Microtus oregoni (creeping vole): 121464217
Help
Entry
121464217 CDS
T08307
Symbol
Scn10a
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
morg
Microtus oregoni (creeping vole)
Brite
KEGG Orthology (KO) [BR:
morg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
morg04040
]
121464217 (Scn10a)
Ion channels [BR:
morg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
121464217 (Scn10a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
Na_trans_cytopl
GPHH
CcmD_alt
IQ
Motif
Other DBs
NCBI-GeneID:
121464217
NCBI-ProteinID:
XP_041532879
LinkDB
All DBs
Position
Unknown
AA seq
1959 aa
AA seq
DB search
MEFPFGSVETTTFRRFTPESLAEIEKQIEAHRAAKKAKAKRGEQKGQDEKPRPQLDLKAC
NQLPRFYGELPAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALFLFSPFNLIR
RTAIKVSVHSWFSKFITITILFNCVCMTQSDLAEKIETAFTVIYTFEALIKILASGFCLN
EFTYLRDPWNWLDFSVITLAYVGAAKDLRGISGLRIFRVLRALKTVSVIPGLKVIVGALI
HSVRKLADVTILTAFCLSVFALVGLQLFKGNLKNKCIRNGTDPHKAHNFSAEMADNYYIK
NGTTDPLLCGNGSDAGHCPSGYICLKTSENPDFNYTSFDSFAWAFLALFRLMTQDSWERL
YQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIAEIEAKEKKFQEA
LEVLQKEQEVLAALGIDRTSLPSHNGSPLAPINSHERKHRMKSRVSEGSTDDNRSPQSEP
YNQRRMSFLGLSSGRRRASHGSVFHFRVPGQDVSFPDGITDDGVFHGDQEGHRGSLLLSR
GAGQAGPLPKSPLLRSPKPGPGHGEEGPLTLPTGELAAGGPEGLALEAAGQKKNYLSAEY
LNEPFRAQRAMSVVSIMTSVIEELEDSKLRCPPCLLSLAQKCLIWECSPKWIKFKMVLFE
LVTDPFAELTITLCIVVNTVFMAMEYYPMTEAFEAMLQAGNIVFTVFFTMEMAFKIIAFD
PYYYFQKKWNIFDCVIVTVSLLELSIAKKGSLSVLRTFRLLRVFKLAKSWPTLNMLIKII
GNSVGALGNLTFILAIIVFIFALVGKQLLGEYYGCKDGVALWKDEKLRWHMCDFFHSFLV
IFRILCGEWIENMWVCMEVGEKSICLILFLTVMVLGNLVVLNLFIALLLNSFSADNLTAP
EDDGEVNNLQVALARIQAFGHRSSQAISSYFRSHCWLLWPKVEPQLGVKPSLPNSKAENH
IAADAVNNAVGSPAKPALNGPKEDHRDFITDANVWVSVPIAEGESDLEELEEDIEQNSQS
SWKEESPKGEQAQLPEEQRHEGLEVPKSPGSGMSSEDLAPYLGDRWKGDCTPQVPAEGED
DTSSSEGSTVDCPDPEAILRKIPELADELDQPDDCFTEGCTRHCPCCKVNTSKFPWATGW
QLRKTCYRIVEHSWFESFIIFMILLSSGALAFEDNYLDQKPRVKAMLEYTDRVFTFIFVL
EMLLKWVAYGFKRYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALRPLR
ALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNFFAGKFSKCIDTSDNPFS
IVNSSLVTNKSDCYNQNYTGNYFWVNVKVNFDNVAMGYLALLQVATFKGWMEIMYAAVDS
REMINSQPQWEYSLYMYIYFVVFIIFGGFFTLNLFVGVIIDNFNQQKKKIRGQDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPRNKYQGFVFDIVTRQAFDIAIMVLICLNMVTMMVETD
DQSEEKTKVLGGINQFFVAVFTGECVLKMIALRQYYFTNGWNVFDFIVVILSIGSLVFSA
ILTSLENYFSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLFLVM
FIYSIFGMASFANVVEEAGIDDMFNFKTFGNSMLCLFQITTSAGWDGLLSPILNTGPPYC
DPNLPNSNGSRGNCGSPAVGIVFFTTYIIISFLIVVNMYIAVILENFNVATEESTEPLSE
DDFDMFYETWEKFDPKATQFIAFSALSDFADTLSGPLRIPKPNQNILIQMDLPLVPGDKI
HCLDILFAFTKNVLGESGELDSLKTNMEEKFMATNLSKESYEPIATTLRWKQEAISATVI
QKAYRSYVLQRSLTLSNPLIVPRAEEDDGPLPGEGYVPFIANNGGGLPDKSETASATSFP
PSYDSVTRGLSDRVNISTSSSMQNEDEVTSKEGNSPEPQ
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccctttgggtccgtggaaactactaccttccggcggttcactccggagtcg
ctggcagagatcgagaagcaaattgaggcccaccgtgcggccaagaaggccaaagctaag
cgtggagagcagaagggccaggatgagaagcccaggcctcagctagacttgaaagcctgc
