Microtus oregoni (creeping vole): 121460028
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Entry
121460028 CDS
T08307
Symbol
Chd6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
morg03036
]
121460028 (Chd6)
Chromosome and associated proteins [BR:
morg03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
121460028 (Chd6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
ResIII
DEAD
CHDCT2
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
121460028
NCBI-ProteinID:
XP_041526063
LinkDB
All DBs
Position
Unknown
AA seq
2710 aa
AA seq
DB search
MKMKIQKKEKQLSKLKSLSHSPMSDASVNFDYKSPSPFDCSTDQEEKIEDIANHCLSQKD
LYATEEEADTLFSRKLLSHNGMEDSGGRGTGVKKKRKKKDPGEQEGTKGSKDREPKPKRK
REPKEPKEPRRAKEPKRAKEPKEAKQKDGVKKPRKPREASGTKEAKEKRSCTDYVSRTKS
KKASKEQGPTVERKKKGKRKNETTVESLELDQSLPNSTLRSPEEPTESTDSQKRRSGRQV
KRRRYNEDLDFKVVDDDGETIAVLGAGRTSALSASTLAWQAEEPPEDDANIIEKILASKT
VQEVHPGEPPFDLELFYVKYRNFSYLHCKWATMEELEKDPRIAQKIKRFRNKQAQMKHIF
TEPDEDLFNPDYIEIDRILEVAHTKDAETGEEVTHYLVKWCSLPYEESTWELEEDVDPAK
VKEFESLQVLPEVKHVERPASDAWQKLETSREYKNSNRLREYQLEGMNWLLFNWYNRKNC
ILADEMGLGKTIQSITFLSEIFVRGIHGPFLIIAPLSTITNWEREFRTWTEMNAIVYHGS
QISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILADCPELKKIHWSCVIIDEAHR
LKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETAFLEEFGDL
KTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFL
TKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDFRKAHSSEASDFQLQAMIQAA
GKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI
DRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV
KVYRLITRNSYEREMFDKASLKLGLDKAILQDINRKGSTNGVQQLSKMEVEDLLRKGAYG
ALMDEEDEGSKFCEEDIDQILQRRTHTITIQSEGKGSTFAKASFVASGNRTDISLDDPNF
WQKWAKIAELDTEANNEKESLVIDRPRVRKQTKHYNSFEEDELMEFSELDSDSDERPTRS
RRLNDKARRYLRAECFRVEKNLLIFGWGRWKDILTHGRFKWHLNEKDMEMICRALLVYCV
KHYKGDEKIKSFIWELITPSKDGQAQTLQNHSGLSAPVPRGRKGKKTKNQLLLPELKNAD
WLATCNPEVVLHDDGYKKHLKQHCNKVLLRVRMLYFLKAEILGEAADKAFEGTPARELDV
PLPDIDYVEIPVDWWDAEADKSLLIGVFKHGYERYNAMRADPALCFLEKVGMPDEKSLSA
EQGVTDGTPDIPERGNIDKEDSAEDKLDGLQKQTASPSDGSDGIFGEKKDDSQAAQDGSN
PDKSPWPVSSALTARLRRLVTIYQRCNRKELCRPEILGPGNQGYWVQEDVFRRTSEMDLI
NKEAQKRWTRREQADFYRTVSSFGVVYDQEKKAFDWTQFRIISRLDKKSDESLEHYFYSF
VAMCRNVCRLPTWKDDGSSDANIYVEPITEERAAKTLYRIELLRKVREQVLRCPQLHERL
QLCRPSLYLPVWWECGKHDRDLLIGTAKHGLNRTDYYIMNDPQLSFLDAYRNYAQHKRTD
SQAPGSLCCLYQNNSKLYESLTYSQMRRTSESLESEPENLVKMENRDDHLCLPEGSLSDI
TCENFISKVQEVISIDHDESLLPESLESMMYGKTGLSREPLSFQETPSTNTQSRKDVVTV
