Microbacterium oxydans: CVS54_02376
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Entry
CVS54_02376 CDS
T06672
Symbol
rfbC_1
Name
(GenBank) putative dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
moy
Microbacterium oxydans
Pathway
moy00521
Streptomycin biosynthesis
moy00523
Polyketide sugar unit biosynthesis
moy00541
O-Antigen nucleotide sugar biosynthesis
moy01100
Metabolic pathways
moy01110
Biosynthesis of secondary metabolites
moy01250
Biosynthesis of nucleotide sugars
Module
moy_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
moy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CVS54_02376 (rfbC_1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CVS54_02376 (rfbC_1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CVS54_02376 (rfbC_1)
Enzymes [BR:
moy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
CVS54_02376 (rfbC_1)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CVS54_02376 (rfbC_1)
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Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
AZS41031
UniProt:
A0A3Q9J4G2
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All DBs
Position
2436010..2437428
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AA seq
472 aa
AA seq
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MTEYGKTLGSTTTPIPGLLVWDLPVHGDNRGWFKENWQREKMVAAGLPDFGPVQNNISFN
DEIGTTRGIHAEPWDKWVSVATGRVFGAWVDLREGPSFGAVFTAEIDPSVAVFVPRGVGN
SYQTLEVDTSYCYLVNDHWSPDTAYSFLNLADETAAIDWPIALEDAAVSDKDRAHPRLAD
VRRVAPRKTLVLGSNGQLGRALRDLLSDRTDVEFTDRTTLDLLDPELYRAREWSEYSTVI
NAAAYTAVDHAETPSGRRTAWAANVDGVRRIAEIARAHRLTLVHVSSDYVFDGTNDDAYA
EGDAIAPLGVYGMTKAAGETAAVVAPRHYIVRTSWVVGDGDNFVKTMASLARRGIDPRVV
DDQRGRLTFADELARGILHLIESAPAYGIYNLTGAGDPQTWADIARSVFELTDSDPTRIT
GVTTEEYYEGAAQPVSPRPSNSVLDLAKIRATGFVPADMRASLEAYLAELAE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgactgagtacggaaagaccctgggttcgacaacgactccgatcccggggctcctggtc
tgggacctccccgtgcacggggacaaccgtggatggttcaaggagaactggcagcgcgag
aagatggtcgctgccggtctccccgatttcgggcccgtccagaacaacatctcgttcaac
gatgagatcgggacgaccagagggatccacgcggagccgtgggacaagtgggtctccgtt
gcgaccggacgggtgttcggggcgtgggtggatctgcgcgagggcccctcgttcggcgcg
gtcttcactgccgagatcgatccttcggtcgcggtgttcgttccgcggggcgtcgggaac
tcgtaccagaccctcgaagtcgacacgtcctactgctacctcgtcaacgaccactggtcg
ccggacaccgcgtacagcttcctcaacctcgccgacgagacggcagcgatcgactggccc
atcgccctcgaggatgcagccgtcagcgacaaggatcgcgcccacccgcgtctcgccgat
gtgcgtcgcgtcgcaccgcgcaagactctcgtcctcggcagcaacggacagctgggccgt
gcgctccgcgacctgctgagcgacaggacggatgtcgagttcaccgaccggaccacgttg
gatctgctcgacccggagctatatcgtgcgcgtgagtggagcgagtactcgacggtgatc
aacgcggccgcgtacaccgcggtcgatcatgcggagacgccgtccggacgacggacggca
tgggcggcgaatgtggacggcgtccgccgcatcgccgagatcgccagggcgcatcggctc
actctggtgcacgtgtccagtgactacgtgttcgacggcaccaacgacgatgcgtacgcc
gaaggcgatgcgatcgctccgctcggcgtctacggcatgacgaaggcggccggagagacg
gcagctgtggtcgcgccacggcactacatcgtccggaccagttgggtggtcggagacggc
gacaacttcgtcaagacgatggcatcgctcgcacggcgcgggatcgacccccgcgtcgtg
gatgatcagcgcggtcgtctgaccttcgctgacgaactcgctcgcggaatcctccacctg
atcgagtcggctccggcctatggaatctacaatctgaccggcgccggcgatccgcagacc
tgggccgacatcgcccgctccgtcttcgagctgacggacagtgatccgacacgcatcacc
ggcgtcaccacggaggaatactacgagggggcggcacagccggtctctccgcgaccgagc
aacagcgtgctggatctcgcgaagatccgtgccacaggcttcgtgccggctgacatgcgc
gcgtcgctcgaagcgtacctcgcagagctggctgagtag
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