Microtus oregoni (creeping vole): 121462422
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Entry
121462422 CDS
T08307
Symbol
Lig4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
morg
Microtus oregoni (creeping vole)
Pathway
morg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
121462422 (Lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
morg03400
]
121462422 (Lig4)
Enzymes [BR:
morg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
121462422 (Lig4)
DNA repair and recombination proteins [BR:
morg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
121462422 (Lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
HTH_Tnp_Tc3_2_like
ATG17_like
Motif
Other DBs
NCBI-GeneID:
121462422
NCBI-ProteinID:
XP_041529927
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MATSQSSQTVAAHVPFADLCSTLERIHKSKDRAEKIRHFKEFLDSWRKFHDALHKNKKDV
PDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGART
DAGDFAMIAYFVLKPRCLQKGSLTIQQVNELLDLVASNNSGKRKDLVKKSLLQLISQSSA
LEQKWLIRMIIKDLKLGVSQQTILNVFHNDAVELHNVTTDLQKVCQQLHDPSIGLSDISI
SLFSAFKPMLAAVADVERVEKDMKQQSFYIETKLDGERMQMHKDGEVYQYFSRNGYNYTD
QFGASPQEGSLTPFIHDAFRTDVQECILDGEMMAYNPTTQTFMQKGVKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGRETLRKRYEILSNTLTPIQGRIEIVQKKLAHTKNEVVDALNE
AIDNREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVTGLMDELDLLIVGGYWGKGSRGGMM
SHFLCAVAEAPPHGQRPSVFHSLCRVGSGYTMKELYDLGLKLAKHWKPYHKKSPPSSILC
GTEKPEVYIEPHHSVIVQIKAAEIVPSDMYKTGTTLRFPRIEKIRDDKEWHECMTLGDLE
ELRGRASGKLATKHLHVGDDDEPREKRRKPVSKMKKTIGIIEHLKAPNLSNVSKVSNVFE
DVEFCVMTGVEGYPKPDLENRIAELGGCVVQNPGPETYCVIAGCRNIRVRNIISSDEHDV
VKPEWLLECFKTKTCVPWQPRFMVHMCPSTKQHFAREYDCYGDSYFVDTDLDQLKEVFSG
IKPRERQTPEEMAPVIADLEYRYSWDHSPLSMFRHCTVYLDLYAVVNDLSSKIEATRLGV
TALELRFHGARVVSCLSEGVSHVIVGEDPSRVADFKAFRRTLKKKFKILQEHWVTDSVDK
CELQDESRYLL
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctacctcacagtcttcacaaaccgtcgcagctcatgtcccctttgcagatttatgt
tccacattggagcggatacataaaagtaaagaccgtgcagagaagatcaggcactttaag
gaatttttagattcttggaggaaatttcacgatgcccttcataagaacaagaaggacgtt
ccggactccttttacccagccatgagacttattcttcctcagttagagagagagaggatg
gcttatggtatcaaagaaaccatgcttgccaagctttacatcgagttactgaacttacca
agggaaggcaaggacgccctgaagctcctcaattatcgaacaccgactggcgctcgcacg
gatgctggggactttgcgatgattgcgtacttcgtgttaaagccgcggtgcttacagaaa
ggaagcttaaccatacagcaggtgaatgaactcttggacttagtcgccagcaacaattct
ggcaaaagaaaagacctagtaaagaagagccttctccagttgatatcacagagttcagcc
ctggagcaaaagtggctgatccgcatgatcattaaagacttaaagcttggtgtcagtcag
caaacgatacttaacgtttttcataacgacgcagttgagttgcacaacgtcaccacggat
ctgcagaaggtctgccagcaactccatgacccctccatagggctcagtgatatctctatc
agcctcttttctgcctttaagccgatgctagccgccgtagccgatgtggagcgcgtggaa
aaggacatgaagcagcagagtttctacattgagaccaagctggacggcgaacgcatgcag
atgcacaaagatggggaagtgtatcagtacttctccagaaacggctataactacaccgat
cagtttggcgcatccccccaggaaggctccctcacccccttcatccacgatgccttccgc
acagatgtgcaagagtgcatcctcgacggcgagatgatggcctacaacccgaccacacag
acgttcatgcagaagggggtcaagtttgacatcaagaggatggtggaggattccgacctg
cagacgtgttactgtgtcttcgacgtgttgatggttaataataagaagctagggcgtgag
accctgaggaagagatatgagatccttagcaatactttgacacccatccagggtcgaata
gagatcgtgcagaaaaagctagctcacacgaagaatgaggtggtggatgccttaaatgaa
gccattgataacagagaggagggcatcatggttaaacaccctctgtcaatttacaagcca
gacaaaagaggtgaagggtggctaaaaattaaaccagagtatgtcactggattaatggat
gaattagatctcttaattgtggggggctactggggtaaaggttctcgaggcggcatgatg
tctcactttttgtgtgcggtggcagaggcgccgcctcacggtcagaggccatctgtgttc
cattctctgtgccgtgttgggtcaggatacaccatgaaggagctctatgaccttggcctg
aaattggccaaacattggaagccttaccataagaaatctccaccgagtagcattttatgc
ggcacagagaagccggaagtgtacatcgagccccatcactccgtgattgtccagatcaag
gcggcagagatcgtccccagtgacatgtacaagactgggaccacactgcgcttcccacgc
atcgagaagatcagagatgacaaggagtggcatgagtgtatgaccctgggtgacctggaa
gaactgagggggagagcatccgggaagcttgccacaaagcaccttcatgtcggtgacgat
gatgaacctagagaaaagaggcggaaacccgtttccaaaatgaagaaaaccatcggaatt
atcgaacacttgaaagcacctaacctctctaatgtaagtaaggtttctaatgtatttgag
gacgttgagttttgcgttatgactggggtggagggttatcccaagcctgacctggagaac
agaattgcagaacttggtggctgcgttgtgcagaatccaggcccagaaacgtactgtgtg
atcgcagggtgcaggaacatcagagtgaggaacattatctcctctgacgaacacgatgtt
gtcaagcccgagtggctgctggagtgttttaaaacaaaaacgtgtgtgccatggcagcct
cgcttcatggttcacatgtgcccgtcaacaaagcagcactttgcccgtgaatatgattgc
tacggtgatagctattttgttgatacagatttggatcaactgaaagaagtgttttcagga
attaaacccagggagcggcagactcctgaagaaatggcccccgtgatcgccgacctagaa
taccgctattcctgggatcactctcctctcagtatgtttcggcattgcaccgtgtatctg
gacttgtatgctgttgtcaacgacttgagctccaaaatcgaagcaacgagattaggtgtg
acagcgcttgagctgcggtttcatggagccagggtagtgtcctgcttatctgagggggtg
tctcatgtgatcgttggggaagatccgagccgagttgcagacttcaaagctttcaggagg
actcttaagaaaaagtttaaaatcctgcaagaacattgggtgaccgattcagtagacaag
tgtgagcttcaggatgaaagtcggtatttgctctag
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