SASRDESCQPAGIEAEIASNSLMSSLEAGVAKMNIKNGKHLLISISKEGEPCCSETGQRP
EGTGHLEAKCLSPTLDTGHESGFVDLCSLSVCDSRRKMSSDQQLIDLLENKSLESKLILS
QNQSDEEEEENEDETLAIVASTTEKPEGLHFTRPSANIPRGKNLCFHQDEAKKGSLEVVS
QTPGPQRAFPPSASQCHCKHMERWAHGLGSEESEVEKLKAYQPDLYRSKANNTTVEGEPA
IIPTEPFKLKHELLKEPWKESAEGGKSFSMYVPEGIEPKPEDMDFENKDDYEKDGTCHSQ
DYPGKYSEEESKSSTSGIAGDLGEEAQEVRAPTIAQLLQEKTLYSFSEWPKDRVIINRLD
NICHVVLKGKWPSSQQYEPSGALPTPILNSSAGFRNSLSEPEAAEHGFSSGAALAAQIQK
ESFLAPVFTKDEQKHRRPYEFEVERDAKARSLEQYSATHGRPPIVLNGWHGESAIDLSCS
SEGSPGATSPFPVNTSTPKIGAIGSLQGALGMDLSGILQAGLIHPVTGQIVNGSLRRDDA
AMRRRRGRRKHIEGGMDLIFLKEQTLQAGILEVHEDSGQTTLSTTHPEGPGAASSAPEPA
AANDQTEKAVPSKSLLDWLRQQADYSLDVPGFGASFSDKPKQRRPRCKEPGKLDIPSLSG
EERVSAVPKEPGLRGFLPESKFNHTLAEPVLRDAGPRRRGRRPRTELLKAPAIVADSPSG
MGPLFMNGLIAGMDLVGLQNVRNIPGIPLTGLVGFPAGFATMPTGEEVKSTLSMLPMMLP
GMAAVPQMFGVGGLLNTPMTTTCTTTASASLSSTTKSGTSATEKTTEDKLSGREVKADTL
VEDKSGPGPFSDQSEPTITTSSPVAFNPFLIPGVSPGLIYPSMFLSPGMGMALPAMQQGR
HSEMVSPESQKRKKKKTKGDNANPEPASGCEREPDSDQNCTESSTTLPPQREHMAQAGEG
GLKDSSDDTN
NT seq
8133 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaaatacagaagaaagagaagcagttgtccaagttaaaatctttgagtcac
tccccaatgtcagatgcctctgttaattttgattacaaatcaccatcaccatttgactgc
agcactgatcaggaagagaaaatcgaagatattgccaatcactgtctgtcccagaaggac
ctttatgctactgaagaagaagctgatacccttttctctaggaagttgttatcccataat
gggatggaggatagtggaggcagaggtactggagtgaagaagaaacggaagaaaaaggat
ccaggagagcaagagggaacaaagggaagcaaggacagggagcccaagccaaagagaaaa
cgagaacctaaagagccaaaagaacccaggagggccaaggagccgaagagggccaaggag
cccaaggaggcaaagcagaaggatggtgtgaagaagccccggaagcctcgggaggcctcg
ggtaccaaggaggctaaagagaagaggagctgcactgactacgtatccaggacgaagtcc
aagaaggctagcaaggagcaaggaccaactgtggagagaaagaagaaaggaaaaaggaaa
aatgaaaccactgtggagagtttagagctggatcagagtttgccgaactcaaccctgcgg
agtcctgaggagcccaccgagtctacagacagtcagaaacggcgctcaggacgacaagta
aagcgcaggagatacaacgaggatcttgacttcaaagtggtggatgacgatggggaaaca
atcgctgtcctgggagctggccggacatctgcgctctctgcttctacgctggcctggcag
gcagaggagcctccagaagatgatgcaaacatcattgagaagatcctggcatctaagact
gtccaggaggttcacccaggagaacctccatttgacctggagctgttctacgttaagtat
agaaatttttcctatttacattgtaaatgggccacaatggaagagctggaaaaggatccc
cgcatcgcacagaagatcaagcgatttaggaacaaacaggcccagatgaagcacattttt
actgagcctgatgaagacttgttcaatccagactatatagaaattgaccgtatcttagag
gtggcccacaccaaggatgcagaaacaggggaggaagtgacacattacctggtgaaatgg
tgctccctaccttatgaagaaagcacatgggagctagaagaagatgtggatcctgcaaaa