aaccagctgcccaggttctatggtgagctccctgcggaactggttggggagcccctggag
gacctagacccgttctacagcacacaccggacattcatggtgttgaataaaggcaggacc
atttccaggttcagtgccactcgggcgctgtttctcttcagtcccttcaacctgatcaga
agaaccgccatcaaggtgtccgtccactcctggttctccaaattcattaccatcacgatt
ttgttcaactgtgtatgcatgacccaaagcgatcttgcggagaaaatcgagaccgccttc
actgtcatttacaccttcgaagctctgataaagatactggcaagcggattttgtctaaat
gagttcacttatctgcgagatccctggaactggctggatttcagcgtcattaccctagcg
tatgtcggggcagcaaaagacctccgaggaatctcaggcctacggatattccgagttctc
agagccctgaaaactgtttctgtgatcccaggactgaaggtcattgtgggagccctgatc
cactcagtgagaaagttggctgacgtgaccatcctcaccgccttctgcctcagtgtcttt
gccttggtgggcctgcagctcttcaaggggaacctgaagaacaaatgcatcaggaacggc
acggatccccacaaggctcataatttctcagcagaaatggcagacaactactacatcaag
aatggaactactgaccctttgttatgcggcaatggatctgatgccggtcactgccccagt
ggttacatctgcctgaaaacatccgaaaatccggattttaactacaccagctttgactcc
ttcgcgtgggccttcctcgcgttgttccgcctcatgacacaagactcctgggagcgtctg
taccagcagacactccgggcctctgggaaaatgtacatggtcttctttgtgctggtcatc
ttcctcggatcattctacctggtcaatttgatcttggctgtggttaccatggcgtatgag
gagcagaaccaggcaacaatcgcggaaatcgaagccaaggaaaagaagttccaggaagcc
cttgaagtgctgcagaaggaacaggaggtactggcagccctggggatcgacaggacctca
ctcccttcccacaatggatcaccgctagcccccataaactcccatgagagaaaacacaga
atgaaatcaagggtgtcagagggctctacagatgacaaccggtcaccccaatctgagcct
tacaatcagcgcaggatgtctttcctaggcctttcttctggaagacgaagggctagccat
ggcagtgtgttccacttccgagtacctggccaagatgtctcatttcctgatgggatcaca
gatgacggagtctttcacggggaccaagaaggccatcgaggttccctgttgctgagcagg
ggtgctgggcaggcaggtcctctccccaagagcccactgcttcggtctcccaagcctggt
cctggacatggggaagagggaccgctcacactgcccactggtgagcttgccgctggaggt
cccgaaggcctggcacttgaggctgcaggacagaagaagaattatctgtctgcagaatac
ttgaacgagcctttccgcgcacagagggcgatgagcgttgtcagtatcatgacttctgtc
attgaggaacttgaagattctaaactgaggtgcccgccctgcttgctcagcttggctcag
aagtgtcttatctgggagtgcagccccaagtggataaagttcaagatggttctcttcgag
ctggtgaccgatccctttgctgagctcaccatcaccctctgcattgtggtgaacaccgtc
ttcatggccatggagtactaccccatgaccgaggccttcgaggccatgctccaagccggc
aacattgtcttcacggtgtttttcacgatggagatggccttcaagatcattgccttcgac
ccctactactacttccagaagaagtggaacatctttgactgtgtcatcgtcaccgtgagc
ctgctggagctgagcatagccaagaagggcagcttgtctgtgctccgcaccttccgtttg
ctgcgggtcttcaagctggccaagtcctggcccaccctgaacatgctcatcaagatcatc
ggcaactcagtgggggcgctgggcaacctgaccttcatcctggccatcatcgtcttcatc
ttcgccctggtcggaaagcagcttctcggggagtactacgggtgcaaggacggcgtcgct
ctgtggaaggacgagaagcttcgctggcacatgtgtgacttcttccattccttcctcgtc
atcttccggatcctgtgcggggagtggattgagaacatgtgggtctgcatggaagtcggc
gagaaatccatctgcctcatcttgttcttgactgtgatggtgctggggaacctggtggtg
ctcaaccttttcatcgccttgctgctgaactccttcagtgctgacaatctcacagccccg
gaggatgatggggaggtcaacaacttgcaggtagcattggccaggattcaggcatttggc
catcggtccagtcaggccatttccagttacttcaggagccactgctggctcctctggcca
aaggtggagccccagctcggggtaaaaccctccctccccaactccaaagctgagaaccac
attgctgctgatgccgtcaacaatgcagtggggagcccagcaaagccagctctcaacggc
cccaaggaagaccacagggacttcatcaccgatgctaacgtgtgggtctcagtccccatt
gccgagggagaatctgatctcgaggagctcgaggaagacattgaacagaattctcagagc
