KEGG   Methanogenium organophilum: OU421_03895
Entry
OU421_03895       CDS       T08653                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mou  Methanogenium organophilum
Pathway
mou03030  DNA replication
mou03410  Base excision repair
mou03420  Nucleotide excision repair
mou03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mou00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OU421_03895
   03410 Base excision repair
    OU421_03895
   03420 Nucleotide excision repair
    OU421_03895
   03430 Mismatch repair
    OU421_03895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mou03032]
    OU421_03895
   03400 DNA repair and recombination proteins [BR:mou03400]
    OU421_03895
Enzymes [BR:mou01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     OU421_03895
    6.5.1.6  DNA ligase (ATP or NAD+)
     OU421_03895
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     OU421_03895
DNA replication proteins [BR:mou03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    OU421_03895
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     OU421_03895
DNA repair and recombination proteins [BR:mou03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     OU421_03895
   NER (nucleotide excision repair)
    Other NER factors
     OU421_03895
   MMR (mismatch excision repair)
    Other MMR factors
     OU421_03895
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: WAI02022
UniProt: A0A9X9T9E4
LinkDB
Position
complement(745906..747546)
AA seq 546 aa
MDFLDFSHICDALEGTAGRLDMTSIVQDVLPKLDEEDIPLFIRYLMGRPFPDWSPQKIGI
GPNSVYDAVAYVAGRDRRAVVAAVNRSGDPGRAVEELLAKKEQMSFFSESLTLTEIGRDF
TLLAATGGTKSQKEKDRVLRRLFGNASPLEGRYLARLLLGELRIGIGEGTMRDAIAGAFG
VNPAAVEHAHQAANDLGEVALLARTGEDALYAVHIEPFRPVKMMLAKQGTVTDMLREAGT
IAAEYKYDGTRFQFHKSGGVCRMYSRRLEEVTHAIPDVVAMLDAATPHDIILDGEVIAVR
DGRPLPFQYVLRRFRRKHNVDSHIEEITLAPNIFDILWVDGETLIDLPFTERRKRLEAAV
SDTYVAPQLVSGDEDEIAALYRRALEEGHEGIMIKDPRSPYTPGVRGKLWVKIKPAVDTI
DLVVTGAEWGEGKRAHIFGSFLLSCLGEDGSFIPLSKVATGFSDEALQEMYAALSDLVIS
EEGKMVRVEPQIVVEVGYAEIQKSPNYTGGFALRFPRFIRMRDDKSPEEIESLRMIEERF
AAQSAR
NT seq 1641 nt   +upstreamnt  +downstreamnt
atggattttctggatttttctcacatatgtgatgcactggaaggaaccgccggacggctc
gatatgacgtcaatcgtacaggatgttctgccgaaactggatgaggaggatattcccctt
tttatccgctacctgatgggacggcccttcccggactggagcccgcaaaagatcgggatc
ggcccgaacagtgtctatgatgcagtcgcctatgtggcaggcagggatcgccgggcggtt
gtcgctgccgtcaatcgcagtggagatcccggccgggcggttgaggagctgcttgcaaaa
aaagagcagatgtcctttttttccgagtcactgacactaactgagatcgggcgtgacttc
acactccttgctgcaaccggcggcaccaaatcccagaaggagaaggaccgggtactccgc
aggctctttgggaacgcttcccccctcgaaggacgataccttgcccgcctgcttctgggg
gaactcaggatcggtatcggagaggggacaatgcgggatgccattgcaggggcctttgga
gtgaatcctgccgctgtagagcatgcccatcaggcggcaaatgatctgggagaggtggca
ctcctcgcacgcaccggtgaggacgccctgtatgccgtccatatcgagccgttccgtccg
gtgaagatgatgcttgccaaacagggaactgtcacggatatgctccgtgaagcgggcacc
atcgctgctgaatacaaatatgacggcacgcggttccagttccataaatcgggtggtgtc
tgccggatgtactcccggaggctggaagaggtaacccatgcgattcccgatgtggtggca
atgcttgatgcagcgacacctcacgacatcatcctcgatggagaggttattgctgtccgt
gacggtcgcccactccctttccagtatgtactccgccgcttccgccgcaaacataatgtt
gactcccatattgaggagattacccttgccccgaatatttttgacattctctgggtggat
ggtgagacgctcattgaccttcccttcacagaacgccggaaacgactggaggcggctgta
tctgacacctatgttgcgccgcagctggtgagtggggatgaagacgagattgccgcactc
taccgcagagcactcgaagaagggcacgaaggcattatgatcaaagacccccgctccccg
tatactccgggtgtgcgtggcaaactctgggtgaagatcaaaccagcggtggacaccatt
gatctggtggtcaccggcgcggagtggggtgaaggaaaacgggcgcatatctttgggtca
tttcttctctcctgtctgggtgaggatgggtcattcatcccgctctccaaggtggcgacc
ggattttccgatgaggctctgcaggagatgtatgcagccctctctgatcttgtcatctca
gaagagggaaaaatggtccgtgtcgagccgcagattgtggtggaagtgggctatgcggaa
attcagaagagcccgaattacaccggcggatttgccctgcggttcccccggtttatccgg
atgcgggatgataaaagcccggaggagatagagtccctccggatgattgaagaacggttt
gcggcccagtccgctaggtga

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