Microbacterium oxydans: CVS54_02961
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Entry
CVS54_02961 CDS
T06672
Symbol
ramB
Name
(GenBank) HTH-type transcriptional regulator RamB
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
moy
Microbacterium oxydans
Brite
KEGG Orthology (KO) [BR:
moy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
moy03000
]
CVS54_02961 (ramB)
Transcription factors [BR:
moy03000
]
Prokaryotic type
Helix-turn-helix
XRE family
CVS54_02961 (ramB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_31
HTH_3
HTH_19
HTH_26
Peptidase_M78
ScfRs
Motif
Other DBs
NCBI-ProteinID:
AZS41602
UniProt:
A0A147DVT7
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All DBs
Position
complement(3035550..3037001)
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AA seq
483 aa
AA seq
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MSTIDAAEETDALTIGRRIRQLRTAKGMTLDDLASAVDRAPSQMSMIETGKREPKLTQLQ
AIARALGVTIDALLEGEPLDERSAVEIALERAMKGQTFQALGIEPFRIAKSLPTDALKAL
LALHGEIDRLKDERAATPEEARRANVELRHLMRRQDNHFADLETKAAEILAAVGHPGGPL
TQRTASEIAAYLGFTLHYAPDLPQTTRSVADLANGRLYLSSSVPAKGDARTAVLQALSSR
ILGHSEPRSYAEFLRQRVETNYLTGALLIPEAHVVPALKDAKQRRAISIEDLRDGYSVSY
ETAAHRFTNLATRHLDIPVHFLKVHESGTITKAYENDDVNFPTDRLGAIEGQMCCRRWTS
RVVFDEDDRFNPYYQYTDTGNGTYWCTARVESSSEGLHSVSVGVRFDDTKWFVGRDTSHR
GVSKHSVEVCCRRAPADLEDRWRENSWPNVKTPRTLLATLPTGAFPGVDTTDVYEFLEAH
APR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatcgacgctgcagaagagaccgacgccctcacgatcggccgccgcatccgc
cagctccgtacggcgaaggggatgaccctcgacgacctcgcctccgccgtcgaccgggcg
ccgagtcagatgtcgatgatcgagaccggcaagcgcgagccgaagctcacgcagctgcag
gcgatcgcccgggctctcggggtcacgatcgacgcgctgctggaaggcgagccgctcgac
gaacgcagcgcggtcgagatcgccctggagcgggcgatgaagggccagacgttccaggcc
ctgggcatcgagccgttccgcatcgcgaagagtctgcccacggatgcgctgaaggcgctg
ctcgctctgcacggcgagatcgacaggctcaaggacgagcgggccgcgacgcccgaagaa
gctcgccgggcgaacgtcgagctgcggcacctgatgcggcggcaggacaaccacttcgcc
gacctcgagacgaaggccgccgagatcctcgccgcggtcggtcaccccggcggcccgctg
acgcagcgcaccgcatccgagatcgcggcctacctgggcttcaccctgcactacgcgccc
gacctgccgcagaccacccgcagcgtcgccgacctcgccaacggcaggctctacctctcc
agcagtgtgccggcgaagggcgatgcccgcaccgcggtgctgcaggcgctgtcgagtcgc
atcctcgggcactccgaaccacgcagctacgccgagttcctgcgtcagcgcgtcgagacg
aactacctcaccggcgccctgctcatcccggaggcgcacgtcgtccccgccttgaaggac
gccaagcagcggagggcgatctcgatagaagacctgcgtgacggatactcggtgtcgtac
gagacggcggcgcaccgcttcacgaacctcgcgacccggcacctcgacatcccggtgcac
ttcctcaaggtgcacgagtcgggcaccatcaccaaggcgtacgagaacgacgacgtgaac
ttcccgaccgaccggctcggggccatcgaggggcagatgtgctgccgccggtggacctcg
cgcgtggtgttcgatgaagacgaccgcttcaacccgtactaccagtacaccgacaccggc
aacgggacgtattggtgcaccgcccgggtggagtcgtcgagcgaggggctgcactcggtg
agcgtgggagtgcgcttcgacgacacgaagtggttcgtggggcgtgacacctcgcatcgc
ggcgtctcgaagcattcggtcgaggtgtgctgccgtcgggctcccgccgatctggaggac
cgctggcgcgagaactcgtggcccaacgtgaagaccccgcgcacgctgctggcgaccctg
cccaccggagccttccccggcgtcgacacgaccgacgtgtacgagttcctggaggcgcac
gcaccgcggtga
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