tcttggaaggaagagagccccaaaggagagcaggcacagctgccggaagaacaaaggcac
gaaggccttgaagtgcctaagagcccaggctctgggatgtcctcggaggacctggctccg
tacctgggtgacagatggaagggtgactgcacccctcaggtccctgctgagggagaggac
gacacaagctcttctgagggcagcacagtggactgcccggatccagaggcaatcctcagg
aagatccctgagctggcagacgagctggatcagccagatgactgcttcacagaaggctgc
actcgccactgcccctgctgcaaagtgaataccagtaagtttccgtgggccacgggctgg
cagttgcggaagacctgctaccgcatcgtggagcacagctggttcgagagtttcatcatc
ttcatgatcctgctcagcagtggagcgctggcctttgaggataactacctggatcaaaag
ccccgagtgaaggctatgctggagtacaccgacagagtgttcaccttcatctttgtgttg
gagatgctgctcaagtgggtagcttatggcttcaaaagatatttcaccaatgcctggtgc
tggctggacttcctcattgtgaatatctccctgacaagcctcatagccaagatcctcgaa
tattcggatgtggcgtccatcaaagcccttcggactctccgcgctctccggccactgcgg
gctctgtctcgattcgaaggcatgagggtagtggtggatgcgctggtgggcgccatcccc
tccatcatgaacgtcctccttgtctgcctcatcttctggctcatcttcagcatcatgggc
gtgaacttctttgcggggaaattttcaaagtgcatcgacaccagcgataatccgttttct
attgtgaattcaagccttgtgacaaataagtctgactgttacaaccaaaactacaccgga
aactacttctgggtcaacgtgaaagtcaactttgacaatgttgctatgggttacctggct
cttcttcaggtggcaaccttcaaaggctggatggaaattatgtatgctgctgtggattcc
agagagatgatcaacagccagcctcagtgggagtacagcttgtacatgtacatatacttc
gtcgtcttcatcatctttggtggcttctttacgctgaatctctttgttggggtcataatt
gacaacttcaatcaacagaaaaaaaagataaggggccaggacatcttcatgacggaggag
cagaagaagtactacaacgccatgaagaagctgggctccaagaagccccagaagcccatc
ccgcggcccaggaataagtaccagggctttgtgtttgacatcgtgaccaggcaagctttt
gacatcgccattatggtcctcatttgcctcaacatggtcaccatgatggtggagactgac
gaccagagtgaagagaagaccaaggtcctgggtgggatcaatcagttcttcgtggccgtc
ttcacgggcgagtgtgtgctgaagatgatcgccctgcggcagtactacttcaccaacggc
tggaatgtgtttgacttcatcgtggtcatcctgtccattgggagtctggtgttttctgca
atccttacgtcacttgaaaattacttctccccgacactcttccgggtcatccgtctggcc
agaatcggccgcatcctcaggctgatccgagcggccaaggggatccgcacactgctcttc
gccctcatgatgtccctgcccgccctcttcaacattggcctcctgctcttcctcgtcatg
ttcatctactccatcttcggcatggccagcttcgccaatgttgtggaagaggctggcatt
gacgacatgttcaacttcaagaccttcggcaacagcatgctgtgccttttccagatcacc
acatcagccggctgggacggcctcctcagccccatcctcaacacggggcccccatactgt
gaccccaatctgcccaacagcaatggctcccgggggaactgtgggagcccagcagtgggc
attgtcttcttcaccacctacatcatcatctccttcctcatcgtggtcaacatgtacatc
gccgtgatcctggagaacttcaatgtggccacggaagagagcacagagcccctgagtgag
gatgactttgacatgttttatgagacctgggagaagttcgaccccaaggccactcagttc
attgccttttctgccctctcggactttgcagacacactctccggccctcttagaatccca
aagccaaaccagaacatattgatccagatggacctgccactggtccctggagataagatc
cactgtttggacatcctctttgccttcacgaagaatgtcttgggagaatctggagagttg
gattctctgaagactaatatggaagagaaatttatggccactaatctttccaaagagtcc
tatgaaccaatagcaaccaccctccgatggaagcaggaagccatctcagccactgtcatt
caaaaggcctatcggagctatgtgttacaacgctccttgacgctctccaacccccttatt
gtacccagggctgaagaggacgatggaccactccctggtgaaggctatgttccattcata
gcaaataatggtggagggctcccagacaaatcagaaactgcttctgccacatctttccca
ccatcctatgatagtgtcaccaggggcctgagtgacagggtcaacattagtacatccagc
tcaatgcaaaatgaagacgaagtcaccagtaaggaggggaacagccctgaacctcagtga
DBGET
integrated database retrieval system