gttaaagaatttgagtctctacaagttctccctgaagttaagcacgtggagcgacccgct
tctgatgcctggcagaagctggagacgtctcgtgagtataagaacagtaaccggctgcgg
gagtaccagctggagggaatgaactggcttcttttcaattggtacaacagaaaaaactgt
attttggcggatgaaatgggcctagggaaaaccatccagtccatcacattcctttcagaa
atattcgtcagaggaatccatggtccttttctcatcattgcccctctttccaccatcact
aattgggagcgagaattccggacgtggacggagatgaatgctattgtgtaccatggcagc
cagatcagcaggcagatgattcagcagtatgaaatggtgtacagggatgcacagggaaac
cccctttcaggagtcttcaagttccatgttgtcatcacaacatttgagatgatcctggca
gattgcccagagctgaagaagattcactggagctgtgtgataatcgatgaggcccacaga
ttgaagaacaggaactgcaagcttctggaggggctaaagctcatggccctggaacacaaa
gtgctgctcacaggaacacccttgcagaactctgtggaagaactcttcagtttgcttaac
tttctggagccctcgcagtttccttcagagactgctttcttagaggagtttggcgatctc
aaaacagaagagcaggtaaagaaattgcagtctatcttaaaaccaatgatgcttcggcgc
ctgaaagatgatgtggaaaagaaccttgctcccaagcaagaaaccatcatcgaagtagaa
ctgaccaatatccagaaaaagtattaccgtgccatcctggagaaaaacttttccttcctg
accaaaggcgcaaatcagcacaacatgcccaatcttatcaatactatgatggaactaaga
aaatgctgcaaccacccctacctgatcaatggggcagaggaaaagattctggaagatttc
cggaaagcccacagctctgaggcctctgacttccagctgcaggccatgatccaggcggcc
gggaagctggtgctgatcgacaagctgctccccaaactgattgcaggtggccacaaagtg
ctcatcttctctcagatggtgcgctgtctcgatatcctggaagattatctcatccagagg
agatacacctatgagcggattgatgggcgagtacgggggaacctgcgccaggcagccatc
gaccggttctgtaagccagactcagaccgctttgtttttcttctgtgcaccagagcagga
ggcctagggatcaatctcacagctgctgatacctgcatcatatttgattctgactggaac
ccacaaaatgacttgcaggctcaggcccggtgtcatcggataggccagagcaaagccgtg
aaggtgtatcgcctaatcactcgaaactcttatgagcgagaaatgtttgacaaggccagt
ctgaaactaggcctggacaaagctattcttcaggacatcaacagaaagggcagcaccaat
ggggtacagcagctctcaaaaatggaagtggaggacttacttcggaaaggtgcttatggg
gctttaatggatgaggaagatgaaggctccaagttctgtgaagaagatatagaccagatt
ctgcaaagaagaacccataccatcacaatccagtcggaggggaaagggtccactttcgcc
aaggctagttttgtggcttcaggaaacagaacagatatttccttggatgatcctaatttt
tggcagaaatgggctaaaatagccgaattagacactgaagcaaataatgaaaaggaaagc
ttagtgattgatcggccacgtgtgaggaagcagaccaagcactacaactcatttgaagag
gatgagcttatggagttctcagagctagacagtgactcagatgaaaggcccacacgatcc
aggcgcctcaatgacaaagccaggcgctacctccgtgccgagtgcttccgggtagagaag
aacctgctcatctttggctggggccggtggaaggacatcctgactcatgggcgatttaag
tggcacctgaatgagaaagacatggaaatgatttgccgggccctgttggtgtactgtgtc
aagcattataaaggagatgaaaagatcaagagttttatttgggagctaatcacaccttcc
aaagacggacaagctcagaccctccagaaccactcagggttgtctgcccctgtccccaga
