Mycobacterium ostraviense: LTS72_14660
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Entry
LTS72_14660 CDS
T07946
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mot
Mycobacterium ostraviense
Brite
KEGG Orthology (KO) [BR:
mot00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LTS72_14660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mot03021
]
LTS72_14660
Transcription machinery [BR:
mot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LTS72_14660
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
UGT89685
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Position
3218883..3220451
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AA seq
522 aa
AA seq
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MAATRASQATGEPVKRTATKSPAKAGAKRPAAKTANGATPAKRATKAAGRSTKAADAASD
AETTAPKKSRTAAKAAKAPPRDADTFGETLEGAATDPAVALDAAEDLDDEPDLDVDPVED
LDLEAGLGLDDLEDDVEDDVEGDVVAAVVDDGDLDPTDVEDTNEVESPAVAAPGSAVDDE
EEIAEPTEKDKASGDFVWDEDESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEE
VELAKRIEAGLYATQLMAEMAERGEKLPAAQRRDMMWICRDGDRAKNHLLEANLRLVVSL
AKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTI
RIPVHMVEVINKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQT
IGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQSVLDTLSEREAGVVRLRFGLTDGQP
RTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgaccagggccagtcaggcgaccggtgagccggtgaagcgcaccgccaccaag
tccccggccaaagccggcgccaagcgaccggcggcaaagacagccaatggcgctaccccc
gcgaagcgggccaccaaggcggcgggccggtccacaaaggccgccgatgccgccagcgac
gccgagaccaccgctccgaagaaaagccgtaccgcggcaaaagccgcaaaggccccgccc
cgtgacgccgacacgttcggcgagacactcgaaggcgcggccacggacccggccgttgcg
ctcgatgccgccgaagacctcgacgatgagccagaccttgacgtcgaccccgtcgaggac
ctcgatctggaggccggtctcggccttgacgacctggaagacgacgtggaagacgacgtg
gaaggcgacgtcgtcgccgccgtcgtcgacgacggcgacctcgatcccaccgacgtcgag
gacaccaacgaggttgaatctccagctgttgcagcgcccgggagcgccgtcgatgacgag
gaggagatcgccgagcccaccgagaaggacaaggcctcaggcgatttcgtatgggacgag
gacgagtcggaagcgttgcgccaagcgcgcaaagacgccgaactcaccgcctccgcggac
tcggttcgcgcctacctcaagcagatcggcaaggtggcgctgctcaacgccgaggaagag
gtcgagctggccaaacggatcgaggccggcctctacgccacgcagctgatggcggagatg
gcagagcgcggcgagaagctgcccgccgcgcaacgtcgcgacatgatgtggatttgccgc
gacggcgatcgcgcgaaaaaccatctgctggaggccaacttgcggctggtggtttcactg
gccaagcgctacaccgggcgcgggatggcgttcctggacttgatccaggaaggcaacctg
ggcttgatccgggcggtggagaagttcgactacaccaagggttacaagttctccacctac
gcgacctggtggatccgccaagccatcacccgcgccatggccgaccaggcccggaccatc
cgtatcccggtgcacatggtcgaggtgatcaacaagctcggccgaatccagcgtgagctc
ctgcaggacctgggccgcgagcccacccccgaggaactggccaaagagatggacatcacc
ccggagaaggtgctcgagatccagcaatacgcccgggagccgatctcgttggaccagacc
atcggcgacgagggcgacagccagctgggcgacttcatcgaggacagcgaagcggtggtg
gccgtggacgcggtgtcgttcacgctgctgcaagaccagctgcagtcggtcctggacacg
ctgtccgagcgcgaggccggcgtggtacggctgcgcttcggcctcaccgacggccagccg
cgcaccctcgacgagatcggccaggtatacggcgtgacccgggagcgcatccggcagatc
gagtccaagaccatgtcgaaattgcgccaccccagccgctcgcaagtcctgcgcgactac
ctggactga
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