaggagaaggatgctgggaactttgaccagaataagctggaggaagaaatg
agaaaacgaaaagaaagagttgaaaaatggcgagaagagcagcgtaaaaaggccatggaa
aacataggggaattgaagaaggaaatcgaggaaatgaaacaagggaaaaagtggagttta
gaagatgatgatgatgatgaagatgatcctgcagaggctgaaaaggaagggaatgaaatg
gagggcgaggagttagatccattagatgcctacatggaggaagtgaaagaagaagtgaag
aagtttaacatgaggagtgtgaaaggcggtgcgggcaatgagaagaagtctggaccaacc
gtcaccaaagtggttactgtggtaacaaccaaaaaagcagtagtggattctgataagaag
aagggagagctgatggagaatgaccaggatgccatggagtattcttcagaggaggaggaa
gttgatcttcagacagccttgacaggctaccagacaaaacagagaaaacttctagaacca
gttgatcatggaaaaattgagtatgaaccattcagaaaaaatttttatgttgaagttcca
gaactagcaaaaatgtctcaggaggaggtgaatgtgtttcgattggaaatggagggcatt
acagttaaaggaaaaggttgtcccaaaccaattaagtcgtgggtccagtgtggaatttcc
atgaagatactaaactccctcaaaaagcatggctatgagaagcccacaccaatccaaact
caagcaattcctgctataatgtctggacgagatttaattggcattgccaagacaggaagt
ggaaaaaccattgcctttcttttgcccatgtttagacacatcatggatcagagatcttta
gaagaaggagagggcccaatagctgtcatcatgactccaactcgagaactggctttacag
atcactaaagaatgtaagaagttttcgaagaccttgggactcagagtggtctgtgtgtac
ggagggacaggaatcagcgagcagatcgctgagctgaaaagaggtgctgagattattgtt
tgcacacctggtcgaatgattgacatgttagctgctaacagtggtcgagtcacaaatctc
cgaagagtgacatatgttgttttagatgaagcagacagaatgtttgacatggggtttgaa
ccacaggtcatgcgcattgtggataatgttcgtcctgaccgacagacagttatgttttca
gctactttccctagagctatggaggctttggcccgcaggatcctgagcaagcccattgaa
gttcaggttgggggcaggagtgtggtttgctcagatgtggaacaacaagtgattgtgatt
gaagaagaaaagaaattcttgaaattactcgagcttttaggccattatcaggagtcggga
tctgtcattatatttgttgacaagcaggagcatgccgatggtctcctgaaggacttgatg
agagcatcttacccctgcatgtctcttcacggcggtattgatcagtacgacagggacagc
atcataaatgactttaagaatggaacctgcaaacttctcgtagccacgtcagttgctgct
cgaggtctagatgtgaaacatttgattctggtagtaaattacagctgtcccaaccattat
gaagattatgtgcacagagctggacggactggaagggcaggcaacaaaggctatgcttac
actttcatcacagaagatcaagctcgctatgctggtgatataattaaagctcttgaattg
tcagggacagcagtgcctcctgacctggaaaagctctggagtgacttcaaagatcaacag
aaagcagaaggaaaaataattaaaaagagtagtggtttctctggcaagggattcaagttt
gatgaaacagaacaggcgttagccaatgagaggaagaagttacagaaagctgctcttggc
ctgcaagattcagatgatgaggacgctgcagttgatattgatgaacagattgagagcatg
tttaattcaaagaagagagtaaaagacatggctgcacctggcacatctagtgtgcctgcc
cccaccgcaggcaacgctgagaagctagagattgccaagaggctggctcttagaatcaac
gctcagaagaacctaggcatcgagtctcaggtagatgtaatgcagcaagccaccaatgcc
attctcagagggggcaccattctggctcccacagtgtcggcaaaaaccattgcagaacag
cttgctgaaaagatcaatgccaagctcaattacgtgcctttggagaaacaggaagaggag
aggcaggagggtgggcagagcgaatctttcaagagatacgaggaagagttagaaattaat
gacttcccacagacggcgaggtggaaagtcacctctaaggaagccctgcagagaatcagt
gagtactcggaagccgccatcaccatcagaggcacctacttccctcctggcaaagagccc
aaggaaggagaacggaaaatttacttggcgattgaaagtgccaacgagctggctgtgcag
aaagcaaaggcagaaatcaccaggctcataaaagaagaactgatccgactgcaaaattcg
taccaaccaacaaataaaggacgatacaaagtattataa
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integrated database retrieval system