gggaggaaaggaaaaaagacaaaaaaccagctcttgctcccagaactgaagaatgcagat
tggctagccacctgcaaccctgaggtggtcttacatgatgatggatacaagaaacacctc
aaacagcactgcaacaaggtgcttctgagagtccgaatgctatacttcctaaaagctgaa
atactgggagaagcagctgataaagcatttgagggaactcctgccagggaactggatgtg
cctctgcctgacattgactacgtggaaatccccgtggattggtgggatgctgaggctgat
aagtcccttctcattggcgtgttcaagcacggttatgagaggtacaatgccatgcgggct
gacccagcactctgcttcctagagaaagtcgggatgcctgatgagaagtccctgtctgca
gagcagggtgtcacagatggaaccccagacattcctgaaagaggcaacatagataaagaa
gacagtgctgaggacaagttagatggtctccagaagcaaacggcgagccccagtgatgga
agtgatggcatttttggtgaaaagaaggatgacagccaggcagcccaggatggctccaac
ccagacaaatcaccctggccagtttcatctgctctcactgctcgactccggcgtctggtt
actatttaccagcgctgcaatcgcaaggagctctgccgacctgaaattctaggcccaggt
aatcaaggatactgggttcaggaggacgtgttcaggagaacttcagaaatggacctcatc
aacaaggaagcccaaaaaaggtggactagaagagaacaagccgacttctatagaacagtg
tcttcctttggcgttgtgtatgaccaagaaaagaaagcctttgactggacacagttccgc
atcatctcccgtttggacaagaagtcagatgagagcctggagcactacttttatagtttt
gtagccatgtgccggaatgtgtgtcgtcttcccacatggaaagatgatggttcctctgat
gccaacatctatgttgaacccatcactgaggagcgggcagcaaaaactctgtaccgcatt
gaactgctgaggaaagtccgtgagcaagtgctcaggtgtccacagctacatgagcgcctc
cagctttgcaggcccagcctctacctcccagtctggtgggaatgtgggaaacatgatcga
gacctgctcatcggcactgccaaacatgggctcaaccgcactgactattacatcatgaac
gacccccagttatccttcctagatgcctacagaaactatgcccaacacaaaagaactgac
tcacaggcacctggaagtctctgttgcctttaccagaacaattctaaactatatgaatct
cttacttattcccaaatgaggaggacttcagagtccctggaaagtgagccagagaatctg
gtgaaaatggaaaacagggacgatcatctctgtctgcctgagggcagcttatctgacata
acttgtgaaaactttatttccaaagttcaggaggtcatttctatcgaccatgacgaaagc
ttgctgcccgagtccttggagagcatgatgtatggtaagacaggactcagccgagagcca
ctctcttttcaggagaccccaagtaccaacacacagtccaggaaagatgttgtcaccgtc
tcagccagcagagatgagagctgccaacctgctggcattgaggcagaaatcgcttcaaac
tctctaatgagcagcttagaagcaggagtagctaaaatgaacattaaaaatggaaaacat
ttgttgatctctatctcaaaagaaggggaaccctgctgcagtgagacaggacagagacct
gaaggcacgggccacctagaggccaaatgcttatcccctaccttagatacaggacacgaa
agtgggtttgtagatctgtgcagccttagcgtgtgtgactccagaagaaaaatgtcatca
gatcagcagttaattgacttattagaaaacaagagtctagaaagtaagttgattttgagt
cagaaccagagtgatgaggaagaggaagaaaatgaggatgaaactttagccatagtagca
agcaccacagaaaagccagagggcttgcatttcaccaggcccagtgcaaacatcccaagg
ggaaagaacctctgtttccaccaggatgaagccaagaaaggaagcctggaggtggtaagc
cagactcctggaccacagagggcctttcctccctcagccagtcagtgccactgcaaacac
atggaaaggtgggcacatggcctggggagtgaggagtctgaagtagagaaactcaaggct
tatcaaccagacctgtacagaagcaaggccaataatactacagtggaaggtgagcctgcc
attattccaacagagccatttaaactgaagcatgagcttttaaaagaaccctggaaagaa
agtgcagaggggggaaagagtttctccatgtatgttcctgagggaattgagcccaaacca
gaagacatggattttgagaataaagatgattatgagaaagatggaacctgccacagtcaa
gactacccaggaaaatactctgaggaagagagtaagagctcgacatcaggcattgcagga
gaccttggggaagaggcacaggaagtgcgggctcccaccattgctcagctgctgcaggag
aaaaccttgtattccttctcagaatggccaaaggatcgtgtgataattaaccgcttagat
aatatttgccatgtggtgttaaaggggaagtggccctccagccaacagtatgagccgtca
ggtgcactgcccacgccaattttaaacagcagtgcaggttttcgaaacagcctctcagag
ccagaagcagcagaacatggcttcagcagtggtgcagcattggcagcccagatccagaag
gagagcttcttagccccagtattcacaaaagatgaacaaaagcacagacgtccctatgag
tttgaggtggaaagggatgccaaagctcggagcctagaacaatactctgctacccatggg
cgtccccccattgtcctcaatggctggcatggggagtcagctatagacctctcctgctca
tcagaggggtccccaggagccacatcccctttcccagtgaacaccagcacccctaagatt
ggggctatcggttcacttcaaggagccctaggtatggacttgtctggaattctgcaagct
ggcctaatccacccagtaactggacagatcgtcaatggaagcctcaggagagatgatgct
gccatgagaaggcggagagggaggagaaaacatattgaaggaggaatggacctcatcttt
ttgaaggagcaaacacttcaggctggaattctggaagtccatgaagattcggggcagact
accctaagcactacacaccctgaagggccaggagctgcttcctcagctcctgagccagca
gcagccaacgaccagactgagaaagctgttcccagcaagagcctacttgactggctgcgg
caacaagctgactactccttggatgtccctggctttggggcaagtttttcagacaaaccc
aagcagaggagaccacgctgcaaagaacctggaaaattagacatcccctctctgagtgga
gaagaaagagtttctgctgtccccaaggagccaggactgagggggtttctcccagaaagc
aaattcaatcacaccctagctgagcctgtgcttcgagatgcaggcccccgcaggaggggg
aggcggcctcggactgaactcctaaaagctccagccattgtggcagactctccctctgga
atgggaccactgttcatgaatgggctgattgcagggatggacctggtaggattgcagaat
gtgagaaatattccaggcattcctctcactgggctggtgggcttcccagctggttttgct
accatgcctactggtgaagaggttaaaagcaccctgagcatgctacccatgatgctgcca
ggcatggctgcagtgccccagatgtttggtgttggtggacttctcaacacacccatgaca
accacctgtacgaccactgcatcggcatctctctcaagcacaacaaaaagtggtacctca
gccactgaaaaaactacagaggacaaactaagtggccgtgaagtaaaagcagacactctg
gttgaagataagtctggcccaggtccgttttctgatcagtctgaacccacaataactact
agtagtcctgtggctttcaacccatttctcatcccaggagtgtctcctgggctcatctac
ccatccatgtttctttcccctggcatgggcatggctctgccagccatgcagcagggcaga
cactcagagatggtcagccctgagagccagaagaggaaaaagaagaaaacaaagggggat
aacgccaacccagagcctgcatccgggtgtgagagggagccagacagtgatcagaactgc
accgagtcgagtaccactttgcctccacaaagagaacacatggcacaggctggggaaggg
gggctcaaagactccagtgatgataccaattag
DBGET
integrated database retrieval system
